RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 GJA1P17302 382 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 PSPHP78330 225 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 ATAT1Q5SQI0 421 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 FBXL22Q6P050 247 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 DPY19L3Q6ZPD9 716 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 DNAJB7Q7Z6W7 309 aaPredicted RBP8.22□□□□□ -1.09
HPS4-206ENST00000439453 SLC5A8Q8N695 610 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 YIPF7Q8N8F6 280 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 UTP15Q8TED0 518 aaKnown RBP8.22□□□□□ -1.09
HPS4-206ENST00000439453 RSPRY1Q96DX4 576 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 OMA1Q96E52 524 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 WDFY2Q96P53 400 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 EGFL8Q99944 293 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 DPH2Q9BQC3 489 aaPredicted RBP8.22□□□□□ -1.09
HPS4-206ENST00000439453 CDCA4Q9BXL8 241 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 RNF121Q9H920 327 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 DIABLOQ9NR28 239 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 TMEM184CQ9NVA4 438 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 TRPS1Q9UHF7 1281 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 DHRS7Q9Y394 339 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 SLC35F4A4IF30 521 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 B8ZZF3 427 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 H3BM21 787 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 STX7O15400 261 aaKnown RBP8.22□□□□□ -1.09
HPS4-206ENST00000439453 TSPAN3O60637 253 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 LRATO95237 230 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 CCNYL3P0C7X3 344 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 LPOP22079 712 aaPredicted RBP8.22□□□□□ -1.09
HPS4-206ENST00000439453 GZMKP49863 264 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 RORCP51449 518 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 DOC2BQ14184 412 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 IDO2Q6ZQW0 420 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 NELL1Q92832 810 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 FGF13Q92913 245 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 USP7Q93009 1102 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 ULK4Q96C45 1275 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 REPS1Q96D71 796 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 TRMT2BQ96GJ1 504 aaKnown RBP8.22□□□□□ -1.09
HPS4-206ENST00000439453 C8orf48Q96LL4 319 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 TAPBPLQ9BX59 468 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 ACPTQ9BZG2 426 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 BPIFA1Q9NP55 256 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 IMPAD1Q9NX62 359 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 WWOXQ9NZC7 414 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 CMAHPQ9Y471 501 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 NCOR1O75376 2440 aa8.21□□□□□ -1.09
HPS4-206ENST00000439453 IGLV3-10A0A075B6K4 115 aa8.21□□□□□ -1.09
HPS4-206ENST00000439453 SLC38A8A6NNN8 435 aa8.21□□□□□ -1.09
HPS4-206ENST00000439453 MEN1O00255 615 aa8.21□□□□□ -1.09
HPS4-206ENST00000439453 TNFRSF11BO00300 401 aa8.21□□□□□ -1.09
HPS4-206ENST00000439453 SHOXO15266 292 aa8.21□□□□□ -1.09
HPS4-206ENST00000439453 NOS1APO75052 506 aaPredicted RBP8.21□□□□□ -1.09
HPS4-206ENST00000439453 LRG1P02750 347 aa8.21□□□□□ -1.09
HPS4-206ENST00000439453 CSF2P04141 144 aa8.21□□□□□ -1.09
HPS4-206ENST00000439453 TACR1P25103 407 aa8.21□□□□□ -1.09
HPS4-206ENST00000439453 PSMA3P25788 255 aa8.21□□□□□ -1.09
HPS4-206ENST00000439453 HLA-DMAP28067 261 aa8.21□□□□□ -1.09
HPS4-206ENST00000439453 KCNJ10P78508 379 aa8.21□□□□□ -1.09
HPS4-206ENST00000439453 C5orf22Q49AR2 442 aa8.21□□□□□ -1.09
HPS4-206ENST00000439453 NLRP8Q86W28 1048 aa8.21□□□□□ -1.09
HPS4-206ENST00000439453 OR10G2Q8NGC3 310 aa8.21□□□□□ -1.09
HPS4-206ENST00000439453 VANGL1Q8TAA9 524 aaPredicted RBP8.21□□□□□ -1.09
HPS4-206ENST00000439453 ING5Q8WYH8 240 aa8.21□□□□□ -1.09
HPS4-206ENST00000439453 FGF14Q92915 247 aa8.21□□□□□ -1.09
HPS4-206ENST00000439453 TESCQ96BS2 214 aa8.21□□□□□ -1.09
HPS4-206ENST00000439453 RPP25Q9BUL9 199 aaKnown RBP8.21□□□□□ -1.09
HPS4-206ENST00000439453 CD244Q9BZW8 370 aa8.21□□□□□ -1.09
HPS4-206ENST00000439453 SNTG1Q9NSN8 517 aa8.21□□□□□ -1.09
HPS4-206ENST00000439453 ACTL7AQ9Y615 435 aa8.21□□□□□ -1.09
HPS4-206ENST00000439453 FPGTO14772 594 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 AKR7A2O43488 359 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 EBLN1P0CF75 366 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 PRPS2P11908 318 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 CBLP22681 906 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 PTGER3P43115 390 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 AP2S1P53680 142 aaPredicted RBP8.21□□□□□ -1.1
HPS4-206ENST00000439453 TNK1Q13470 666 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 HTR4Q13639 388 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 QPRTQ15274 297 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 ESCO2Q56NI9 601 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 SLC35F1Q5T1Q4 408 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 FAM131AQ6UXB0 335 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 ZNF767PQ75MW2 155 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 GET4Q7L5D6 327 aaPredicted RBP8.21□□□□□ -1.1
HPS4-206ENST00000439453 SPATA2LQ8IUW3 424 aaPredicted RBP8.21□□□□□ -1.1
HPS4-206ENST00000439453 LSMEM1Q8N8F7 131 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 OR4M1Q8NGD0 313 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 WDR36Q8NI36 951 aaKnown RBP8.21□□□□□ -1.1
HPS4-206ENST00000439453 LRRC3BQ96PB8 259 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 PLA2G2FQ9BZM2 168 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 FAM83DQ9H4H8 585 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 C11orf16Q9NQ32 467 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 RLIMQ9NVW2 624 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 TEKT2Q9UIF3 430 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 KLHL21Q9UJP4 597 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 AGRPO00253 132 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 CDK2AP1O14519 115 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 EPN2O95208 641 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 CSF3P09919 207 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 LAMP2P13473 410 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms