RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 C4orf19Q8IY42 314 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 EID3Q8N140 333 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 OR8H3Q8N146 312 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 NOA1Q8NC60 698 aaKnown RBP2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 TYMSOSQ8TAI1 123 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 C11orf45Q8TAV5 145 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 NPRL2Q8WTW4 380 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 GATAD1Q8WUU5 269 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 SEPT1Q8WYJ6 367 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 RAD54LQ92698 747 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 PROX1Q92786 737 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 MLPHQ9BV36 600 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 THUMPD3Q9BV44 507 aaKnown RBP2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 KATNB1Q9BVA0 655 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 ZMYND12Q9H0C1 365 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 B3GAT2Q9NPZ5 323 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 FAM207AQ9NSI2 230 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 ANAPC11Q9NYG5 84 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 NYAP2Q9P242 653 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 TNNQ9UQP3 1299 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 TMED3Q9Y3Q3 217 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 POMT1Q9Y6A1 747 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 COL4A4P53420 1690 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 DLC1Q96QB1 1528 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 NINLQ9Y2I6 1382 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 KIAA1551Q9HCM1 1747 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 BTAF1O14981 1849 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 C5orf52A6NGY3 159 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 SHISA9B4DS77 424 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 SLC30A4O14863 429 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 TFECO14948 347 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 GLRA3O75311 464 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 CDK2AP2O75956 126 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 PGLSO95336 258 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 ZFYP08048 801 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 FAM58BPP0C7Q3 252 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 SPP1P10451 314 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 KLK2P20151 261 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 JAK1P23458 1154 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 TIA1P31483 386 aaKnown RBP eCLIP2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 CSTF2P33240 577 aaKnown RBP eCLIP2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 DRD3P35462 400 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 LBX1P52954 281 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 TAF10Q12962 218 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 MTF1Q14872 753 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 EFTUD2Q15029 972 aaKnown RBP eCLIP2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 PTGISQ16647 500 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 ALDH1L2Q3SY69 923 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 LRRC73Q5JTD7 316 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 FHL5Q5TD97 284 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 LCN1P1Q5VSP4 162 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 TXNRD3NBQ6F5E7 133 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 OR4A47Q6IF82 309 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 GDPGP1Q6ZNW5 385 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 FAM47EQ6ZV65 393 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 RTN4RL2Q86UN3 420 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 AMIGO1Q86WK6 493 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 LGI2Q8N0V4 545 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 OR1L3Q8NH93 324 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 OCC1Q8TAD7 63 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 SLC26A7Q8TE54 656 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 KCNE4Q8WWG9 221 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 PIGBQ92521 554 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 ATXN7L3BQ96GX2 97 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 MAP3K3Q99759 626 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 NKX3-1Q99801 234 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 GTPBP2Q9BX10 602 aaKnown RBP2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 TDRD1Q9BXT4 1180 aaKnown RBP2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 OR2B2Q9GZK3 357 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 THAP2Q9H0W7 228 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 TUBB1Q9H4B7 451 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 ACTL8Q9H568 366 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 TLE6Q9H808 572 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 LMAN1LQ9HAT1 526 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 CHCHD3Q9NX63 227 aaKnown RBP2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 LEF1Q9UJU2 399 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 VSIG4Q9Y279 399 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 ZNF256Q9Y2P7 627 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 WIPI2Q9Y4P8 454 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 COL18A1P39060 1754 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 TOGARAM1Q9Y4F4 1720 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 NRXN1Q9ULB1 1477 aa2.45□□□□□ -2.02
HMGB1P31-201ENST00000437242 ATP10DQ9P241 1426 aa2.44□□□□□ -2.02
HMGB1P31-201ENST00000437242 ANKRD50Q9ULJ7 1429 aa2.44□□□□□ -2.02
HMGB1P31-201ENST00000437242 A0A1W2PPW3 197 aa2.44□□□□□ -2.02
HMGB1P31-201ENST00000437242 POP4O95707 220 aaKnown RBP2.44□□□□□ -2.02
HMGB1P31-201ENST00000437242 GSRP00390 522 aa2.44□□□□□ -2.02
HMGB1P31-201ENST00000437242 AZGP1P25311 298 aaKnown RBP2.44□□□□□ -2.02
HMGB1P31-201ENST00000437242 CTNNA1P35221 906 aaKnown RBP2.44□□□□□ -2.02
HMGB1P31-201ENST00000437242 CDX1P47902 265 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P31-201ENST00000437242 MTCP1P56278 107 aa2.44□□□□□ -2.02
HMGB1P31-201ENST00000437242 LYZP61626 148 aa2.44□□□□□ -2.02
HMGB1P31-201ENST00000437242 CACNG1Q06432 222 aa2.44□□□□□ -2.02
HMGB1P31-201ENST00000437242 TRAP1Q12931 704 aaKnown RBP2.44□□□□□ -2.02
HMGB1P31-201ENST00000437242 TNK1Q13470 666 aa2.44□□□□□ -2.02
HMGB1P31-201ENST00000437242 EIF4EBP2Q13542 120 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P31-201ENST00000437242 PTK6Q13882 451 aa2.44□□□□□ -2.02
HMGB1P31-201ENST00000437242 RFTN1Q14699 578 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P31-201ENST00000437242 LACTB2Q53H82 288 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P31-201ENST00000437242 TMEM64Q6YI46 380 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms