RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 EFCAB11Q9BUY7 163 aa11.01□□□□□ -0.65
TTC28-203ENST00000442232 ROGDIQ9GZN7 287 aa11.01□□□□□ -0.65
TTC28-203ENST00000442232 REXO4Q9GZR2 422 aaKnown RBP11.01□□□□□ -0.65
TTC28-203ENST00000442232 NT5DC2Q9H857 520 aa11.01□□□□□ -0.65
TTC28-203ENST00000442232 SAYSD1Q9NPB0 183 aa11.01□□□□□ -0.65
TTC28-203ENST00000442232 MOCS1Q9NZB8 636 aa11.01□□□□□ -0.65
TTC28-203ENST00000442232 CD274Q9NZQ7 290 aa11.01□□□□□ -0.65
TTC28-203ENST00000442232 RNF112Q9ULX5 631 aa11.01□□□□□ -0.65
TTC28-203ENST00000442232 SPACA6W5XKT8 324 aa11.01□□□□□ -0.65
TTC28-203ENST00000442232 NCOA6Q14686 2063 aaPredicted RBP11□□□□□ -0.65
TTC28-203ENST00000442232 CACNA1CQ13936 2221 aa11□□□□□ -0.65
TTC28-203ENST00000442232 FAM187AA6NFU0 413 aa11□□□□□ -0.65
TTC28-203ENST00000442232 USP27XA6NNY8 438 aa11□□□□□ -0.65
TTC28-203ENST00000442232 C4orf51C9J302 202 aa11□□□□□ -0.65
TTC28-203ENST00000442232 EIF3HO15372 352 aaKnown RBP eCLIP11□□□□□ -0.65
TTC28-203ENST00000442232 STK16O75716 305 aa11□□□□□ -0.65
TTC28-203ENST00000442232 CLDN14O95500 239 aa11□□□□□ -0.65
TTC28-203ENST00000442232 IFNA16P05015 189 aa11□□□□□ -0.65
TTC28-203ENST00000442232 HSPA7P48741 367 aa11□□□□□ -0.65
TTC28-203ENST00000442232 MEOX1P50221 254 aa11□□□□□ -0.65
TTC28-203ENST00000442232 SSR4P51571 173 aa11□□□□□ -0.65
TTC28-203ENST00000442232 PLA2G16P53816 162 aa11□□□□□ -0.65
TTC28-203ENST00000442232 MTTPP55157 894 aa11□□□□□ -0.65
TTC28-203ENST00000442232 LAPTM5Q13571 262 aa11□□□□□ -0.65
TTC28-203ENST00000442232 BMPR2Q13873 1038 aa11□□□□□ -0.65
TTC28-203ENST00000442232 ZNF630Q2M218 657 aaPredicted RBP11□□□□□ -0.65
TTC28-203ENST00000442232 CDKL4Q5MAI5 379 aa11□□□□□ -0.65
TTC28-203ENST00000442232 SULT1C3Q6IMI6 304 aa11□□□□□ -0.65
TTC28-203ENST00000442232 Q6ZPB1 254 aaPredicted RBP11□□□□□ -0.65
TTC28-203ENST00000442232 CTAGE3PQ8IX95 158 aa11□□□□□ -0.65
TTC28-203ENST00000442232 TMEM132CQ8N3T6 1108 aa11□□□□□ -0.65
TTC28-203ENST00000442232 OR2L5Q8NG80 312 aa11□□□□□ -0.65
TTC28-203ENST00000442232 EXT2Q93063 718 aa11□□□□□ -0.65
TTC28-203ENST00000442232 NCLNQ969V3 563 aa11□□□□□ -0.65
TTC28-203ENST00000442232 MS4A6EQ96DS6 147 aa11□□□□□ -0.65
TTC28-203ENST00000442232 PTCD3Q96EY7 689 aaKnown RBP11□□□□□ -0.65
TTC28-203ENST00000442232 SERINC2Q96SA4 455 aa11□□□□□ -0.65
TTC28-203ENST00000442232 DPH5Q9H2P9 285 aa11□□□□□ -0.65
TTC28-203ENST00000442232 EHD1Q9H4M9 534 aa11□□□□□ -0.65
TTC28-203ENST00000442232 TRIM45Q9H8W5 580 aaPredicted RBP11□□□□□ -0.65
TTC28-203ENST00000442232 CAB39LQ9H9S4 337 aa11□□□□□ -0.65
TTC28-203ENST00000442232 ADAP2Q9NPF8 381 aa11□□□□□ -0.65
TTC28-203ENST00000442232 TIMMDC1Q9NPL8 285 aa11□□□□□ -0.65
TTC28-203ENST00000442232 WHRNQ9P202 907 aa11□□□□□ -0.65
TTC28-203ENST00000442232 ERVK-11Q9UQG0 969 aa11□□□□□ -0.65
TTC28-203ENST00000442232 ZNF835Q9Y2P0 537 aa11□□□□□ -0.65
TTC28-203ENST00000442232 MTO1Q9Y2Z2 717 aaKnown RBP11□□□□□ -0.65
TTC28-203ENST00000442232 MEMO1Q9Y316 297 aa11□□□□□ -0.65
TTC28-203ENST00000442232 CTAGE15A4D2H0 777 aa10.99□□□□□ -0.65
TTC28-203ENST00000442232 LRIT2A6NDA9 550 aa10.99□□□□□ -0.65
TTC28-203ENST00000442232 A8MVJ9 347 aa10.99□□□□□ -0.65
TTC28-203ENST00000442232 PHGDHO43175 533 aaKnown RBP10.99□□□□□ -0.65
TTC28-203ENST00000442232 CDC40O60508 579 aaKnown RBP eCLIP10.99□□□□□ -0.65
TTC28-203ENST00000442232 CCNT2O60583 730 aaKnown RBP10.99□□□□□ -0.65
TTC28-203ENST00000442232 ITGA10O75578 1167 aa10.99□□□□□ -0.65
TTC28-203ENST00000442232 ZFAND5O76080 213 aa10.99□□□□□ -0.65
TTC28-203ENST00000442232 SNRPB2P08579 225 aaKnown RBP10.99□□□□□ -0.65
TTC28-203ENST00000442232 GSTA2P09210 222 aa10.99□□□□□ -0.65
TTC28-203ENST00000442232 CERS1P27544 350 aa10.99□□□□□ -0.65
TTC28-203ENST00000442232 GRNP28799 593 aaKnown RBP10.99□□□□□ -0.65
TTC28-203ENST00000442232 HNRNPH1P31943 449 aaKnown RBP10.99□□□□□ -0.65
TTC28-203ENST00000442232 SPRP35270 261 aaPredicted RBP10.99□□□□□ -0.65
TTC28-203ENST00000442232 GP5P40197 560 aa10.99□□□□□ -0.65
TTC28-203ENST00000442232 KCNC1P48547 511 aa10.99□□□□□ -0.65
TTC28-203ENST00000442232 ADORA2A-AS1P86434 159 aa10.99□□□□□ -0.65
TTC28-203ENST00000442232 STX4Q12846 297 aa10.99□□□□□ -0.65
TTC28-203ENST00000442232 SLMAPQ14BN4 828 aa10.99□□□□□ -0.65
TTC28-203ENST00000442232 EFTUD2Q15029 972 aaKnown RBP eCLIP10.99□□□□□ -0.65
TTC28-203ENST00000442232 ELAVL1Q15717 326 aaKnown RBP10.99□□□□□ -0.65
TTC28-203ENST00000442232 C18orf21Q32NC0 220 aaPredicted RBP10.99□□□□□ -0.65
TTC28-203ENST00000442232 ZNF468Q5VIY5 522 aaPredicted RBP10.99□□□□□ -0.65
TTC28-203ENST00000442232 RAPH1Q70E73 1250 aa10.99□□□□□ -0.65
TTC28-203ENST00000442232 LRRC70Q7Z2Q7 622 aa10.99□□□□□ -0.65
TTC28-203ENST00000442232 CLNKQ7Z7G1 428 aa10.99□□□□□ -0.65
TTC28-203ENST00000442232 CTAGE6Q86UF2 777 aa10.99□□□□□ -0.65
TTC28-203ENST00000442232 SIAH3Q8IW03 269 aa10.99□□□□□ -0.65
TTC28-203ENST00000442232 SCUBE1Q8IWY4 988 aa10.99□□□□□ -0.65
TTC28-203ENST00000442232 GPALPP1Q8IXQ4 340 aa10.99□□□□□ -0.65
TTC28-203ENST00000442232 SPATA6LQ8N4H0 392 aa10.99□□□□□ -0.65
TTC28-203ENST00000442232 SRFBP1Q8NEF9 429 aaKnown RBP10.99□□□□□ -0.65
TTC28-203ENST00000442232 NFAM1Q8NET5 270 aaPredicted RBP10.99□□□□□ -0.65
TTC28-203ENST00000442232 AGAP11Q8TF27 550 aa10.99□□□□□ -0.65
TTC28-203ENST00000442232 DAZLQ92904 295 aaKnown RBP10.99□□□□□ -0.65
TTC28-203ENST00000442232 UBE2E3Q969T4 207 aa10.99□□□□□ -0.65
TTC28-203ENST00000442232 KIAA1191Q96A73 305 aa10.99□□□□□ -0.65
TTC28-203ENST00000442232 KCNC2Q96PR1 638 aa10.99□□□□□ -0.65
TTC28-203ENST00000442232 GPR22Q99680 433 aa10.99□□□□□ -0.65
TTC28-203ENST00000442232 RBBP8Q99708 897 aa10.99□□□□□ -0.65
TTC28-203ENST00000442232 ERP44Q9BS26 406 aa10.99□□□□□ -0.65
TTC28-203ENST00000442232 TMEM79Q9BSE2 394 aa10.99□□□□□ -0.65
TTC28-203ENST00000442232 HPF1Q9NWY4 346 aa10.99□□□□□ -0.65
TTC28-203ENST00000442232 COQ3Q9NZJ6 369 aa10.99□□□□□ -0.65
TTC28-203ENST00000442232 YARS2Q9Y2Z4 477 aaKnown RBP10.99□□□□□ -0.65
TTC28-203ENST00000442232 CLCA3PQ9Y6N3 262 aa10.99□□□□□ -0.65
TTC28-203ENST00000442232 E9PLN8 166 aa10.98□□□□□ -0.65
TTC28-203ENST00000442232 ACOT7O00154 380 aa10.98□□□□□ -0.65
TTC28-203ENST00000442232 PEX1O43933 1283 aa10.98□□□□□ -0.65
TTC28-203ENST00000442232 TUBB4AP04350 444 aa10.98□□□□□ -0.65
TTC28-203ENST00000442232 TPOP07202 933 aa10.98□□□□□ -0.65
TTC28-203ENST00000442232 PRF1P14222 555 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms