RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 SNX31Q8N9S9 440 aa15.22■□□□□ 0.03
SNRPD3-204ENST00000439775 FAM98AQ8NCA5 519 aaKnown RBP15.22■□□□□ 0.03
SNRPD3-204ENST00000439775 B3GNT7Q8NFL0 401 aa15.22■□□□□ 0.03
SNRPD3-204ENST00000439775 STAG3L4Q8TBR4 150 aa15.22■□□□□ 0.03
SNRPD3-204ENST00000439775 SERINC2Q96SA4 455 aa15.22■□□□□ 0.03
SNRPD3-204ENST00000439775 ZNF490Q9ULM2 529 aaPredicted RBP15.22■□□□□ 0.03
SNRPD3-204ENST00000439775 MRPS33Q9Y291 106 aaKnown RBP15.22■□□□□ 0.03
SNRPD3-204ENST00000439775 CLDN16Q9Y5I7 305 aa15.22■□□□□ 0.03
SNRPD3-204ENST00000439775 ZGRF1Q86YA3 2104 aa15.22■□□□□ 0.03
SNRPD3-204ENST00000439775 CENPEQ02224 2701 aa15.21■□□□□ 0.03
SNRPD3-204ENST00000439775 TRGV8A0A0C4DH27 118 aa15.21■□□□□ 0.03
SNRPD3-204ENST00000439775 A0A0G2JN53 185 aa15.21■□□□□ 0.03
SNRPD3-204ENST00000439775 CLDN4O14493 209 aa15.21■□□□□ 0.03
SNRPD3-204ENST00000439775 FCHO1O14526 889 aa15.21■□□□□ 0.03
SNRPD3-204ENST00000439775 EPORP19235 508 aa15.21■□□□□ 0.03
SNRPD3-204ENST00000439775 CRABP2P29373 138 aa15.21■□□□□ 0.03
SNRPD3-204ENST00000439775 CASP2P42575 452 aa15.21■□□□□ 0.03
SNRPD3-204ENST00000439775 CYB561P49447 251 aa15.21■□□□□ 0.03
SNRPD3-204ENST00000439775 PLA2G16P53816 162 aa15.21■□□□□ 0.03
SNRPD3-204ENST00000439775 TGM3Q08188 693 aa15.21■□□□□ 0.03
SNRPD3-204ENST00000439775 RCN2Q14257 317 aa15.21■□□□□ 0.03
SNRPD3-204ENST00000439775 SLMAPQ14BN4 828 aa15.21■□□□□ 0.03
SNRPD3-204ENST00000439775 KRTCAP3Q53RY4 240 aa15.21■□□□□ 0.03
SNRPD3-204ENST00000439775 FBXO48Q5FWF7 155 aa15.21■□□□□ 0.03
SNRPD3-204ENST00000439775 ZNF468Q5VIY5 522 aaPredicted RBP15.21■□□□□ 0.03
SNRPD3-204ENST00000439775 ADNP2Q6IQ32 1131 aa15.21■□□□□ 0.03
SNRPD3-204ENST00000439775 SLC25A25Q6KCM7 469 aa15.21■□□□□ 0.03
SNRPD3-204ENST00000439775 MTFR2Q6P444 385 aa15.21■□□□□ 0.03
SNRPD3-204ENST00000439775 ABHD17CQ6PCB6 329 aa15.21■□□□□ 0.03
SNRPD3-204ENST00000439775 GALNTL5Q7Z4T8 443 aa15.21■□□□□ 0.03
SNRPD3-204ENST00000439775 ISCA2Q86U28 154 aa15.21■□□□□ 0.03
SNRPD3-204ENST00000439775 ZNF595Q8IYB9 648 aa15.21■□□□□ 0.03
SNRPD3-204ENST00000439775 FBF1Q8TES7 1133 aa15.21■□□□□ 0.03
SNRPD3-204ENST00000439775 UBTD2Q8WUN7 234 aa15.21■□□□□ 0.03
SNRPD3-204ENST00000439775 ESAMQ96AP7 390 aa15.21■□□□□ 0.03
SNRPD3-204ENST00000439775 GPR137Q96N19 417 aa15.21■□□□□ 0.03
SNRPD3-204ENST00000439775 DEFB126Q9BYW3 111 aa15.21■□□□□ 0.03
SNRPD3-204ENST00000439775 CD244Q9BZW8 370 aa15.21■□□□□ 0.03
SNRPD3-204ENST00000439775 ALG9Q9H6U8 611 aa15.21■□□□□ 0.03
SNRPD3-204ENST00000439775 NMRAL1Q9HBL8 299 aa15.21■□□□□ 0.03
SNRPD3-204ENST00000439775 PRTFDC1Q9NRG1 225 aa15.21■□□□□ 0.03
SNRPD3-204ENST00000439775 NUDT4Q9NZJ9 180 aa15.21■□□□□ 0.03
SNRPD3-204ENST00000439775 SUCOQ9UBS9 1254 aaKnown RBP15.21■□□□□ 0.03
SNRPD3-204ENST00000439775 DAPP1Q9UN19 280 aa15.21■□□□□ 0.03
SNRPD3-204ENST00000439775 TGFBR3LH3BV60 316 aa15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 NME2P1O60361 137 aa15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 CCNT2O60583 730 aaKnown RBP15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 SLC19A2O60779 497 aa15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 KERAO60938 352 aa15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 FAM155BO75949 473 aa15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 MYO1DO94832 1006 aa15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 TFEBP19484 476 aa15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 NME2P22392 152 aa15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 CERS1P27544 350 aa15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 KCNC1P48547 511 aa15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 ST13P50502 369 aaKnown RBP15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 HLCSP50747 726 aa15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 CLCN2P51788 898 aa15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 HNRNPFP52597 415 aaKnown RBP15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 MTTPP55157 894 aa15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 LIM2P55344 173 aa15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 ALDH6A1Q02252 535 aaKnown RBP15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 IRF8Q02556 426 aa15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 GUCY2DQ02846 1103 aa15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 SRSF11Q05519 484 aaKnown RBP15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 PCDH1Q08174 1060 aa15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 DLG1Q12959 904 aa15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 SLC13A2Q13183 592 aa15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 TRADDQ15628 312 aa15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 HIST2H2ACQ16777 129 aaPredicted RBP15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 HIST2H2AA3Q6FI13 130 aa15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 RAPH1Q70E73 1250 aa15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 CCDC91Q7Z6B0 441 aa15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 CMC1Q7Z7K0 106 aa15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 TBC1D1Q86TI0 1168 aaPredicted RBP15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 ZNF227Q86WZ6 799 aa15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 SIAH3Q8IW03 269 aa15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 C17orf53Q8N3J3 647 aaPredicted RBP15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 FAM47BQ8NA70 645 aa15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 TMEM52Q8NDY8 209 aa15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 EXT2Q93063 718 aa15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 VMP1Q96GC9 406 aa15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 KCNC2Q96PR1 638 aa15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 ATOH8Q96SQ7 321 aa15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 ROGDIQ9GZN7 287 aa15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 COPS7BQ9H9Q2 264 aaPredicted RBP15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 ADAP2Q9NPF8 381 aa15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 IGSF5Q9NSI5 407 aa15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 ASB1Q9Y576 335 aa15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 ITPR2Q14571 2701 aa15.2■□□□□ 0.02
SNRPD3-204ENST00000439775 DIDO1Q9BTC0 2240 aaKnown RBP15.19■□□□□ 0.02
SNRPD3-204ENST00000439775 TRBV11-1A0A0K0K1C0 115 aa15.19■□□□□ 0.02
SNRPD3-204ENST00000439775 CCDC189A1A4V9 331 aa15.19■□□□□ 0.02
SNRPD3-204ENST00000439775 A8MUA0 341 aa15.19■□□□□ 0.02
SNRPD3-204ENST00000439775 CYR61O00622 381 aa15.19■□□□□ 0.02
SNRPD3-204ENST00000439775 LTA4HP09960 611 aaKnown RBP15.19■□□□□ 0.02
SNRPD3-204ENST00000439775 SERPINB1P30740 379 aa15.19■□□□□ 0.02
SNRPD3-204ENST00000439775 GMPRP36959 345 aa15.19■□□□□ 0.02
SNRPD3-204ENST00000439775 CASP6P55212 293 aa15.19■□□□□ 0.02
SNRPD3-204ENST00000439775 CHIT1Q13231 466 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms