RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 CES4AQ5XG92 561 aa16.7■□□□□ 0.26
CCDC188-201ENST00000439765 ATG16L1Q676U5 607 aa16.7■□□□□ 0.26
CCDC188-201ENST00000439765 HIST2H2AA3Q6FI13 130 aa16.7■□□□□ 0.26
CCDC188-201ENST00000439765 FAAH2Q6GMR7 532 aa16.7■□□□□ 0.26
CCDC188-201ENST00000439765 GRHL2Q6ISB3 625 aa16.7■□□□□ 0.26
CCDC188-201ENST00000439765 MED27Q6P2C8 311 aa16.7■□□□□ 0.26
CCDC188-201ENST00000439765 OR52B6Q8NGF0 335 aa16.7■□□□□ 0.26
CCDC188-201ENST00000439765 ZNF483Q8TF39 744 aaPredicted RBP16.7■□□□□ 0.26
CCDC188-201ENST00000439765 CNDP1Q96KN2 507 aa16.7■□□□□ 0.26
CCDC188-201ENST00000439765 IP6K3Q96PC2 410 aa16.7■□□□□ 0.26
CCDC188-201ENST00000439765 CDK15Q96Q40 435 aa16.7■□□□□ 0.26
CCDC188-201ENST00000439765 GSTO2Q9H4Y5 243 aa16.7■□□□□ 0.26
CCDC188-201ENST00000439765 NT5DC2Q9H857 520 aa16.7■□□□□ 0.26
CCDC188-201ENST00000439765 SEMA3GQ9NS98 782 aa16.7■□□□□ 0.26
CCDC188-201ENST00000439765 FBXL4Q9UKA2 621 aa16.7■□□□□ 0.26
CCDC188-201ENST00000439765 MAST4O15021 2626 aa16.7■□□□□ 0.26
CCDC188-201ENST00000439765 USP9XQ93008 2570 aaPredicted RBP16.7■□□□□ 0.26
CCDC188-201ENST00000439765 LRIT2A6NDA9 550 aa16.69■□□□□ 0.26
CCDC188-201ENST00000439765 SOCS6O14544 535 aa16.69■□□□□ 0.26
CCDC188-201ENST00000439765 KLF11O14901 512 aa16.69■□□□□ 0.26
CCDC188-201ENST00000439765 NPHS1O60500 1241 aa16.69■□□□□ 0.26
CCDC188-201ENST00000439765 SH3BGRLO75368 114 aa16.69■□□□□ 0.26
CCDC188-201ENST00000439765 CDC123O75794 336 aaPredicted RBP16.69■□□□□ 0.26
CCDC188-201ENST00000439765 BMP10O95393 424 aa16.69■□□□□ 0.26
CCDC188-201ENST00000439765 TBX6O95947 436 aaPredicted RBP16.69■□□□□ 0.26
CCDC188-201ENST00000439765 CASP2P42575 452 aa16.69■□□□□ 0.26
CCDC188-201ENST00000439765 EFNA3P52797 238 aa16.69■□□□□ 0.26
CCDC188-201ENST00000439765 SKP1P63208 163 aa16.69■□□□□ 0.26
CCDC188-201ENST00000439765 CLCQ05315 142 aa16.69■□□□□ 0.26
CCDC188-201ENST00000439765 STX3Q13277 289 aa16.69■□□□□ 0.26
CCDC188-201ENST00000439765 RNF175Q8N4F7 328 aa16.69■□□□□ 0.26
CCDC188-201ENST00000439765 LRRC8CQ8TDW0 803 aa16.69■□□□□ 0.26
CCDC188-201ENST00000439765 PPP4R1Q8TF05 950 aa16.69■□□□□ 0.26
CCDC188-201ENST00000439765 GAL3ST3Q96A11 431 aa16.69■□□□□ 0.26
CCDC188-201ENST00000439765 C8orf44Q96CB5 159 aa16.69■□□□□ 0.26
CCDC188-201ENST00000439765 MS4A6EQ96DS6 147 aa16.69■□□□□ 0.26
CCDC188-201ENST00000439765 PEX11GQ96HA9 241 aa16.69■□□□□ 0.26
CCDC188-201ENST00000439765 SEC16BQ96JE7 1060 aa16.69■□□□□ 0.26
CCDC188-201ENST00000439765 TGIF2Q9GZN2 237 aa16.69■□□□□ 0.26
CCDC188-201ENST00000439765 NOL11Q9H8H0 719 aaKnown RBP16.69■□□□□ 0.26
CCDC188-201ENST00000439765 SEMA4BQ9NPR2 832 aaPredicted RBP16.69■□□□□ 0.26
CCDC188-201ENST00000439765 MKL2Q9ULH7 1088 aa16.69■□□□□ 0.26
CCDC188-201ENST00000439765 K7EM74 188 aa16.68■□□□□ 0.26
CCDC188-201ENST00000439765 OR7A17O14581 309 aa16.68■□□□□ 0.26
CCDC188-201ENST00000439765 DNAJB6O75190 326 aa16.68■□□□□ 0.26
CCDC188-201ENST00000439765 HEXBP07686 556 aa16.68■□□□□ 0.26
CCDC188-201ENST00000439765 SERPINB5P36952 375 aa16.68■□□□□ 0.26
CCDC188-201ENST00000439765 CCL11P51671 97 aa16.68■□□□□ 0.26
CCDC188-201ENST00000439765 CCNG1P51959 295 aa16.68■□□□□ 0.26
CCDC188-201ENST00000439765 PLA2G16P53816 162 aa16.68■□□□□ 0.26
CCDC188-201ENST00000439765 EMP2P54851 167 aa16.68■□□□□ 0.26
CCDC188-201ENST00000439765 RRADP55042 308 aa16.68■□□□□ 0.26
CCDC188-201ENST00000439765 CDH13P55290 713 aa16.68■□□□□ 0.26
CCDC188-201ENST00000439765 FOXK1P85037 733 aa16.68■□□□□ 0.26
CCDC188-201ENST00000439765 BST1Q10588 318 aa16.68■□□□□ 0.26
CCDC188-201ENST00000439765 CPSF6Q16630 551 aaKnown RBP eCLIP16.68■□□□□ 0.26
CCDC188-201ENST00000439765 DCAF10Q5QP82 559 aa16.68■□□□□ 0.26
CCDC188-201ENST00000439765 TTC19Q6DKK2 380 aaPredicted RBP16.68■□□□□ 0.26
CCDC188-201ENST00000439765 KIRREL2Q6UWL6 708 aa16.68■□□□□ 0.26
CCDC188-201ENST00000439765 RGS9BPQ6ZS82 235 aa16.68■□□□□ 0.26
CCDC188-201ENST00000439765 FRMD7Q6ZUT3 714 aa16.68■□□□□ 0.26
CCDC188-201ENST00000439765 MED25Q71SY5 747 aa16.68■□□□□ 0.26
CCDC188-201ENST00000439765 LAS2Q8IYD9 372 aa16.68■□□□□ 0.26
CCDC188-201ENST00000439765 TMEM102Q8N9M5 508 aaPredicted RBP16.68■□□□□ 0.26
CCDC188-201ENST00000439765 OR7G3Q8NG95 312 aa16.68■□□□□ 0.26
CCDC188-201ENST00000439765 UBE2E3Q969T4 207 aa16.68■□□□□ 0.26
CCDC188-201ENST00000439765 ATP6V1E2Q96A05 226 aa16.68■□□□□ 0.26
CCDC188-201ENST00000439765 REXO4Q9GZR2 422 aaKnown RBP16.68■□□□□ 0.26
CCDC188-201ENST00000439765 RHBGQ9H310 441 aa16.68■□□□□ 0.26
CCDC188-201ENST00000439765 CCDC134Q9H6E4 229 aa16.68■□□□□ 0.26
CCDC188-201ENST00000439765 ZBTB26Q9HCK0 441 aa16.68■□□□□ 0.26
CCDC188-201ENST00000439765 RNF11Q9Y3C5 154 aa16.68■□□□□ 0.26
CCDC188-201ENST00000439765 RELNP78509 3460 aa16.68■□□□□ 0.26
CCDC188-201ENST00000439765 HIVEP3Q5T1R4 2406 aa16.67■□□□□ 0.26
CCDC188-201ENST00000439765 OR2W5A6NFC9 320 aa16.67■□□□□ 0.26
CCDC188-201ENST00000439765 A6NL46 340 aa16.67■□□□□ 0.26
CCDC188-201ENST00000439765 TMEM114B3SHH9 223 aa16.67■□□□□ 0.26
CCDC188-201ENST00000439765 ITM2AO43736 263 aa16.67■□□□□ 0.26
CCDC188-201ENST00000439765 ACPPP15309 386 aa16.67■□□□□ 0.26
CCDC188-201ENST00000439765 TSPAN8P19075 237 aa16.67■□□□□ 0.26
CCDC188-201ENST00000439765 SLC1A6P48664 564 aa16.67■□□□□ 0.26
CCDC188-201ENST00000439765 ABCE1P61221 599 aaKnown RBP16.67■□□□□ 0.26
CCDC188-201ENST00000439765 BTN3A2P78410 334 aa16.67■□□□□ 0.26
CCDC188-201ENST00000439765 EEF1A2Q05639 463 aaKnown RBP16.67■□□□□ 0.26
CCDC188-201ENST00000439765 PCDH1Q08174 1060 aa16.67■□□□□ 0.26
CCDC188-201ENST00000439765 TRAF3Q13114 568 aa16.67■□□□□ 0.26
CCDC188-201ENST00000439765 RAPSNQ13702 412 aa16.67■□□□□ 0.26
CCDC188-201ENST00000439765 RCN2Q14257 317 aa16.67■□□□□ 0.26
CCDC188-201ENST00000439765 LIPJQ5W064 366 aa16.67■□□□□ 0.26
CCDC188-201ENST00000439765 TRIM40Q6P9F5 258 aa16.67■□□□□ 0.26
CCDC188-201ENST00000439765 ASB18Q6ZVZ8 466 aa16.67■□□□□ 0.26
CCDC188-201ENST00000439765 CLEC1AQ8NC01 280 aa16.67■□□□□ 0.26
CCDC188-201ENST00000439765 OR2L5Q8NG80 312 aa16.67■□□□□ 0.26
CCDC188-201ENST00000439765 HUS1BQ8NHY5 278 aa16.67■□□□□ 0.26
CCDC188-201ENST00000439765 TRPC4APQ8TEL6 797 aa16.67■□□□□ 0.26
CCDC188-201ENST00000439765 FAR2Q96K12 515 aa16.67■□□□□ 0.26
CCDC188-201ENST00000439765 MTERF1Q99551 399 aaKnown RBP16.67■□□□□ 0.26
CCDC188-201ENST00000439765 TRMOQ9BU70 441 aa16.67■□□□□ 0.26
CCDC188-201ENST00000439765 MS4A8Q9BY19 250 aa16.67■□□□□ 0.26
CCDC188-201ENST00000439765 VN1R1Q9GZP7 353 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms