RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 FAM47BQ8NA70 645 aa10.18□□□□□ -0.78
SF3A1-203ENST00000444440 NR4A3Q92570 626 aa10.18□□□□□ -0.78
SF3A1-203ENST00000444440 PTCD3Q96EY7 689 aaKnown RBP10.18□□□□□ -0.78
SF3A1-203ENST00000444440 GPR78Q96P69 363 aa10.18□□□□□ -0.78
SF3A1-203ENST00000444440 F2RL3Q96RI0 385 aa10.18□□□□□ -0.78
SF3A1-203ENST00000444440 FMO2Q99518 471 aa10.18□□□□□ -0.78
SF3A1-203ENST00000444440 SORBS1Q9BX66 1292 aaKnown RBP10.18□□□□□ -0.78
SF3A1-203ENST00000444440 CDC42EP4Q9H3Q1 356 aaKnown RBP10.18□□□□□ -0.78
SF3A1-203ENST00000444440 CDCP1Q9H5V8 836 aa10.18□□□□□ -0.78
SF3A1-203ENST00000444440 PRDM9Q9NQV7 894 aa10.18□□□□□ -0.78
SF3A1-203ENST00000444440 PRDM7Q9NQW5 492 aa10.18□□□□□ -0.78
SF3A1-203ENST00000444440 OLAHQ9NV23 265 aa10.18□□□□□ -0.78
SF3A1-203ENST00000444440 OSGIN2Q9Y236 505 aa10.18□□□□□ -0.78
SF3A1-203ENST00000444440 DNAJC13O75165 2243 aa10.18□□□□□ -0.78
SF3A1-203ENST00000444440 NINQ8N4C6 2090 aa10.18□□□□□ -0.78
SF3A1-203ENST00000444440 URADA6NGE7 173 aa10.17□□□□□ -0.78
SF3A1-203ENST00000444440 ANKDD1BA6NHY2 528 aa10.17□□□□□ -0.78
SF3A1-203ENST00000444440 GABRR3A8MPY1 467 aa10.17□□□□□ -0.78
SF3A1-203ENST00000444440 CYR61O00622 381 aa10.17□□□□□ -0.78
SF3A1-203ENST00000444440 CLGNO14967 610 aa10.17□□□□□ -0.78
SF3A1-203ENST00000444440 PRKNO60260 465 aaPredicted RBP10.17□□□□□ -0.78
SF3A1-203ENST00000444440 PRAMEF2O60811 474 aa10.17□□□□□ -0.78
SF3A1-203ENST00000444440 H2AFYO75367 372 aaKnown RBP10.17□□□□□ -0.78
SF3A1-203ENST00000444440 JAK1P23458 1154 aa10.17□□□□□ -0.78
SF3A1-203ENST00000444440 TPP2P29144 1249 aaPredicted RBP10.17□□□□□ -0.78
SF3A1-203ENST00000444440 CRABP2P29373 138 aa10.17□□□□□ -0.78
SF3A1-203ENST00000444440 LIM2P55344 173 aa10.17□□□□□ -0.78
SF3A1-203ENST00000444440 RAB38P57729 211 aa10.17□□□□□ -0.78
SF3A1-203ENST00000444440 STXBP1P61764 594 aaKnown RBP10.17□□□□□ -0.78
SF3A1-203ENST00000444440 UAP1Q16222 522 aaPredicted RBP10.17□□□□□ -0.78
SF3A1-203ENST00000444440 ZNF766Q5HY98 468 aa10.17□□□□□ -0.78
SF3A1-203ENST00000444440 SPINK14Q6IE38 97 aa10.17□□□□□ -0.78
SF3A1-203ENST00000444440 ABHD17CQ6PCB6 329 aa10.17□□□□□ -0.78
SF3A1-203ENST00000444440 LRRC70Q7Z2Q7 622 aa10.17□□□□□ -0.78
SF3A1-203ENST00000444440 CCDC91Q7Z6B0 441 aa10.17□□□□□ -0.78
SF3A1-203ENST00000444440 CLNKQ7Z7G1 428 aa10.17□□□□□ -0.78
SF3A1-203ENST00000444440 KRT78Q8N1N4 520 aa10.17□□□□□ -0.78
SF3A1-203ENST00000444440 BCORP1Q8N888 145 aa10.17□□□□□ -0.78
SF3A1-203ENST00000444440 APCDD1LQ8NCL9 501 aa10.17□□□□□ -0.78
SF3A1-203ENST00000444440 TTLQ8NG68 377 aa10.17□□□□□ -0.78
SF3A1-203ENST00000444440 OR2L5Q8NG80 312 aa10.17□□□□□ -0.78
SF3A1-203ENST00000444440 STAG3L4Q8TBR4 150 aa10.17□□□□□ -0.78
SF3A1-203ENST00000444440 ZNF473Q8WTR7 871 aaKnown RBP10.17□□□□□ -0.78
SF3A1-203ENST00000444440 SCMH1Q96GD3 660 aa10.17□□□□□ -0.78
SF3A1-203ENST00000444440 ZNF354BQ96LW1 612 aa10.17□□□□□ -0.78
SF3A1-203ENST00000444440 MS4A8Q9BY19 250 aa10.17□□□□□ -0.78
SF3A1-203ENST00000444440 REXO4Q9GZR2 422 aaKnown RBP10.17□□□□□ -0.78
SF3A1-203ENST00000444440 ACSS3Q9H6R3 686 aa10.17□□□□□ -0.78
SF3A1-203ENST00000444440 CNOT10Q9H9A5 744 aaKnown RBP10.17□□□□□ -0.78
SF3A1-203ENST00000444440 NMRAL1Q9HBL8 299 aa10.17□□□□□ -0.78
SF3A1-203ENST00000444440 KLHL1Q9NR64 748 aa10.17□□□□□ -0.78
SF3A1-203ENST00000444440 KCMF1Q9P0J7 381 aa10.17□□□□□ -0.78
SF3A1-203ENST00000444440 SLC5A6Q9Y289 635 aa10.17□□□□□ -0.78
SF3A1-203ENST00000444440 IKBKGQ9Y6K9 419 aa10.17□□□□□ -0.78
SF3A1-203ENST00000444440 PHF3Q92576 2039 aaKnown RBP10.17□□□□□ -0.78
SF3A1-203ENST00000444440 CSMD2Q7Z408 3487 aa10.17□□□□□ -0.78
SF3A1-203ENST00000444440 ARHGAP21Q5T5U3 1957 aa10.16□□□□□ -0.78
SF3A1-203ENST00000444440 A0A096LPK6 155 aa10.16□□□□□ -0.78
SF3A1-203ENST00000444440 K7EPI3 171 aa10.16□□□□□ -0.78
SF3A1-203ENST00000444440 SAP18O00422 153 aaKnown RBP10.16□□□□□ -0.78
SF3A1-203ENST00000444440 ZNHIT1O43257 154 aa10.16□□□□□ -0.78
SF3A1-203ENST00000444440 LRRTM2O43300 516 aa10.16□□□□□ -0.78
SF3A1-203ENST00000444440 NEURL1O76050 574 aa10.16□□□□□ -0.78
SF3A1-203ENST00000444440 MYO1DO94832 1006 aa10.16□□□□□ -0.78
SF3A1-203ENST00000444440 SIX3O95343 332 aaPredicted RBP10.16□□□□□ -0.78
SF3A1-203ENST00000444440 ACSL3O95573 720 aa10.16□□□□□ -0.78
SF3A1-203ENST00000444440 CASP2P42575 452 aa10.16□□□□□ -0.78
SF3A1-203ENST00000444440 MSH2P43246 934 aa10.16□□□□□ -0.78
SF3A1-203ENST00000444440 MAGEA12P43365 314 aa10.16□□□□□ -0.78
SF3A1-203ENST00000444440 GPR143P51810 404 aa10.16□□□□□ -0.78
SF3A1-203ENST00000444440 AP2B1P63010 937 aa10.16□□□□□ -0.78
SF3A1-203ENST00000444440 SKP1P63208 163 aa10.16□□□□□ -0.78
SF3A1-203ENST00000444440 IRF8Q02556 426 aa10.16□□□□□ -0.78
SF3A1-203ENST00000444440 ELOAQ14241 798 aaKnown RBP10.16□□□□□ -0.78
SF3A1-203ENST00000444440 OR1C1Q15619 314 aa10.16□□□□□ -0.78
SF3A1-203ENST00000444440 TBCCQ15814 346 aa10.16□□□□□ -0.78
SF3A1-203ENST00000444440 MEP1AQ16819 746 aa10.16□□□□□ -0.78
SF3A1-203ENST00000444440 TECRLQ5HYJ1 363 aa10.16□□□□□ -0.78
SF3A1-203ENST00000444440 C1QL3Q5VWW1 255 aa10.16□□□□□ -0.78
SF3A1-203ENST00000444440 NIPAL1Q6NVV3 410 aa10.16□□□□□ -0.78
SF3A1-203ENST00000444440 C16orf47Q6ZP98 133 aaPredicted RBP10.16□□□□□ -0.78
SF3A1-203ENST00000444440 TBC1D1Q86TI0 1168 aaPredicted RBP10.16□□□□□ -0.78
SF3A1-203ENST00000444440 LAS2Q8IYD9 372 aa10.16□□□□□ -0.78
SF3A1-203ENST00000444440 ZNF321PQ8N8H1 164 aa10.16□□□□□ -0.78
SF3A1-203ENST00000444440 UHMK1Q8TAS1 419 aaKnown RBP10.16□□□□□ -0.78
SF3A1-203ENST00000444440 THAP3Q8WTV1 239 aaPredicted RBP10.16□□□□□ -0.78
SF3A1-203ENST00000444440 SREK1Q8WXA9 508 aaKnown RBP10.16□□□□□ -0.78
SF3A1-203ENST00000444440 MAPKAP1Q9BPZ7 522 aa10.16□□□□□ -0.78
SF3A1-203ENST00000444440 EFCAB11Q9BUY7 163 aa10.16□□□□□ -0.78
SF3A1-203ENST00000444440 NPLQ9BXD5 320 aaPredicted RBP10.16□□□□□ -0.78
SF3A1-203ENST00000444440 CAPS2Q9BXY5 557 aa10.16□□□□□ -0.78
SF3A1-203ENST00000444440 FUT8Q9BYC5 575 aa10.16□□□□□ -0.78
SF3A1-203ENST00000444440 PITHD1Q9GZP4 211 aaPredicted RBP10.16□□□□□ -0.78
SF3A1-203ENST00000444440 TSPAN10Q9H1Z9 355 aaPredicted RBP10.16□□□□□ -0.78
SF3A1-203ENST00000444440 CLK4Q9HAZ1 481 aaKnown RBP10.16□□□□□ -0.78
SF3A1-203ENST00000444440 PRTFDC1Q9NRG1 225 aa10.16□□□□□ -0.78
SF3A1-203ENST00000444440 DAPP1Q9UN19 280 aa10.16□□□□□ -0.78
SF3A1-203ENST00000444440 ACOT9Q9Y305 439 aa10.16□□□□□ -0.78
SF3A1-203ENST00000444440 CSMD1Q96PZ7 3565 aa10.15□□□□□ -0.78
SF3A1-203ENST00000444440 A0A087X1B8 175 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms