RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 ZBED8Q8IZ13 594 aa13.29□□□□□ -0.28
SMARCE1-205ENST00000431889 GHDCQ8N2G8 530 aa13.29□□□□□ -0.28
SMARCE1-205ENST00000431889 TMEM156Q8N614 296 aa13.29□□□□□ -0.28
SMARCE1-205ENST00000431889 TRPV3Q8NET8 790 aa13.29□□□□□ -0.28
SMARCE1-205ENST00000431889 OR52N2Q8NGI0 321 aa13.29□□□□□ -0.28
SMARCE1-205ENST00000431889 SLCO2A1Q92959 643 aa13.29□□□□□ -0.28
SMARCE1-205ENST00000431889 TMEM125Q96AQ2 219 aa13.29□□□□□ -0.28
SMARCE1-205ENST00000431889 SDCCAG3Q96C92 435 aa13.29□□□□□ -0.28
SMARCE1-205ENST00000431889 MS4A6EQ96DS6 147 aa13.29□□□□□ -0.28
SMARCE1-205ENST00000431889 FAR2Q96K12 515 aa13.29□□□□□ -0.28
SMARCE1-205ENST00000431889 TMEM79Q9BSE2 394 aa13.29□□□□□ -0.28
SMARCE1-205ENST00000431889 GPAMQ9HCL2 828 aa13.29□□□□□ -0.28
SMARCE1-205ENST00000431889 CHST11Q9NPF2 352 aa13.29□□□□□ -0.28
SMARCE1-205ENST00000431889 PRTFDC1Q9NRG1 225 aa13.29□□□□□ -0.28
SMARCE1-205ENST00000431889 TNFRSF10DQ9UBN6 386 aa13.29□□□□□ -0.28
SMARCE1-205ENST00000431889 FAM166BA8MTA8 275 aa13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 HAX1O00165 279 aa13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 WWP2O00308 870 aa13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 PEX1O43933 1283 aa13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 SEC31AO94979 1220 aaKnown RBP13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 CLDN14O95500 239 aa13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 TBX6O95947 436 aaPredicted RBP13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 SERPINA6P08185 405 aa13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 SSTR1P30872 391 aa13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 RPL21P46778 160 aaKnown RBP13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 SKP1P63208 163 aa13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 OR4D1Q15615 310 aa13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.28□□□□□ -0.283e-7■■□□□ 12.7
SMARCE1-205ENST00000431889 CYP4Z2PQ8N1L4 340 aa13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 MARVELD2Q8N4S9 558 aa13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 SNX31Q8N9S9 440 aa13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 B3GNT7Q8NFL0 401 aa13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 RHBDF1Q96CC6 855 aa13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 PDLIM5Q96HC4 596 aaKnown RBP13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 KRT12Q99456 494 aa13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 DPH5Q9H2P9 285 aa13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 DEPPQ9NTK1 212 aa13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 CLDN16Q9Y5I7 305 aa13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 POLQO75417 2590 aa13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 LRIT2A6NDA9 550 aa13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 URADA6NGE7 173 aa13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 SAP18O00422 153 aaKnown RBP13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 RTCAO00442 366 aaKnown RBP13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 CES2O00748 559 aa13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 FCHO1O14526 889 aa13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 ZSCAN12O43309 604 aa13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 OR2J2O76002 312 aa13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 IFNA16P05015 189 aa13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 CLCN2P51788 898 aa13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 GNG11P61952 73 aa13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 IL20RBQ6UXL0 311 aa13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 TMIGD1Q6UXZ0 262 aa13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 RNF175Q8N4F7 328 aa13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 NKAPQ8N5F7 415 aaKnown RBP13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 VPS39Q96JC1 886 aa13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 F2RL3Q96RI0 385 aa13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 UCK2Q9BZX2 261 aa13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 RUBCNLQ9H714 662 aa13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 WWOXQ9NZC7 414 aa13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 ZNF490Q9ULM2 529 aaPredicted RBP13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 CORO1CQ9ULV4 474 aaPredicted RBP13.28□□□□□ -0.28
SMARCE1-205ENST00000431889 NKX2-6A6NCS4 301 aa13.27□□□□□ -0.29
SMARCE1-205ENST00000431889 TMEM200CA6NKL6 621 aa13.27□□□□□ -0.29
SMARCE1-205ENST00000431889 FAM90A27PA6NNH2 459 aa13.27□□□□□ -0.29
SMARCE1-205ENST00000431889 EFCAB8A8MWE9 144 aa13.27□□□□□ -0.29
SMARCE1-205ENST00000431889 PRRG2O14669 202 aa13.27□□□□□ -0.29
SMARCE1-205ENST00000431889 LDB3O75112 727 aa13.27□□□□□ -0.29
SMARCE1-205ENST00000431889 H2AFYO75367 372 aaKnown RBP13.27□□□□□ -0.29
SMARCE1-205ENST00000431889 FAM155BO75949 473 aa13.27□□□□□ -0.29
SMARCE1-205ENST00000431889 OR6B1O95007 311 aa13.27□□□□□ -0.29
SMARCE1-205ENST00000431889 MLYCDO95822 493 aa13.27□□□□□ -0.29
SMARCE1-205ENST00000431889 CCDC166P0CW27 439 aa13.27□□□□□ -0.29
SMARCE1-205ENST00000431889 TCP1P17987 556 aaKnown RBP13.27□□□□□ -0.29
SMARCE1-205ENST00000431889 GNAZP19086 355 aa13.27□□□□□ -0.29
SMARCE1-205ENST00000431889 CD22P20273 847 aa13.27□□□□□ -0.29
SMARCE1-205ENST00000431889 PTGS2P35354 604 aa13.27□□□□□ -0.29
SMARCE1-205ENST00000431889 SLC6A12P48065 614 aa13.27□□□□□ -0.29
SMARCE1-205ENST00000431889 STXBP1P61764 594 aaKnown RBP13.27□□□□□ -0.29
SMARCE1-205ENST00000431889 BMPR2Q13873 1038 aa13.27□□□□□ -0.29
SMARCE1-205ENST00000431889 TGFBIQ15582 683 aa13.27□□□□□ -0.29
SMARCE1-205ENST00000431889 ZNF750Q32MQ0 723 aa13.27□□□□□ -0.29
SMARCE1-205ENST00000431889 CMPK2Q5EBM0 449 aa13.27□□□□□ -0.29
SMARCE1-205ENST00000431889 SCUBE1Q8IWY4 988 aa13.27□□□□□ -0.29
SMARCE1-205ENST00000431889 ARMC2Q8NEN0 867 aa13.27□□□□□ -0.29
SMARCE1-205ENST00000431889 GAL3ST3Q96A11 431 aa13.27□□□□□ -0.29
SMARCE1-205ENST00000431889 QRFPRQ96P65 431 aa13.27□□□□□ -0.29
SMARCE1-205ENST00000431889 SORBS1Q9BX66 1292 aaKnown RBP13.27□□□□□ -0.29
SMARCE1-205ENST00000431889 REXO4Q9GZR2 422 aaKnown RBP13.27□□□□□ -0.29
SMARCE1-205ENST00000431889 MOCS1Q9NZB8 636 aa13.27□□□□□ -0.29
SMARCE1-205ENST00000431889 ERVK-11Q9UQG0 969 aa13.27□□□□□ -0.29
SMARCE1-205ENST00000431889 FANCGO15287 622 aa13.26□□□□□ -0.29
SMARCE1-205ENST00000431889 B3GALT2O43825 422 aa13.26□□□□□ -0.29
SMARCE1-205ENST00000431889 ZNF354AO60765 605 aaPredicted RBP13.26□□□□□ -0.29
SMARCE1-205ENST00000431889 TRHRP34981 398 aaPredicted RBP13.26□□□□□ -0.29
SMARCE1-205ENST00000431889 PTGER4P35408 488 aa13.26□□□□□ -0.29
SMARCE1-205ENST00000431889 SLC12A2P55011 1212 aa13.26□□□□□ -0.29
SMARCE1-205ENST00000431889 LIM2P55344 173 aa13.26□□□□□ -0.29
SMARCE1-205ENST00000431889 RAB38P57729 211 aa13.26□□□□□ -0.29
SMARCE1-205ENST00000431889 DOC2AQ14183 400 aa13.26□□□□□ -0.29
SMARCE1-205ENST00000431889 LGI4Q8N135 537 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms