RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 NXNL1Q96CM4 212 aa14.31□□□□□ -0.12
CHD3-205ENST00000449744 SERINC2Q96SA4 455 aa14.31□□□□□ -0.12
CHD3-205ENST00000449744 ATOH8Q96SQ7 321 aa14.31□□□□□ -0.12
CHD3-205ENST00000449744 NPAS2Q99743 824 aa14.31□□□□□ -0.12
CHD3-205ENST00000449744 ROGDIQ9GZN7 287 aa14.31□□□□□ -0.12
CHD3-205ENST00000449744 KLHL1Q9NR64 748 aa14.31□□□□□ -0.12
CHD3-205ENST00000449744 PNO1Q9NRX1 252 aaKnown RBP14.31□□□□□ -0.12
CHD3-205ENST00000449744 IGSF5Q9NSI5 407 aa14.31□□□□□ -0.12
CHD3-205ENST00000449744 ZDHHC18Q9NUE0 388 aa14.31□□□□□ -0.12
CHD3-205ENST00000449744 ANGPTL3Q9Y5C1 460 aa14.31□□□□□ -0.12
CHD3-205ENST00000449744 HIVEP3Q5T1R4 2406 aa14.31□□□□□ -0.12
CHD3-205ENST00000449744 ICE1Q9Y2F5 2266 aa14.3□□□□□ -0.12
CHD3-205ENST00000449744 A0A1B0GUH1 482 aa14.3□□□□□ -0.12
CHD3-205ENST00000449744 K7EPI3 171 aa14.3□□□□□ -0.12
CHD3-205ENST00000449744 CDK2AP1O14519 115 aa14.3□□□□□ -0.12
CHD3-205ENST00000449744 MAN1A2O60476 641 aa14.3□□□□□ -0.12
CHD3-205ENST00000449744 C2P06681 752 aa14.3□□□□□ -0.12
CHD3-205ENST00000449744 EEF1DP29692 281 aaKnown RBP14.3□□□□□ -0.12
CHD3-205ENST00000449744 TDGF1P3P51864 188 aa14.3□□□□□ -0.12
CHD3-205ENST00000449744 HSD17B7P56937 341 aa14.3□□□□□ -0.12
CHD3-205ENST00000449744 KCNK10P57789 538 aa14.3□□□□□ -0.12
CHD3-205ENST00000449744 TBCCQ15814 346 aa14.3□□□□□ -0.12
CHD3-205ENST00000449744 ADPRMQ3LIE5 342 aa14.3□□□□□ -0.12
CHD3-205ENST00000449744 HIST2H2BCQ6DN03 193 aa14.3□□□□□ -0.12
CHD3-205ENST00000449744 SPINK14Q6IE38 97 aa14.3□□□□□ -0.12
CHD3-205ENST00000449744 ADNP2Q6IQ32 1131 aa14.3□□□□□ -0.12
CHD3-205ENST00000449744 MED27Q6P2C8 311 aa14.3□□□□□ -0.12
CHD3-205ENST00000449744 ABHD17CQ6PCB6 329 aa14.3□□□□□ -0.12
CHD3-205ENST00000449744 MAMDC2Q7Z304 686 aaPredicted RBP14.3□□□□□ -0.12
CHD3-205ENST00000449744 VN1R5Q7Z5H4 357 aa14.3□□□□□ -0.12
CHD3-205ENST00000449744 FAM47BQ8NA70 645 aa14.3□□□□□ -0.12
CHD3-205ENST00000449744 TMEM178AQ8NBL3 297 aa14.3□□□□□ -0.12
CHD3-205ENST00000449744 FAM98AQ8NCA5 519 aaKnown RBP14.3□□□□□ -0.12
CHD3-205ENST00000449744 MDS2Q8NDY4 140 aa14.3□□□□□ -0.12
CHD3-205ENST00000449744 SRFBP1Q8NEF9 429 aaKnown RBP14.3□□□□□ -0.12
CHD3-205ENST00000449744 MNS1Q8NEH6 495 aa14.3□□□□□ -0.12
CHD3-205ENST00000449744 QRFPRQ96P65 431 aa14.3□□□□□ -0.12
CHD3-205ENST00000449744 SIGLEC12Q96PQ1 595 aa14.3□□□□□ -0.12
CHD3-205ENST00000449744 F2RL3Q96RI0 385 aa14.3□□□□□ -0.12
CHD3-205ENST00000449744 DEFB126Q9BYW3 111 aa14.3□□□□□ -0.12
CHD3-205ENST00000449744 SNX15Q9NRS6 342 aa14.3□□□□□ -0.12
CHD3-205ENST00000449744 LRFN1Q9P244 771 aa14.3□□□□□ -0.12
CHD3-205ENST00000449744 SEC14L3Q9UDX4 400 aa14.3□□□□□ -0.12
CHD3-205ENST00000449744 ASB1Q9Y576 335 aa14.3□□□□□ -0.12
CHD3-205ENST00000449744 PCDHGB6Q9Y5F9 930 aa14.3□□□□□ -0.12
CHD3-205ENST00000449744 A0A096LPK6 155 aa14.29□□□□□ -0.12
CHD3-205ENST00000449744 CCDC189A1A4V9 331 aa14.29□□□□□ -0.12
CHD3-205ENST00000449744 SYNDIG1LA6NDD5 238 aa14.29□□□□□ -0.12
CHD3-205ENST00000449744 FCHO1O14526 889 aa14.29□□□□□ -0.12
CHD3-205ENST00000449744 MYO1DO94832 1006 aa14.29□□□□□ -0.12
CHD3-205ENST00000449744 UNC5CO95185 931 aa14.29□□□□□ -0.12
CHD3-205ENST00000449744 MLYCDO95822 493 aa14.29□□□□□ -0.12
CHD3-205ENST00000449744 STSP08842 583 aa14.29□□□□□ -0.12
CHD3-205ENST00000449744 PCNAP12004 261 aa14.29□□□□□ -0.12
CHD3-205ENST00000449744 GFAPP14136 432 aa14.29□□□□□ -0.12
CHD3-205ENST00000449744 EPB42P16452 691 aa14.29□□□□□ -0.12
CHD3-205ENST00000449744 EPORP19235 508 aa14.29□□□□□ -0.12
CHD3-205ENST00000449744 CD22P20273 847 aa14.29□□□□□ -0.12
CHD3-205ENST00000449744 CERS1P27544 350 aa14.29□□□□□ -0.12
CHD3-205ENST00000449744 TYK2P29597 1187 aa14.29□□□□□ -0.12
CHD3-205ENST00000449744 CASP2P42575 452 aa14.29□□□□□ -0.12
CHD3-205ENST00000449744 CLCN2P51788 898 aa14.29□□□□□ -0.12
CHD3-205ENST00000449744 IRF9Q00978 393 aa14.29□□□□□ -0.12
CHD3-205ENST00000449744 PMP22Q01453 160 aa14.29□□□□□ -0.12
CHD3-205ENST00000449744 RBPJQ06330 500 aa14.29□□□□□ -0.12
CHD3-205ENST00000449744 SLC25A25Q6KCM7 469 aa14.29□□□□□ -0.12
CHD3-205ENST00000449744 KLC3Q6P597 504 aa14.29□□□□□ -0.12
CHD3-205ENST00000449744 SCUBE1Q8IWY4 988 aa14.29□□□□□ -0.12
CHD3-205ENST00000449744 ZNF595Q8IYB9 648 aa14.29□□□□□ -0.12
CHD3-205ENST00000449744 MMGT1Q8N4V1 131 aa14.29□□□□□ -0.12
CHD3-205ENST00000449744 B3GNT7Q8NFL0 401 aa14.29□□□□□ -0.12
CHD3-205ENST00000449744 RHEBL1Q8TAI7 183 aa14.29□□□□□ -0.12
CHD3-205ENST00000449744 UBTD2Q8WUN7 234 aa14.29□□□□□ -0.12
CHD3-205ENST00000449744 KCNC2Q96PR1 638 aa14.29□□□□□ -0.12
CHD3-205ENST00000449744 TSPYL1Q9H0U9 437 aa14.29□□□□□ -0.12
CHD3-205ENST00000449744 NINJ2Q9NZG7 142 aa14.29□□□□□ -0.12
CHD3-205ENST00000449744 DAPP1Q9UN19 280 aa14.29□□□□□ -0.12
CHD3-205ENST00000449744 SPACA6W5XKT8 324 aa14.29□□□□□ -0.12
CHD3-205ENST00000449744 SVILO95425 2214 aa14.29□□□□□ -0.12
CHD3-205ENST00000449744 TRBV11-1A0A0K0K1C0 115 aa14.28□□□□□ -0.12
CHD3-205ENST00000449744 TBX6O95947 436 aaPredicted RBP14.28□□□□□ -0.12
CHD3-205ENST00000449744 MST1P26927 711 aa14.28□□□□□ -0.12
CHD3-205ENST00000449744 TPP2P29144 1249 aaPredicted RBP14.28□□□□□ -0.12
CHD3-205ENST00000449744 SERPINB1P30740 379 aa14.28□□□□□ -0.12
CHD3-205ENST00000449744 CYB561P49447 251 aa14.28□□□□□ -0.12
CHD3-205ENST00000449744 SERPINB8P50452 374 aa14.28□□□□□ -0.12
CHD3-205ENST00000449744 LIM2P55344 173 aa14.28□□□□□ -0.12
CHD3-205ENST00000449744 SRSF11Q05519 484 aaKnown RBP14.28□□□□□ -0.12
CHD3-205ENST00000449744 ACAP2Q15057 778 aa14.28□□□□□ -0.12
CHD3-205ENST00000449744 TERF2Q15554 542 aa14.28□□□□□ -0.12
CHD3-205ENST00000449744 MAPKAPK3Q16644 382 aa14.28□□□□□ -0.12
CHD3-205ENST00000449744 TMEM35AQ53FP2 167 aa14.28□□□□□ -0.12
CHD3-205ENST00000449744 C1QL3Q5VWW1 255 aa14.28□□□□□ -0.12
CHD3-205ENST00000449744 CHSY3Q70JA7 882 aa14.28□□□□□ -0.12
CHD3-205ENST00000449744 GALNTL5Q7Z4T8 443 aa14.28□□□□□ -0.12
CHD3-205ENST00000449744 CLNKQ7Z7G1 428 aa14.28□□□□□ -0.12
CHD3-205ENST00000449744 FJX1Q86VR8 437 aa14.28□□□□□ -0.12
CHD3-205ENST00000449744 MYLK4Q86YV6 388 aaPredicted RBP14.28□□□□□ -0.12
CHD3-205ENST00000449744 CENPLQ8N0S6 344 aaPredicted RBP14.28□□□□□ -0.12
CHD3-205ENST00000449744 TEX9Q8N6V9 391 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms