RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 PPA1Q15181 289 aa2.59□□□□□ -2
CLK1-204ENST00000432425 SIX1Q15475 284 aaPredicted RBP2.59□□□□□ -2
CLK1-204ENST00000432425 RNF212Q495C1 297 aa2.59□□□□□ -2
CLK1-204ENST00000432425 HSP90B2PQ58FF3 399 aa2.59□□□□□ -2
CLK1-204ENST00000432425 RNLSQ5VYX0 342 aa2.59□□□□□ -2
CLK1-204ENST00000432425 MOXD1Q6UVY6 613 aa2.59□□□□□ -2
CLK1-204ENST00000432425 REG3GQ6UW15 175 aa2.59□□□□□ -2
CLK1-204ENST00000432425 BAIAP2L2Q6UXY1 529 aa2.59□□□□□ -2
CLK1-204ENST00000432425 CHST3Q7LGC8 479 aa2.59□□□□□ -2
CLK1-204ENST00000432425 CROCCP3Q8IVE0 287 aa2.59□□□□□ -2
CLK1-204ENST00000432425 ZBED8Q8IZ13 594 aa2.59□□□□□ -2
CLK1-204ENST00000432425 ZNF619Q8N2I2 560 aa2.59□□□□□ -2
CLK1-204ENST00000432425 ZNF414Q96IQ9 312 aa2.59□□□□□ -2
CLK1-204ENST00000432425 CCDC28BQ9BUN5 200 aa2.59□□□□□ -2
CLK1-204ENST00000432425 LRRCC1Q9C099 1032 aa2.59□□□□□ -2
CLK1-204ENST00000432425 PNNQ9H307 717 aaKnown RBP2.59□□□□□ -2
CLK1-204ENST00000432425 RABEP2Q9H5N1 569 aa2.59□□□□□ -2
CLK1-204ENST00000432425 KCNK13Q9HB14 408 aa2.59□□□□□ -2
CLK1-204ENST00000432425 IARS2Q9NSE4 1012 aaKnown RBP2.59□□□□□ -2
CLK1-204ENST00000432425 MTRRQ9UBK8 725 aa2.59□□□□□ -2
CLK1-204ENST00000432425 ITM2BQ9Y287 266 aa2.59□□□□□ -2
CLK1-204ENST00000432425 NSG2Q9Y328 171 aa2.59□□□□□ -2
CLK1-204ENST00000432425 ZFP37Q9Y6Q3 630 aaPredicted RBP2.59□□□□□ -2
CLK1-204ENST00000432425 EIF4G1Q04637 1599 aaKnown RBP2.58□□□□□ -2
CLK1-204ENST00000432425 H0Y626 953 aa2.58□□□□□ -2
CLK1-204ENST00000432425 SIGLEC5O15389 551 aa2.58□□□□□ -2
CLK1-204ENST00000432425 B3GALNT1O75752 331 aa2.58□□□□□ -2
CLK1-204ENST00000432425 BBOX1O75936 387 aa2.58□□□□□ -2
CLK1-204ENST00000432425 DUX4L4P0CJ87 422 aa2.58□□□□□ -2
CLK1-204ENST00000432425 GOT1P17174 413 aa2.58□□□□□ -2
CLK1-204ENST00000432425 CTNNA2P26232 953 aa2.58□□□□□ -2
CLK1-204ENST00000432425 SSTR1P30872 391 aa2.58□□□□□ -2
CLK1-204ENST00000432425 PRPHP41219 470 aa2.58□□□□□ -2
CLK1-204ENST00000432425 ABCE1P61221 599 aaKnown RBP2.58□□□□□ -2
CLK1-204ENST00000432425 ACY1Q03154 408 aa2.58□□□□□ -2
CLK1-204ENST00000432425 TMED1Q13445 227 aa2.58□□□□□ -2
CLK1-204ENST00000432425 C3AR1Q16581 482 aa2.58□□□□□ -2
CLK1-204ENST00000432425 ZNF542PQ5EBM4 170 aa2.58□□□□□ -2
CLK1-204ENST00000432425 ZRANB3Q5FWF4 1079 aa2.58□□□□□ -2
CLK1-204ENST00000432425 TCP11X2Q5H9J9 407 aa2.58□□□□□ -2
CLK1-204ENST00000432425 KRBOX4Q5JUW0 171 aa2.58□□□□□ -2
CLK1-204ENST00000432425 FAM166AQ6J272 317 aa2.58□□□□□ -2
CLK1-204ENST00000432425 DCLRE1AQ6PJP8 1040 aa2.58□□□□□ -2
CLK1-204ENST00000432425 C11orf57Q6ZUT1 292 aaPredicted RBP2.58□□□□□ -2
CLK1-204ENST00000432425 OTUD6AQ7L8S5 288 aa2.58□□□□□ -2
CLK1-204ENST00000432425 TRMT11Q7Z4G4 463 aaKnown RBP2.58□□□□□ -2
CLK1-204ENST00000432425 NLRP14Q86W24 1093 aa2.58□□□□□ -2
CLK1-204ENST00000432425 FAM219AQ8IW50 185 aa2.58□□□□□ -2
CLK1-204ENST00000432425 DND1Q8IYX4 353 aaKnown RBP2.58□□□□□ -2
CLK1-204ENST00000432425 TEX26Q8N6G2 289 aa2.58□□□□□ -2
CLK1-204ENST00000432425 MSANTD4Q8NCY6 345 aa2.58□□□□□ -2
CLK1-204ENST00000432425 C11orf52Q96A22 123 aa2.58□□□□□ -2
CLK1-204ENST00000432425 AK8Q96MA6 479 aa2.58□□□□□ -2
CLK1-204ENST00000432425 FAM210AQ96ND0 272 aa2.58□□□□□ -2
CLK1-204ENST00000432425 TAAR6Q96RI8 345 aa2.58□□□□□ -2
CLK1-204ENST00000432425 PCDHB18PQ96TA0 734 aa2.58□□□□□ -2
CLK1-204ENST00000432425 NACAP1Q9BZK3 213 aa2.58□□□□□ -2
CLK1-204ENST00000432425 ST6GALNAC4Q9H4F1 302 aa2.58□□□□□ -2
CLK1-204ENST00000432425 GRPEL1Q9HAV7 217 aa2.58□□□□□ -2
CLK1-204ENST00000432425 IL1RAPQ9NPH3 570 aa2.58□□□□□ -2
CLK1-204ENST00000432425 FANCFQ9NPI8 374 aa2.58□□□□□ -2
CLK1-204ENST00000432425 SNX7Q9UNH6 387 aa2.58□□□□□ -2
CLK1-204ENST00000432425 RUVBL2Q9Y230 463 aaKnown RBP2.58□□□□□ -2
CLK1-204ENST00000432425 VSIG4Q9Y279 399 aa2.58□□□□□ -2
CLK1-204ENST00000432425 ATP6V0A2Q9Y487 856 aa2.58□□□□□ -2
CLK1-204ENST00000432425 SPATA31D1Q6ZQQ2 1576 aa2.58□□□□□ -2
CLK1-204ENST00000432425 TRAV18A0A075B6X5 111 aa2.57□□□□□ -2
CLK1-204ENST00000432425 TRGV8A0A0C4DH27 118 aa2.57□□□□□ -2
CLK1-204ENST00000432425 A0A1B0GTH9 108 aa2.57□□□□□ -2
CLK1-204ENST00000432425 E9PAM4 449 aa2.57□□□□□ -2
CLK1-204ENST00000432425 PRAF2O60831 178 aa2.57□□□□□ -2
CLK1-204ENST00000432425 TBX10O75333 385 aa2.57□□□□□ -2
CLK1-204ENST00000432425 MT-ND2P03891 347 aa2.57□□□□□ -2
CLK1-204ENST00000432425 SPP1P10451 314 aa2.57□□□□□ -2
CLK1-204ENST00000432425 CD1DP15813 335 aa2.57□□□□□ -2
CLK1-204ENST00000432425 DESP17661 470 aa2.57□□□□□ -2
CLK1-204ENST00000432425 FCGR2BP31994 310 aaPredicted RBP2.57□□□□□ -2
CLK1-204ENST00000432425 FCGR2CP31995 323 aa2.57□□□□□ -2
CLK1-204ENST00000432425 FEN1P39748 380 aaKnown RBP2.57□□□□□ -2
CLK1-204ENST00000432425 SH3BGRP55822 239 aaPredicted RBP2.57□□□□□ -2
CLK1-204ENST00000432425 BTG1P62324 171 aa2.57□□□□□ -2
CLK1-204ENST00000432425 IL1RL1Q01638 556 aa2.57□□□□□ -2
CLK1-204ENST00000432425 MRPL28Q13084 256 aaKnown RBP2.57□□□□□ -2
CLK1-204ENST00000432425 CAMK2DQ13557 499 aa2.57□□□□□ -2
CLK1-204ENST00000432425 GRB14Q14449 540 aa2.57□□□□□ -2
CLK1-204ENST00000432425 LASP1Q14847 261 aaKnown RBP2.57□□□□□ -2
CLK1-204ENST00000432425 UGCGQ16739 394 aa2.57□□□□□ -2
CLK1-204ENST00000432425 C1orf141Q5JVX7 400 aa2.57□□□□□ -2
CLK1-204ENST00000432425 C9orf66Q5T8R8 295 aa2.57□□□□□ -2
CLK1-204ENST00000432425 ALKBH5Q6P6C2 394 aaKnown RBP2.57□□□□□ -2
CLK1-204ENST00000432425 Q6ZVQ6 151 aa2.57□□□□□ -2
CLK1-204ENST00000432425 GPR141Q7Z602 305 aa2.57□□□□□ -2
CLK1-204ENST00000432425 ADCK2Q7Z695 626 aa2.57□□□□□ -2
CLK1-204ENST00000432425 GLRX5Q86SX6 157 aa2.57□□□□□ -2
CLK1-204ENST00000432425 CARM1Q86X55 608 aa2.57□□□□□ -2
CLK1-204ENST00000432425 CCDC170Q8IYT3 715 aa2.57□□□□□ -2
CLK1-204ENST00000432425 OR8H3Q8N146 312 aa2.57□□□□□ -2
CLK1-204ENST00000432425 AGAP11Q8TF27 550 aa2.57□□□□□ -2
CLK1-204ENST00000432425 NAA11Q9BSU3 229 aaPredicted RBP2.57□□□□□ -2
CLK1-204ENST00000432425 ALKBH7Q9BT30 221 aaPredicted RBP2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms