RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 SARS2Q9NP81 518 aaKnown RBP12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 C1orf109Q9NX04 203 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 NDRG4Q9ULP0 352 aaKnown RBP12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 POLR3HQ9Y535 204 aaPredicted RBP12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 PTPRSQ13332 1948 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 H7C4K7 107 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 WWP2O00308 870 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 ULK1O75385 1050 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 MTHFD2P13995 350 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 KCNQ1P51787 676 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 CLCN7P51798 805 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 CLCNKAP51800 687 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 AP1S2P56377 157 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 FLI1Q01543 452 aaPredicted RBP12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 ZNF169Q14929 603 aaPredicted RBP12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 RNF130Q86XS8 419 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 SLC37A3Q8NCC5 494 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 FBXO22Q8NEZ5 403 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 PSMG2Q969U7 264 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 PDXPQ96GD0 296 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 BARD1Q99728 777 aaKnown RBP12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 MYOCQ99972 504 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 PITHD1Q9GZP4 211 aaPredicted RBP12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 BACE2Q9Y5Z0 518 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 AP1M2Q9Y6Q5 423 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 TSPAN12O95859 305 aa12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 DGKAP23743 735 aa12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 DAPP51397 102 aa12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 ABHD18Q0P651 414 aa12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 GTF2H3Q13889 308 aa12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 PCBP2Q15366 365 aaKnown RBP eCLIP12.93□□□□□ -0.342e-7■■■■■ 41.9
SYNGAP1-204ENST00000449372 COL28A1Q2UY09 1125 aa12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 ALG1LQ6GMV1 187 aa12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 TMPRSS9Q7Z410 1059 aa12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 TRIM69Q86WT6 500 aa12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 FUBP1Q96AE4 644 aaKnown RBP12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 TUBB1Q9H4B7 451 aa12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 GALNT9Q9HCQ5 603 aa12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 SAGE1Q9NXZ1 904 aa12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 LAMA2P24043 3122 aaKnown RBP12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 HMGA1P17096 107 aaKnown RBP12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 SLC6A4P31645 630 aa12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 RUNX1T1Q06455 604 aa12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 DUSP6Q16828 381 aa12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 WSCD2Q2TBF2 565 aa12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 MSANTD1Q6ZTZ1 278 aa12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 KRT73Q86Y46 540 aa12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 SLC29A3Q9BZD2 475 aa12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 TMEM245Q9H330 911 aa12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 LDAHQ9H6V9 325 aa12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 HEXA-AS1Q9H8Q6 139 aa12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 REEP1Q9H902 201 aa12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 GLS2Q9UI32 602 aa12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 DNMT3AQ9Y6K1 912 aaPredicted RBP12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 FABP12A6NFH5 140 aa12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 ATXN1LP0C7T5 689 aaKnown RBP12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 GPC1P35052 558 aa12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 MAP2K3P46734 347 aa12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 ZFP36L2P47974 494 aaKnown RBP12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 RPL38P63173 70 aaKnown RBP12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 MADCAM1Q13477 382 aa12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 PYDC2Q56P42 97 aa12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 GALNT10Q86SR1 603 aa12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 MIB1Q86YT6 1006 aa12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 OR10A6Q8NH74 314 aa12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 PROKR1Q8TCW9 393 aa12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 ZFPM2Q8WW38 1151 aa12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 SLC9A6Q92581 669 aa12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 ATOH1Q92858 354 aaPredicted RBP12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 PYURFQ96I23 114 aa12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 RADILQ96JH8 1075 aa12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 ZNF583Q96ND8 569 aa12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 OR52E6Q96RD3 313 aa12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 SEPT5Q99719 369 aaPredicted RBP12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 CNPPD1Q9BV87 410 aa12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 EXOSC4Q9NPD3 245 aaKnown RBP12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 DPP7Q9UHL4 492 aa12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 EIF2B4Q9UI10 523 aaKnown RBP12.93□□□□□ -0.34
SYNGAP1-204ENST00000449372 OR51F1A6NGY5 319 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 PRAMEF11O60813 436 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 CCNDBP1O95273 360 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 OLFM2O95897 454 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 APOC1P02654 83 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 ARSBP15848 533 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 FPR1P21462 350 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 SLC19A1P41440 591 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 PCDH1Q08174 1060 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 GTF2H2Q13888 395 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 C10orf120Q5SQS8 335 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 GTF2H2CQ6P1K8 395 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 SHQ1Q6PI26 577 aaKnown RBP12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 TMEM207Q6UWW9 146 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 ATG16L2Q8NAA4 619 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 KCT2Q8NC54 265 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 RANBP3Q9H6Z4 567 aaPredicted RBP12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 RC3H2Q9HBD1 1191 aaKnown RBP12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 SPATA6Q9NWH7 488 aaPredicted RBP12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 NLKQ9UBE8 527 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms