RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 AP2B1P63010 937 aa8.27□□□□□ -1.09
USP6NL-203ENST00000443016 PPP2R2AP63151 447 aa8.27□□□□□ -1.09
USP6NL-203ENST00000443016 SKP1P63208 163 aa8.27□□□□□ -1.09
USP6NL-203ENST00000443016 ZNF460Q14592 562 aa8.27□□□□□ -1.09
USP6NL-203ENST00000443016 ZNF169Q14929 603 aaPredicted RBP8.27□□□□□ -1.09
USP6NL-203ENST00000443016 CRB2Q5IJ48 1285 aa8.27□□□□□ -1.09
USP6NL-203ENST00000443016 TMEM214Q6NUQ4 689 aaKnown RBP8.27□□□□□ -1.09
USP6NL-203ENST00000443016 CEP97Q8IW35 865 aa8.27□□□□□ -1.09
USP6NL-203ENST00000443016 FAM76AQ8TAV0 307 aa8.27□□□□□ -1.09
USP6NL-203ENST00000443016 BRIX1Q8TDN6 353 aaKnown RBP8.27□□□□□ -1.09
USP6NL-203ENST00000443016 NMRAL1Q9HBL8 299 aa8.27□□□□□ -1.09
USP6NL-203ENST00000443016 C19orf25Q9UFG5 118 aaPredicted RBP8.27□□□□□ -1.09
USP6NL-203ENST00000443016 GRID1Q9ULK0 1009 aa8.27□□□□□ -1.09
USP6NL-203ENST00000443016 DYRK1BQ9Y463 629 aa8.27□□□□□ -1.09
USP6NL-203ENST00000443016 ANKUB1A6NFN9 424 aa8.27□□□□□ -1.09
USP6NL-203ENST00000443016 CDC123O75794 336 aaPredicted RBP8.27□□□□□ -1.09
USP6NL-203ENST00000443016 KLHL18O94889 574 aa8.27□□□□□ -1.09
USP6NL-203ENST00000443016 KLHL2O95198 593 aa8.27□□□□□ -1.09
USP6NL-203ENST00000443016 CCDC166P0CW27 439 aa8.27□□□□□ -1.09
USP6NL-203ENST00000443016 CRHR1P34998 444 aa8.27□□□□□ -1.09
USP6NL-203ENST00000443016 MFAP5Q13361 173 aa8.27□□□□□ -1.09
USP6NL-203ENST00000443016 HERC3Q15034 1050 aa8.27□□□□□ -1.09
USP6NL-203ENST00000443016 CATSPEREQ5SY80 951 aa8.27□□□□□ -1.09
USP6NL-203ENST00000443016 RIPOR1Q6ZS17 1223 aa8.27□□□□□ -1.09
USP6NL-203ENST00000443016 ZC3H7AQ8IWR0 971 aaKnown RBP8.27□□□□□ -1.09
USP6NL-203ENST00000443016 ARHGEF39Q8N4T4 335 aa8.27□□□□□ -1.09
USP6NL-203ENST00000443016 ABHD11Q8NFV4 315 aa8.27□□□□□ -1.09
USP6NL-203ENST00000443016 OR56A3Q8NH54 315 aa8.27□□□□□ -1.09
USP6NL-203ENST00000443016 SLC5A11Q8WWX8 675 aa8.27□□□□□ -1.09
USP6NL-203ENST00000443016 NEIL2Q969S2 332 aa8.27□□□□□ -1.09
USP6NL-203ENST00000443016 FBXL8Q96CD0 374 aa8.27□□□□□ -1.09
USP6NL-203ENST00000443016 PDLIM5Q96HC4 596 aaKnown RBP8.27□□□□□ -1.09
USP6NL-203ENST00000443016 MAGEB10Q96LZ2 347 aaPredicted RBP8.27□□□□□ -1.09
USP6NL-203ENST00000443016 LMF1Q96S06 567 aa8.27□□□□□ -1.09
USP6NL-203ENST00000443016 VN1R1Q9GZP7 353 aa8.27□□□□□ -1.09
USP6NL-203ENST00000443016 TEKT2Q9UIF3 430 aa8.27□□□□□ -1.09
USP6NL-203ENST00000443016 TMCC3Q9ULS5 477 aa8.27□□□□□ -1.09
USP6NL-203ENST00000443016 NAALAD2Q9Y3Q0 740 aa8.27□□□□□ -1.09
USP6NL-203ENST00000443016 KCNE2Q9Y6J6 123 aa8.27□□□□□ -1.09
USP6NL-203ENST00000443016 TEX15Q9BXT5 2789 aa8.27□□□□□ -1.09
USP6NL-203ENST00000443016 TMEM120BA0PK00 339 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 CLEC18AA5D8T8 446 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 NPEPPSL1A6NEC2 478 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 ZNF860A6NHJ4 632 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 A8MUI8 341 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 H3BQF6 201 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 CDC7O00311 574 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 SEMA7AO75326 666 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 SPAG7O75391 227 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 RDH16O75452 317 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 SEC24DO94855 1032 aaPredicted RBP8.26□□□□□ -1.09
USP6NL-203ENST00000443016 F10P00742 488 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 HNF4AP41235 474 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 SLC18A1P54219 525 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 RGS1Q08116 209 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 CCDC153Q494R4 210 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 DEFB134Q4QY38 66 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 SBSNQ6UWP8 590 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 IGFL2Q6UWQ7 119 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 CLEC18BQ6UXF7 455 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 TMPRSS11BQ86T26 416 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 BANPQ8N9N5 519 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 CCDC63Q8NA47 563 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 MFSD9Q8NBP5 474 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 CLEC18CQ8NCF0 446 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 OR1N1Q8NGS0 311 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 SSC4DQ8WTU2 575 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 OR4K3Q96R72 315 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 ELAC2Q9BQ52 826 aaKnown RBP8.26□□□□□ -1.09
USP6NL-203ENST00000443016 TUBB6Q9BUF5 446 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 DERL2Q9GZP9 239 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.26□□□□□ -1.09
USP6NL-203ENST00000443016 ACAD8Q9UKU7 415 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 SLC22A14Q9Y267 594 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 SLC22A7Q9Y694 548 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 SCN3AQ9NY46 2000 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 IGHV3-20A0A0C4DH32 117 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 OR2W5A6NFC9 320 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 NCF1BA6NI72 391 aaPredicted RBP8.26□□□□□ -1.09
USP6NL-203ENST00000443016 NCF1CA8MVU1 366 aaPredicted RBP8.26□□□□□ -1.09
USP6NL-203ENST00000443016 RBP1P09455 135 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 GP1BBP13224 206 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 NCF1P14598 390 aaPredicted RBP8.26□□□□□ -1.09
USP6NL-203ENST00000443016 SNRPNP63162 240 aaKnown RBP8.26□□□□□ -1.09
USP6NL-203ENST00000443016 PWP1Q13610 501 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 RBBP5Q15291 538 aaKnown RBP8.26□□□□□ -1.09
USP6NL-203ENST00000443016 NSDHLQ15738 373 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 ZXDCQ2QGD7 858 aaPredicted RBP8.26□□□□□ -1.09
USP6NL-203ENST00000443016 BTBD16Q32M84 506 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 ABHD17BQ5VST6 288 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 FAM180AQ6UWF9 173 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 TMEM207Q6UWW9 146 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 ABHD13Q7L211 337 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 ADAMTSL2Q86TH1 951 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 THOC6Q86W42 341 aaKnown RBP8.26□□□□□ -1.09
USP6NL-203ENST00000443016 ZNF740Q8NDX6 193 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 CATSPER1Q8NEC5 780 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 SUN3Q8TAQ9 357 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 KCTD4Q8WVF5 259 aa8.26□□□□□ -1.09
USP6NL-203ENST00000443016 TM4SF19Q96DZ7 209 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms