RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 HHEXQ03014 270 aa20.1■□□□□ 0.81
PTPRF-207ENST00000436724 MTX3Q5HYI7 312 aa20.1■□□□□ 0.81
PTPRF-207ENST00000436724 TSSK4Q6SA08 328 aa20.1■□□□□ 0.81
PTPRF-207ENST00000436724 IKBIPQ70UQ0 350 aa20.1■□□□□ 0.81
PTPRF-207ENST00000436724 ZNF438Q7Z4V0 828 aa20.1■□□□□ 0.81
PTPRF-207ENST00000436724 FAM86B1Q8N7N1 296 aa20.1■□□□□ 0.81
PTPRF-207ENST00000436724 MFSD9Q8NBP5 474 aa20.1■□□□□ 0.81
PTPRF-207ENST00000436724 FAM174AQ8TBP5 190 aa20.1■□□□□ 0.81
PTPRF-207ENST00000436724 CNBD2Q96M20 576 aa20.1■□□□□ 0.81
PTPRF-207ENST00000436724 EFHD1Q9BUP0 239 aa20.1■□□□□ 0.81
PTPRF-207ENST00000436724 DDX31Q9H8H2 851 aaKnown RBP20.1■□□□□ 0.81
PTPRF-207ENST00000436724 CD320Q9NPF0 282 aa20.1■□□□□ 0.81
PTPRF-207ENST00000436724 EVPLLA8MZ36 301 aa20.1■□□□□ 0.81
PTPRF-207ENST00000436724 CTSVO60911 334 aa20.1■□□□□ 0.81
PTPRF-207ENST00000436724 ANXA6P08133 673 aa20.1■□□□□ 0.81
PTPRF-207ENST00000436724 PVRP15151 417 aa20.1■□□□□ 0.81
PTPRF-207ENST00000436724 LSSP48449 732 aa20.1■□□□□ 0.81
PTPRF-207ENST00000436724 RAB8AP61006 207 aa20.1■□□□□ 0.81
PTPRF-207ENST00000436724 SNRPNP63162 240 aaKnown RBP20.1■□□□□ 0.81
PTPRF-207ENST00000436724 MYBPC1Q00872 1141 aa20.1■□□□□ 0.81
PTPRF-207ENST00000436724 ISLR2Q6UXK2 745 aa20.1■□□□□ 0.81
PTPRF-207ENST00000436724 VN1R4Q7Z5H5 301 aa20.1■□□□□ 0.81
PTPRF-207ENST00000436724 SATL1Q86VE3 508 aa20.1■□□□□ 0.81
PTPRF-207ENST00000436724 TRPV3Q8NET8 790 aa20.1■□□□□ 0.81
PTPRF-207ENST00000436724 OR8K5Q8NH50 307 aa20.1■□□□□ 0.81
PTPRF-207ENST00000436724 DPH2Q9BQC3 489 aaPredicted RBP20.1■□□□□ 0.81
PTPRF-207ENST00000436724 EVA1BQ9NVM1 165 aa20.1■□□□□ 0.81
PTPRF-207ENST00000436724 HRASLS2Q9NWW9 162 aa20.1■□□□□ 0.81
PTPRF-207ENST00000436724 OR5K4A6NMS3 321 aa20.09■□□□□ 0.81
PTPRF-207ENST00000436724 FAM220BPB1ANY3 271 aa20.09■□□□□ 0.81
PTPRF-207ENST00000436724 CXCR6O00574 342 aa20.09■□□□□ 0.81
PTPRF-207ENST00000436724 PDGFBP01127 241 aaPredicted RBP20.09■□□□□ 0.81
PTPRF-207ENST00000436724 GPIP06744 558 aa20.09■□□□□ 0.81
PTPRF-207ENST00000436724 NME1P15531 152 aaKnown RBP20.09■□□□□ 0.81
PTPRF-207ENST00000436724 DDCP20711 480 aa20.09■□□□□ 0.81
PTPRF-207ENST00000436724 CSNK1EP49674 416 aaKnown RBP20.09■□□□□ 0.81
PTPRF-207ENST00000436724 CASP9P55211 416 aa20.09■□□□□ 0.81
PTPRF-207ENST00000436724 MAZP56270 477 aaKnown RBP20.09■□□□□ 0.81
PTPRF-207ENST00000436724 ABHD18Q0P651 414 aa20.09■□□□□ 0.81
PTPRF-207ENST00000436724 C16orf72Q14CZ0 275 aa20.09■□□□□ 0.81
PTPRF-207ENST00000436724 ADPRMQ3LIE5 342 aa20.09■□□□□ 0.81
PTPRF-207ENST00000436724 TOR1AIP1Q5JTV8 583 aa20.09■□□□□ 0.81
PTPRF-207ENST00000436724 FBXO42Q6P3S6 717 aa20.09■□□□□ 0.81
PTPRF-207ENST00000436724 GPR155Q7Z3F1 870 aa20.09■□□□□ 0.81
PTPRF-207ENST00000436724 DCP2Q8IU60 420 aaKnown RBP20.09■□□□□ 0.81
PTPRF-207ENST00000436724 TBC1D19Q8N5T2 526 aa20.09■□□□□ 0.81
PTPRF-207ENST00000436724 KCT2Q8NC54 265 aa20.09■□□□□ 0.81
PTPRF-207ENST00000436724 C1orf216Q8TAB5 229 aa20.09■□□□□ 0.81
PTPRF-207ENST00000436724 LMX1AQ8TE12 382 aa20.09■□□□□ 0.81
PTPRF-207ENST00000436724 ZFPM2Q8WW38 1151 aa20.09■□□□□ 0.81
PTPRF-207ENST00000436724 MTERF3Q96E29 417 aa20.09■□□□□ 0.81
PTPRF-207ENST00000436724 SPACA7Q96KW9 195 aa20.09■□□□□ 0.81
PTPRF-207ENST00000436724 PHF12Q96QT6 1004 aa20.09■□□□□ 0.81
PTPRF-207ENST00000436724 COQ10BQ9H8M1 238 aa20.09■□□□□ 0.81
PTPRF-207ENST00000436724 ANAPC2Q9UJX6 822 aa20.09■□□□□ 0.81
PTPRF-207ENST00000436724 A0A0A6YYD5 115 aa20.08■□□□□ 0.81
PTPRF-207ENST00000436724 C7orf72A4D263 438 aa20.08■□□□□ 0.81
PTPRF-207ENST00000436724 OR2A25A4D2G3 310 aa20.08■□□□□ 0.81
PTPRF-207ENST00000436724 WASHC1A8K0Z3 465 aa20.08■□□□□ 0.81
PTPRF-207ENST00000436724 GPR37L1O60883 481 aa20.08■□□□□ 0.81
PTPRF-207ENST00000436724 PGM3O95394 542 aa20.08■□□□□ 0.81
PTPRF-207ENST00000436724 TYRP1P17643 537 aa20.08■□□□□ 0.81
PTPRF-207ENST00000436724 GPX2P18283 190 aa20.08■□□□□ 0.81
PTPRF-207ENST00000436724 IL10P22301 178 aa20.08■□□□□ 0.81
PTPRF-207ENST00000436724 RPL3P39023 403 aaKnown RBP20.08■□□□□ 0.81
PTPRF-207ENST00000436724 FCRL6Q6DN72 434 aa20.08■□□□□ 0.81
PTPRF-207ENST00000436724 ZCCHC8Q6NZY4 707 aaKnown RBP20.08■□□□□ 0.81
PTPRF-207ENST00000436724 GOLM1Q8NBJ4 401 aa20.08■□□□□ 0.81
PTPRF-207ENST00000436724 NCLNQ969V3 563 aa20.08■□□□□ 0.81
PTPRF-207ENST00000436724 QRFPRQ96P65 431 aa20.08■□□□□ 0.81
PTPRF-207ENST00000436724 PCED1AQ9H1Q7 454 aa20.08■□□□□ 0.81
PTPRF-207ENST00000436724 GORASP2Q9H8Y8 452 aa20.08■□□□□ 0.81
PTPRF-207ENST00000436724 SCN3AQ9NY46 2000 aa20.08■□□□□ 0.8
PTPRF-207ENST00000436724 A0A0J9YVX5 310 aa20.08■□□□□ 0.8
PTPRF-207ENST00000436724 GMNNO75496 209 aa20.08■□□□□ 0.8
PTPRF-207ENST00000436724 PRKRAO75569 313 aaKnown RBP20.08■□□□□ 0.8
PTPRF-207ENST00000436724 TFAP2AP05549 437 aa20.08■□□□□ 0.8
PTPRF-207ENST00000436724 HSPA13P48723 471 aa20.08■□□□□ 0.8
PTPRF-207ENST00000436724 TMEM35AQ53FP2 167 aa20.08■□□□□ 0.8
PTPRF-207ENST00000436724 ABHD17CQ6PCB6 329 aa20.08■□□□□ 0.8
PTPRF-207ENST00000436724 TMEM26Q6ZUK4 368 aa20.08■□□□□ 0.8
PTPRF-207ENST00000436724 ERMP1Q7Z2K6 904 aa20.08■□□□□ 0.8
PTPRF-207ENST00000436724 OR5AK3PQ8NH89 298 aa20.08■□□□□ 0.8
PTPRF-207ENST00000436724 FBXO30Q8TB52 745 aa20.08■□□□□ 0.8
PTPRF-207ENST00000436724 NETO1Q8TDF5 533 aa20.08■□□□□ 0.8
PTPRF-207ENST00000436724 ZFP90Q8TF47 636 aa20.08■□□□□ 0.8
PTPRF-207ENST00000436724 RSC1A1Q92681 617 aa20.08■□□□□ 0.8
PTPRF-207ENST00000436724 REXO5Q96IC2 774 aaKnown RBP20.08■□□□□ 0.8
PTPRF-207ENST00000436724 TMEM121BQ9BXQ6 578 aaPredicted RBP20.08■□□□□ 0.8
PTPRF-207ENST00000436724 SLAMF7Q9NQ25 335 aa20.08■□□□□ 0.8
PTPRF-207ENST00000436724 PRDM7Q9NQW5 492 aa20.08■□□□□ 0.8
PTPRF-207ENST00000436724 ACSL6Q9UKU0 697 aa20.08■□□□□ 0.8
PTPRF-207ENST00000436724 VPS4AQ9UN37 437 aa20.08■□□□□ 0.8
PTPRF-207ENST00000436724 AP3M1Q9Y2T2 418 aa20.08■□□□□ 0.8
PTPRF-207ENST00000436724 A0A1W2PRB8 838 aa20.07■□□□□ 0.8
PTPRF-207ENST00000436724 SDC3O75056 442 aa20.07■□□□□ 0.8
PTPRF-207ENST00000436724 OR6B1O95007 311 aa20.07■□□□□ 0.8
PTPRF-207ENST00000436724 KCNK5O95279 499 aa20.07■□□□□ 0.8
PTPRF-207ENST00000436724 NUDT7P0C024 238 aa20.07■□□□□ 0.8
PTPRF-207ENST00000436724 HEPACAMQ14CZ8 416 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms