RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 CGREF1Q99674 301 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 NLNQ9BYT8 704 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 KCNH6Q9H252 994 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 NANOGQ9H9S0 305 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 RNPEPL1Q9HAU8 725 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 FAM60AQ9NP50 221 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 SERHLQ9NQF3 203 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 ATP6V1HQ9UI12 483 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 RAB23Q9ULC3 237 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 EXO1Q9UQ84 846 aaKnown RBP9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 BTBD3Q9Y2F9 522 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 PCDH15Q96QU1 1955 aa9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 SCN3AQ9NY46 2000 aa9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 A0A096LPI6 279 aa9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 PRSS51A0A1B0GVH4 220 aa9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 CPED1A4D0V7 1026 aa9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 PRORSD1PA6NEY8 169 aa9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 NME4O00746 187 aa9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 NVLO15381 856 aaKnown RBP9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 ZSCAN9O15535 394 aaPredicted RBP9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 MAP3K7O43318 606 aa9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 SIGLEC6O43699 453 aa9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 SH3BP5O60239 455 aa9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 ERN1O75460 977 aaKnown RBP9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 FAM58BPP0C7Q3 252 aa9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 DDX5P17844 614 aaKnown RBP9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 EFNA1P20827 205 aaPredicted RBP9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 ATP5A1P25705 553 aaKnown RBP9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 CERS1P27544 350 aa9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 ERFP50548 548 aa9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 BTN3A2P78410 334 aa9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 SUZ12Q15022 739 aaKnown RBP9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 ANXA8L1Q5VT79 327 aa9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 USP53Q70EK8 1073 aa9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 ABHD13Q7L211 337 aa9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 DGLUCYQ7Z3D6 616 aa9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 TICAM1Q8IUC6 712 aa9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 PLXDC1Q8IUK5 500 aa9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 SLC15A3Q8IY34 581 aa9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 MMP21Q8N119 569 aa9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 AMER3Q8N944 861 aa9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 CCDC74AQ96AQ1 378 aa9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 TM4SF18Q96CE8 201 aa9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 COQ8BQ96D53 544 aa9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 ANKRD27Q96NW4 1050 aa9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 GBP5Q96PP8 586 aa9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 CD180Q99467 661 aa9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 INPP5KQ9BT40 448 aa9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 BHLHE41Q9C0J9 482 aaPredicted RBP9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 RAB33BQ9H082 229 aa9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 SMOC1Q9H4F8 434 aa9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 PRDM7Q9NQW5 492 aa9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 VAPAQ9P0L0 249 aa9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 ABCD2Q9UBJ2 740 aa9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 EPHA6Q9UF33 1036 aa9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 MAN2B2Q9Y2E5 1009 aa9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 SPTBP11277 2137 aa9.03□□□□□ -0.96
SMPD4P1-203ENST00000443839 GUCY1B2O75343 617 aa9.02□□□□□ -0.96
SMPD4P1-203ENST00000443839 CPSF4O95639 269 aaKnown RBP9.02□□□□□ -0.96
SMPD4P1-203ENST00000443839 GSNP06396 782 aa9.02□□□□□ -0.96
SMPD4P1-203ENST00000443839 DDCP20711 480 aa9.02□□□□□ -0.96
SMPD4P1-203ENST00000443839 ZNF10P21506 573 aaPredicted RBP9.02□□□□□ -0.96
SMPD4P1-203ENST00000443839 ATXN3P54252 364 aaPredicted RBP9.02□□□□□ -0.96
SMPD4P1-203ENST00000443839 WNT3P56703 355 aa9.02□□□□□ -0.96
SMPD4P1-203ENST00000443839 MTPNP58546 118 aa9.02□□□□□ -0.96
SMPD4P1-203ENST00000443839 ACTR3P61158 418 aa9.02□□□□□ -0.96
SMPD4P1-203ENST00000443839 TRA2BP62995 288 aaKnown RBP9.02□□□□□ -0.96
SMPD4P1-203ENST00000443839 PDE7AQ13946 482 aa9.02□□□□□ -0.96
SMPD4P1-203ENST00000443839 FLOT2Q14254 428 aa9.02□□□□□ -0.96
SMPD4P1-203ENST00000443839 DEFB134Q4QY38 66 aa9.02□□□□□ -0.96
SMPD4P1-203ENST00000443839 NDUFAF5Q5TEU4 345 aa9.02□□□□□ -0.96
SMPD4P1-203ENST00000443839 SPRED1Q7Z699 444 aa9.02□□□□□ -0.96
SMPD4P1-203ENST00000443839 MCATQ8IVS2 390 aaKnown RBP9.02□□□□□ -0.96
SMPD4P1-203ENST00000443839 CLECL1Q8IZS7 167 aa9.02□□□□□ -0.96
SMPD4P1-203ENST00000443839 ZCCHC7Q8N3Z6 543 aaKnown RBP9.02□□□□□ -0.96
SMPD4P1-203ENST00000443839 EID2Q8N6I1 236 aa9.02□□□□□ -0.96
SMPD4P1-203ENST00000443839 ENDOVQ8N8Q3 282 aaKnown RBP9.02□□□□□ -0.96
SMPD4P1-203ENST00000443839 HIPK4Q8NE63 616 aa9.02□□□□□ -0.96
SMPD4P1-203ENST00000443839 OR6C4Q8NGE1 309 aa9.02□□□□□ -0.96
SMPD4P1-203ENST00000443839 OR8J3Q8NGG0 315 aa9.02□□□□□ -0.96
SMPD4P1-203ENST00000443839 UTP15Q8TED0 518 aaKnown RBP9.02□□□□□ -0.96
SMPD4P1-203ENST00000443839 TMEM125Q96AQ2 219 aa9.02□□□□□ -0.96
SMPD4P1-203ENST00000443839 MIEF2Q96C03 454 aa9.02□□□□□ -0.96
SMPD4P1-203ENST00000443839 SH3GL1Q99961 368 aa9.02□□□□□ -0.96
SMPD4P1-203ENST00000443839 THUMPD3Q9BV44 507 aaKnown RBP9.02□□□□□ -0.96
SMPD4P1-203ENST00000443839 FAIM2Q9BWQ8 316 aa9.02□□□□□ -0.96
SMPD4P1-203ENST00000443839 ROGDIQ9GZN7 287 aa9.02□□□□□ -0.96
SMPD4P1-203ENST00000443839 ARRDC1-AS1Q9H2J1 176 aa9.02□□□□□ -0.96
SMPD4P1-203ENST00000443839 IRAK4Q9NWZ3 460 aa9.02□□□□□ -0.96
SMPD4P1-203ENST00000443839 CMTM6Q9NX76 183 aa9.02□□□□□ -0.96
SMPD4P1-203ENST00000443839 TEX10Q9NXF1 929 aaPredicted RBP9.02□□□□□ -0.96
SMPD4P1-203ENST00000443839 SUCOQ9UBS9 1254 aaKnown RBP9.02□□□□□ -0.96
SMPD4P1-203ENST00000443839 NKX1-2Q9UD57 310 aaPredicted RBP9.02□□□□□ -0.96
SMPD4P1-203ENST00000443839 PCDHGB4Q9UN71 923 aa9.02□□□□□ -0.96
SMPD4P1-203ENST00000443839 PCDHB14Q9Y5E9 798 aa9.02□□□□□ -0.96
SMPD4P1-203ENST00000443839 PCDHA9Q9Y5H5 950 aa9.02□□□□□ -0.96
SMPD4P1-203ENST00000443839 R4GN57 208 aa9.02□□□□□ -0.96
SMPD4P1-203ENST00000443839 ZNF318Q5VUA4 2279 aa9.02□□□□□ -0.97
SMPD4P1-203ENST00000443839 IGHV5-51A0A0C4DH38 117 aa9.02□□□□□ -0.97
SMPD4P1-203ENST00000443839 RNASET2O00584 256 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms