RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 MAPKAP1Q9BPZ7 522 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 SLIRPQ9GZT3 109 aaKnown RBP8.35□□□□□ -1.07
GABPB1-205ENST00000429662 NXF2Q9GZY0 626 aaKnown RBP8.35□□□□□ -1.07
GABPB1-205ENST00000429662 DCSTAMPQ9H295 470 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 DSN1Q9H410 356 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 FAM83DQ9H4H8 585 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 TMEM38AQ9H6F2 299 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 BRD9Q9H8M2 597 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 ZNF556Q9HAH1 456 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 SGK2Q9HBY8 427 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 LTB4R2Q9NPC1 389 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 ANKMY1Q9P2S6 941 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 SPASTQ9UBP0 616 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 PCDHGA6Q9Y5G7 932 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 KLK4Q9Y5K2 254 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 PEX16Q9Y5Y5 336 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 MN1Q10571 1320 aaPredicted RBP8.35□□□□□ -1.07
GABPB1-205ENST00000429662 TMEM247A6NEH6 219 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 EFCAB10A6NFE3 127 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 METTL15A6NJ78 407 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 GABRR3A8MPY1 467 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 KDM1AO60341 852 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 WBP4O75554 376 aaKnown RBP8.35□□□□□ -1.07
GABPB1-205ENST00000429662 UPK1BO75841 260 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 ANXA4P09525 319 aaPredicted RBP8.35□□□□□ -1.07
GABPB1-205ENST00000429662 CYP4B1P13584 511 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 IDSP22304 550 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 NR4A1P22736 598 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 RRM2P31350 389 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 TIA1P31483 386 aaKnown RBP eCLIP8.35□□□□□ -1.071e-7■□□□□ 8.2
GABPB1-205ENST00000429662 S100A5P33763 92 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 TGFBR2P37173 567 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 PIK3CBP42338 1070 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 RECQLP46063 649 aaPredicted RBP8.35□□□□□ -1.07
GABPB1-205ENST00000429662 EIF2B2P49770 351 aaKnown RBP8.35□□□□□ -1.07
GABPB1-205ENST00000429662 DOC2AQ14183 400 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 MICAQ29983 383 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 ZNF630Q2M218 657 aaPredicted RBP8.35□□□□□ -1.07
GABPB1-205ENST00000429662 SYTL3Q4VX76 610 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 GCNT6Q5T4J0 391 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 HIST2H2AA3Q6FI13 130 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 PDE12Q6L8Q7 609 aaKnown RBP8.35□□□□□ -1.07
GABPB1-205ENST00000429662 MED27Q6P2C8 311 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 PNCKQ6P2M8 343 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 AGTRAPQ6RW13 159 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 GDPD4Q6W3E5 623 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 AHSA2Q719I0 299 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 ZNF367Q7RTV3 350 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 SLC46A3Q7Z3Q1 461 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 DDX53Q86TM3 631 aaKnown RBP8.35□□□□□ -1.07
GABPB1-205ENST00000429662 MAML2Q8IZL2 1156 aaPredicted RBP8.35□□□□□ -1.07
GABPB1-205ENST00000429662 SLC39A11Q8N1S5 342 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 DNAJC22Q8N4W6 341 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 OXR1Q8N573 874 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 SCAIQ8N9R8 606 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 GALNT6Q8NCL4 622 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 TTC16Q8NEE8 873 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 OR10G2Q8NGC3 310 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 OR52N2Q8NGI0 321 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 CHAC2Q8WUX2 184 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 POF1BQ8WVV4 589 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 UBE2E3Q969T4 207 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 TMEM159Q96B96 161 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 WDR34Q96EX3 536 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 TPD52L3Q96J77 140 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 EGLN2Q96KS0 407 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 VPS35Q96QK1 796 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 BARD1Q99728 777 aaKnown RBP8.35□□□□□ -1.07
GABPB1-205ENST00000429662 ZSCAN5AQ9BUG6 496 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 EFCAB11Q9BUY7 163 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 VN1R3Q9BXE9 311 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 REEP4Q9H6H4 257 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 SIAEQ9HAT2 523 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 EXD2Q9NVH0 621 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 CNOT2Q9NZN8 540 aaKnown RBP8.35□□□□□ -1.07
GABPB1-205ENST00000429662 CFAP97Q9P2B7 532 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 B4GALT6Q9UBX8 382 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 MKLN1Q9UL63 735 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 DOLKQ9UPQ8 538 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 RNF6Q9Y252 685 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 WBP11Q9Y2W2 641 aaKnown RBP8.35□□□□□ -1.07
GABPB1-205ENST00000429662 TSC22D4Q9Y3Q8 395 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 RWDD3Q9Y3V2 267 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 KCNE2Q9Y6J6 123 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 TSPAN11A1L157 253 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 AGAP5A6NIR3 686 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 LOC110117498-PIK3R3F6TDL0 507 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 CACNB4O00305 520 aaPredicted RBP8.34□□□□□ -1.07
GABPB1-205ENST00000429662 AQP9O43315 295 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 PCDHGA12O60330 932 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 ADAM23O75077 832 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 ATG13O75143 517 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 RFPL2O75678 378 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 MED26O95402 600 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 PTTG1O95997 202 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 CKMP06732 381 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 LAMP1P11279 417 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 LAG3P18627 525 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 LHCGRP22888 699 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 ITPKAP23677 461 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms