RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 GPRIN3Q6ZVF9 776 aa16.45■□□□□ 0.22
SMARCAL1-209ENST00000444508 RNF175Q8N4F7 328 aa16.45■□□□□ 0.22
SMARCAL1-209ENST00000444508 RGMAQ96B86 450 aa16.45■□□□□ 0.22
SMARCAL1-209ENST00000444508 MTFMTQ96DP5 389 aaKnown RBP16.45■□□□□ 0.22
SMARCAL1-209ENST00000444508 ZNF382Q96SR6 550 aa16.45■□□□□ 0.22
SMARCAL1-209ENST00000444508 MESP1Q9BRJ9 268 aa16.45■□□□□ 0.22
SMARCAL1-209ENST00000444508 PRDM7Q9NQW5 492 aa16.45■□□□□ 0.22
SMARCAL1-209ENST00000444508 ZNF71Q9NQZ8 489 aaPredicted RBP16.45■□□□□ 0.22
SMARCAL1-209ENST00000444508 GPR83Q9NYM4 423 aa16.45■□□□□ 0.22
SMARCAL1-209ENST00000444508 SENP1Q9P0U3 644 aa16.45■□□□□ 0.22
SMARCAL1-209ENST00000444508 TRPS1Q9UHF7 1281 aa16.45■□□□□ 0.22
SMARCAL1-209ENST00000444508 SNX6Q9UNH7 406 aa16.45■□□□□ 0.22
SMARCAL1-209ENST00000444508 MRPS33Q9Y291 106 aaKnown RBP16.45■□□□□ 0.22
SMARCAL1-209ENST00000444508 TP53TG5Q9Y2B4 290 aa16.45■□□□□ 0.22
SMARCAL1-209ENST00000444508 PLLPQ9Y342 182 aa16.45■□□□□ 0.22
SMARCAL1-209ENST00000444508 BOD1L1Q8NFC6 3051 aa16.44■□□□□ 0.22
SMARCAL1-209ENST00000444508 LOC102723996A0A087X1L8 192 aa16.44■□□□□ 0.22
SMARCAL1-209ENST00000444508 IGHV1-45A0A0A0MS14 117 aa16.44■□□□□ 0.22
SMARCAL1-209ENST00000444508 MAGEB17A8MXT2 336 aa16.44■□□□□ 0.22
SMARCAL1-209ENST00000444508 PPP6CO00743 305 aa16.44■□□□□ 0.22
SMARCAL1-209ENST00000444508 PRMT3O60678 531 aa16.44■□□□□ 0.22
SMARCAL1-209ENST00000444508 PRB1P04280 392 aa16.44■□□□□ 0.22
SMARCAL1-209ENST00000444508 COX6A1P12074 109 aa16.44■□□□□ 0.22
SMARCAL1-209ENST00000444508 TSFMP43897 325 aaKnown RBP16.44■□□□□ 0.22
SMARCAL1-209ENST00000444508 NEK2P51955 445 aa16.44■□□□□ 0.22
SMARCAL1-209ENST00000444508 PGDP52209 483 aa16.44■□□□□ 0.22
SMARCAL1-209ENST00000444508 RAB38P57729 211 aa16.44■□□□□ 0.22
SMARCAL1-209ENST00000444508 DNAJB13P59910 316 aa16.44■□□□□ 0.22
SMARCAL1-209ENST00000444508 RHAGQ02094 409 aa16.44■□□□□ 0.22
SMARCAL1-209ENST00000444508 CUL3Q13618 768 aa16.44■□□□□ 0.22
SMARCAL1-209ENST00000444508 RUNX2Q13950 521 aa16.44■□□□□ 0.22
SMARCAL1-209ENST00000444508 ABRAXAS2Q15018 415 aa16.44■□□□□ 0.22
SMARCAL1-209ENST00000444508 NSDHLQ15738 373 aa16.44■□□□□ 0.22
SMARCAL1-209ENST00000444508 CFAP157Q5JU67 520 aa16.44■□□□□ 0.22
SMARCAL1-209ENST00000444508 CEP85LQ5SZL2 805 aa16.44■□□□□ 0.22
SMARCAL1-209ENST00000444508 OR4C11Q6IEV9 310 aa16.44■□□□□ 0.22
SMARCAL1-209ENST00000444508 LETMD1Q6P1Q0 360 aa16.44■□□□□ 0.22
SMARCAL1-209ENST00000444508 UBE3DQ7Z6J8 389 aa16.44■□□□□ 0.22
SMARCAL1-209ENST00000444508 IQCKQ8N0W5 287 aa16.44■□□□□ 0.22
SMARCAL1-209ENST00000444508 ACOT4Q8N9L9 421 aa16.44■□□□□ 0.22
SMARCAL1-209ENST00000444508 PLPP5Q8NEB5 264 aa16.44■□□□□ 0.22
SMARCAL1-209ENST00000444508 ARMC2Q8NEN0 867 aa16.44■□□□□ 0.22
SMARCAL1-209ENST00000444508 FDCSPQ8NFU4 85 aa16.44■□□□□ 0.22
SMARCAL1-209ENST00000444508 MYRIPQ8NFW9 859 aa16.44■□□□□ 0.22
SMARCAL1-209ENST00000444508 ZIM3Q96PE6 472 aa16.44■□□□□ 0.22
SMARCAL1-209ENST00000444508 SERPINI1Q99574 410 aa16.44■□□□□ 0.22
SMARCAL1-209ENST00000444508 C12orf65Q9H3J6 166 aaKnown RBP16.44■□□□□ 0.22
SMARCAL1-209ENST00000444508 CENPHQ9H3R5 247 aa16.44■□□□□ 0.22
SMARCAL1-209ENST00000444508 ZNF160Q9HCG1 818 aa16.44■□□□□ 0.22
SMARCAL1-209ENST00000444508 RIC8BQ9NVN3 520 aa16.44■□□□□ 0.22
SMARCAL1-209ENST00000444508 OXSMQ9NWU1 459 aa16.44■□□□□ 0.22
SMARCAL1-209ENST00000444508 PSD3Q9NYI0 1048 aa16.44■□□□□ 0.22
SMARCAL1-209ENST00000444508 PPT2Q9UMR5 302 aa16.44■□□□□ 0.22
SMARCAL1-209ENST00000444508 SPACA6W5XKT8 324 aa16.44■□□□□ 0.22
SMARCAL1-209ENST00000444508 A0A1B0GTL3 188 aa16.43■□□□□ 0.22
SMARCAL1-209ENST00000444508 A0A1W2PQ72 361 aa16.43■□□□□ 0.22
SMARCAL1-209ENST00000444508 OR2W5A6NFC9 320 aa16.43■□□□□ 0.22
SMARCAL1-209ENST00000444508 MASP2O00187 686 aa16.43■□□□□ 0.22
SMARCAL1-209ENST00000444508 RTCAO00442 366 aaKnown RBP16.43■□□□□ 0.22
SMARCAL1-209ENST00000444508 SPAG7O75391 227 aa16.43■□□□□ 0.22
SMARCAL1-209ENST00000444508 OR4F21O95013 312 aa16.43■□□□□ 0.22
SMARCAL1-209ENST00000444508 ALPPP05187 535 aa16.43■□□□□ 0.22
SMARCAL1-209ENST00000444508 HIST1H1TP22492 207 aaPredicted RBP16.43■□□□□ 0.22
SMARCAL1-209ENST00000444508 ATP5A1P25705 553 aaKnown RBP16.43■□□□□ 0.22
SMARCAL1-209ENST00000444508 EFNA3P52797 238 aa16.43■□□□□ 0.22
SMARCAL1-209ENST00000444508 ARFIP1P53367 373 aa16.43■□□□□ 0.22
SMARCAL1-209ENST00000444508 LIM2P55344 173 aa16.43■□□□□ 0.22
SMARCAL1-209ENST00000444508 PKNOX1P55347 436 aa16.43■□□□□ 0.22
SMARCAL1-209ENST00000444508 SOX8P57073 446 aa16.43■□□□□ 0.22
SMARCAL1-209ENST00000444508 NFATC3Q12968 1075 aa16.43■□□□□ 0.22
SMARCAL1-209ENST00000444508 RAPSNQ13702 412 aa16.43■□□□□ 0.22
SMARCAL1-209ENST00000444508 SGO1Q5FBB7 561 aa16.43■□□□□ 0.22
SMARCAL1-209ENST00000444508 LRIG3Q6UXM1 1119 aa16.43■□□□□ 0.22
SMARCAL1-209ENST00000444508 QSOX2Q6ZRP7 698 aa16.43■□□□□ 0.22
SMARCAL1-209ENST00000444508 LANCL3Q6ZV70 420 aa16.43■□□□□ 0.22
SMARCAL1-209ENST00000444508 ASB18Q6ZVZ8 466 aa16.43■□□□□ 0.22
SMARCAL1-209ENST00000444508 CPEB2Q7Z5Q1 589 aaKnown RBP16.43■□□□□ 0.22
SMARCAL1-209ENST00000444508 ANKRD37Q7Z713 158 aa16.43■□□□□ 0.22
SMARCAL1-209ENST00000444508 PARP9Q8IXQ6 854 aa16.43■□□□□ 0.22
SMARCAL1-209ENST00000444508 CDYL2Q8N8U2 506 aa16.43■□□□□ 0.22
SMARCAL1-209ENST00000444508 PTCHD1Q96NR3 888 aa16.43■□□□□ 0.22
SMARCAL1-209ENST00000444508 TUBB6Q9BUF5 446 aa16.43■□□□□ 0.22
SMARCAL1-209ENST00000444508 SLC29A3Q9BZD2 475 aa16.43■□□□□ 0.22
SMARCAL1-209ENST00000444508 ZNF700Q9H0M5 742 aa16.43■□□□□ 0.22
SMARCAL1-209ENST00000444508 LYRM4Q9HD34 91 aa16.43■□□□□ 0.22
SMARCAL1-209ENST00000444508 PRDM9Q9NQV7 894 aa16.43■□□□□ 0.22
SMARCAL1-209ENST00000444508 DAPP1Q9UN19 280 aa16.43■□□□□ 0.22
SMARCAL1-209ENST00000444508 COL6A6A6NMZ7 2263 aa16.42■□□□□ 0.22
SMARCAL1-209ENST00000444508 SCN2AQ99250 2005 aa16.42■□□□□ 0.22
SMARCAL1-209ENST00000444508 FAM227AF5H4B4 570 aa16.42■□□□□ 0.22
SMARCAL1-209ENST00000444508 CLDN4O14493 209 aa16.42■□□□□ 0.22
SMARCAL1-209ENST00000444508 PLPP1O14494 284 aa16.42■□□□□ 0.22
SMARCAL1-209ENST00000444508 KRT6AP02538 564 aa16.42■□□□□ 0.22
SMARCAL1-209ENST00000444508 KRT6BP04259 564 aa16.42■□□□□ 0.22
SMARCAL1-209ENST00000444508 ENO1P06733 434 aaKnown RBP16.42■□□□□ 0.22
SMARCAL1-209ENST00000444508 HMOX2P30519 316 aa16.42■□□□□ 0.22
SMARCAL1-209ENST00000444508 KRT6CP48668 564 aa16.42■□□□□ 0.22
SMARCAL1-209ENST00000444508 NAGLUP54802 743 aa16.42■□□□□ 0.22
SMARCAL1-209ENST00000444508 AP2B1P63010 937 aa16.42■□□□□ 0.22
SMARCAL1-209ENST00000444508 ACTN3Q08043 901 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms