RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 ESRRBO95718 433 aa13.23□□□□□ -0.29
GTF3C3-206ENST00000448539 TBX6O95947 436 aaPredicted RBP13.23□□□□□ -0.29
GTF3C3-206ENST00000448539 ENO1P06733 434 aaKnown RBP13.23□□□□□ -0.29
GTF3C3-206ENST00000448539 FAM87AP0C7U9 286 aa13.23□□□□□ -0.29
GTF3C3-206ENST00000448539 ACPPP15309 386 aa13.23□□□□□ -0.29
GTF3C3-206ENST00000448539 CREB1P16220 341 aa13.23□□□□□ -0.29
GTF3C3-206ENST00000448539 CERS1P27544 350 aa13.23□□□□□ -0.29
GTF3C3-206ENST00000448539 CCL11P51671 97 aa13.23□□□□□ -0.29
GTF3C3-206ENST00000448539 CHAF1BQ13112 559 aa13.23□□□□□ -0.29
GTF3C3-206ENST00000448539 CUL3Q13618 768 aa13.23□□□□□ -0.29
GTF3C3-206ENST00000448539 PCLAFQ15004 111 aa13.23□□□□□ -0.29
GTF3C3-206ENST00000448539 TUBB8Q3ZCM7 444 aa13.23□□□□□ -0.29
GTF3C3-206ENST00000448539 PCSK4Q6UW60 755 aa13.23□□□□□ -0.29
GTF3C3-206ENST00000448539 FRMD7Q6ZUT3 714 aa13.23□□□□□ -0.29
GTF3C3-206ENST00000448539 EXOC3L1Q86VI1 746 aa13.23□□□□□ -0.29
GTF3C3-206ENST00000448539 APLFQ8IW19 511 aaPredicted RBP13.23□□□□□ -0.29
GTF3C3-206ENST00000448539 TMEM151BQ8IW70 566 aa13.23□□□□□ -0.29
GTF3C3-206ENST00000448539 CA13Q8N1Q1 262 aa13.23□□□□□ -0.29
GTF3C3-206ENST00000448539 METTL6Q8TCB7 284 aa13.23□□□□□ -0.29
GTF3C3-206ENST00000448539 QRFPRQ96P65 431 aa13.23□□□□□ -0.29
GTF3C3-206ENST00000448539 VN1R1Q9GZP7 353 aa13.23□□□□□ -0.29
GTF3C3-206ENST00000448539 ADNPQ9H2P0 1102 aa13.23□□□□□ -0.29
GTF3C3-206ENST00000448539 GSTO2Q9H4Y5 243 aa13.23□□□□□ -0.29
GTF3C3-206ENST00000448539 SSU72Q9NP77 194 aaKnown RBP13.23□□□□□ -0.29
GTF3C3-206ENST00000448539 MID1IP1Q9NPA3 183 aa13.23□□□□□ -0.29
GTF3C3-206ENST00000448539 KCNK9Q9NPC2 374 aa13.23□□□□□ -0.29
GTF3C3-206ENST00000448539 NMRK1Q9NWW6 199 aa13.23□□□□□ -0.29
GTF3C3-206ENST00000448539 AHSPQ9NZD4 102 aa13.23□□□□□ -0.29
GTF3C3-206ENST00000448539 FBXL4Q9UKA2 621 aa13.23□□□□□ -0.29
GTF3C3-206ENST00000448539 MRPS33Q9Y291 106 aaKnown RBP13.23□□□□□ -0.29
GTF3C3-206ENST00000448539 ACTL7BQ9Y614 415 aa13.23□□□□□ -0.29
GTF3C3-206ENST00000448539 GCN1Q92616 2671 aaKnown RBP13.22□□□□□ -0.29
GTF3C3-206ENST00000448539 A0A1B0GTL3 188 aa13.22□□□□□ -0.29
GTF3C3-206ENST00000448539 MKRN2OSH3BPM6 223 aa13.22□□□□□ -0.29
GTF3C3-206ENST00000448539 RTCAO00442 366 aaKnown RBP13.22□□□□□ -0.29
GTF3C3-206ENST00000448539 CLDN4O14493 209 aa13.22□□□□□ -0.29
GTF3C3-206ENST00000448539 SOCS6O14544 535 aa13.22□□□□□ -0.29
GTF3C3-206ENST00000448539 TYROBPO43914 113 aa13.22□□□□□ -0.29
GTF3C3-206ENST00000448539 B4GALT2O60909 372 aa13.22□□□□□ -0.29
GTF3C3-206ENST00000448539 DNAJB6O75190 326 aa13.22□□□□□ -0.29
GTF3C3-206ENST00000448539 C8orf89P0DMQ9 161 aa13.22□□□□□ -0.29
GTF3C3-206ENST00000448539 HIST1H1TP22492 207 aaPredicted RBP13.22□□□□□ -0.29
GTF3C3-206ENST00000448539 ATP5A1P25705 553 aaKnown RBP13.22□□□□□ -0.29
GTF3C3-206ENST00000448539 ALDH3A1P30838 453 aa13.22□□□□□ -0.29
GTF3C3-206ENST00000448539 TSFMP43897 325 aaKnown RBP13.22□□□□□ -0.29
GTF3C3-206ENST00000448539 ARFIP1P53367 373 aa13.22□□□□□ -0.29
GTF3C3-206ENST00000448539 RAB38P57729 211 aa13.22□□□□□ -0.29
GTF3C3-206ENST00000448539 KCNAB2Q13303 367 aa13.22□□□□□ -0.29
GTF3C3-206ENST00000448539 RUNX2Q13950 521 aa13.22□□□□□ -0.29
GTF3C3-206ENST00000448539 DCAF10Q5QP82 559 aa13.22□□□□□ -0.29
GTF3C3-206ENST00000448539 CPZQ66K79 652 aa13.22□□□□□ -0.29
GTF3C3-206ENST00000448539 OR4C11Q6IEV9 310 aa13.22□□□□□ -0.29
GTF3C3-206ENST00000448539 KIRREL2Q6UWL6 708 aa13.22□□□□□ -0.29
GTF3C3-206ENST00000448539 UBE3DQ7Z6J8 389 aa13.22□□□□□ -0.29
GTF3C3-206ENST00000448539 ACOT4Q8N9L9 421 aa13.22□□□□□ -0.29
GTF3C3-206ENST00000448539 LSM14AQ8ND56 463 aaKnown RBP13.22□□□□□ -0.29
GTF3C3-206ENST00000448539 C8orf44Q96CB5 159 aa13.22□□□□□ -0.29
GTF3C3-206ENST00000448539 LYRM4Q9HD34 91 aa13.22□□□□□ -0.29
GTF3C3-206ENST00000448539 ATP13A2Q9NQ11 1180 aa13.22□□□□□ -0.29
GTF3C3-206ENST00000448539 PRDM7Q9NQW5 492 aa13.22□□□□□ -0.29
GTF3C3-206ENST00000448539 PPT2Q9UMR5 302 aa13.22□□□□□ -0.29
GTF3C3-206ENST00000448539 SCN3AQ9NY46 2000 aa13.22□□□□□ -0.29
GTF3C3-206ENST00000448539 MANBAO00462 879 aa13.21□□□□□ -0.29
GTF3C3-206ENST00000448539 TM9SF1O15321 606 aa13.21□□□□□ -0.29
GTF3C3-206ENST00000448539 PRMT3O60678 531 aa13.21□□□□□ -0.29
GTF3C3-206ENST00000448539 ULK1O75385 1050 aa13.21□□□□□ -0.29
GTF3C3-206ENST00000448539 HPP00738 406 aa13.21□□□□□ -0.29
GTF3C3-206ENST00000448539 PDYNP01213 254 aa13.21□□□□□ -0.29
GTF3C3-206ENST00000448539 LIM2P55344 173 aa13.21□□□□□ -0.29
GTF3C3-206ENST00000448539 EEF1A2Q05639 463 aaKnown RBP13.21□□□□□ -0.29
GTF3C3-206ENST00000448539 ACTN3Q08043 901 aaPredicted RBP13.21□□□□□ -0.29
GTF3C3-206ENST00000448539 C19orf57Q0VDD7 668 aa13.21□□□□□ -0.29
GTF3C3-206ENST00000448539 AIMP2Q13155 320 aaKnown RBP13.21□□□□□ -0.29
GTF3C3-206ENST00000448539 ABRAXAS2Q15018 415 aa13.21□□□□□ -0.29
GTF3C3-206ENST00000448539 NSDHLQ15738 373 aa13.21□□□□□ -0.29
GTF3C3-206ENST00000448539 TNFAIP8L3Q5GJ75 292 aa13.21□□□□□ -0.29
GTF3C3-206ENST00000448539 IRAK1BP1Q5VVH5 260 aa13.21□□□□□ -0.29
GTF3C3-206ENST00000448539 CYP20A1Q6UW02 462 aa13.21□□□□□ -0.29
GTF3C3-206ENST00000448539 ZNF793Q6ZN11 406 aa13.21□□□□□ -0.29
GTF3C3-206ENST00000448539 NDUFAF7Q7L592 441 aa13.21□□□□□ -0.29
GTF3C3-206ENST00000448539 HDXQ7Z353 690 aa13.21□□□□□ -0.29
GTF3C3-206ENST00000448539 PLPP5Q8NEB5 264 aa13.21□□□□□ -0.29
GTF3C3-206ENST00000448539 OR11G2Q8NGC1 345 aa13.21□□□□□ -0.29
GTF3C3-206ENST00000448539 PPP1R14CQ8TAE6 165 aa13.21□□□□□ -0.29
GTF3C3-206ENST00000448539 AGAP11Q8TF27 550 aa13.21□□□□□ -0.29
GTF3C3-206ENST00000448539 CNDP1Q96KN2 507 aa13.21□□□□□ -0.29
GTF3C3-206ENST00000448539 PTCHD1Q96NR3 888 aa13.21□□□□□ -0.29
GTF3C3-206ENST00000448539 TRMOQ9BU70 441 aa13.21□□□□□ -0.29
GTF3C3-206ENST00000448539 GATA5Q9BWX5 397 aaPredicted RBP13.21□□□□□ -0.29
GTF3C3-206ENST00000448539 TRIM55Q9BYV6 548 aa13.21□□□□□ -0.29
GTF3C3-206ENST00000448539 BRF2Q9HAW0 419 aa13.21□□□□□ -0.29
GTF3C3-206ENST00000448539 TMBIM4Q9HC24 238 aa13.21□□□□□ -0.29
GTF3C3-206ENST00000448539 EML4Q9HC35 981 aaKnown RBP13.21□□□□□ -0.29
GTF3C3-206ENST00000448539 LANCL2Q9NS86 450 aa13.21□□□□□ -0.29
GTF3C3-206ENST00000448539 TUBD1Q9UJT1 453 aa13.21□□□□□ -0.29
GTF3C3-206ENST00000448539 ZNF225Q9UK10 706 aa13.21□□□□□ -0.29
GTF3C3-206ENST00000448539 DAPP1Q9UN19 280 aa13.21□□□□□ -0.29
GTF3C3-206ENST00000448539 SLC12A4Q9UP95 1085 aa13.21□□□□□ -0.29
GTF3C3-206ENST00000448539 FASNP49327 2511 aaKnown RBP13.2□□□□□ -0.3
GTF3C3-206ENST00000448539 NSG1A0A0A6YYJ2 146 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms