RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 MAP4K5Q9Y4K4 846 aa13.08□□□□□ -0.32
THBS3-202ENST00000428962 A8MVJ9 347 aa13.07□□□□□ -0.32
THBS3-202ENST00000428962 PLPP1O14494 284 aa13.07□□□□□ -0.32
THBS3-202ENST00000428962 PDPK1O15530 556 aa13.07□□□□□ -0.32
THBS3-202ENST00000428962 ANXA8P13928 327 aa13.07□□□□□ -0.32
THBS3-202ENST00000428962 DSTNP60981 165 aa13.07□□□□□ -0.32
THBS3-202ENST00000428962 SPIBQ01892 262 aa13.07□□□□□ -0.32
THBS3-202ENST00000428962 EEF1A2Q05639 463 aaKnown RBP13.07□□□□□ -0.32
THBS3-202ENST00000428962 DMPKQ09013 629 aa13.07□□□□□ -0.32
THBS3-202ENST00000428962 SLC5A12Q1EHB4 618 aa13.07□□□□□ -0.32
THBS3-202ENST00000428962 IER5LQ5T953 404 aa13.07□□□□□ -0.32
THBS3-202ENST00000428962 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.07□□□□□ -0.32
THBS3-202ENST00000428962 NUDT13Q86X67 352 aa13.07□□□□□ -0.32
THBS3-202ENST00000428962 ARMC8Q8IUR7 673 aa13.07□□□□□ -0.32
THBS3-202ENST00000428962 C2orf73Q8N5S3 287 aaPredicted RBP13.07□□□□□ -0.32
THBS3-202ENST00000428962 OR5P2Q8WZ92 322 aa13.07□□□□□ -0.32
THBS3-202ENST00000428962 RORBQ92753 470 aa13.07□□□□□ -0.32
THBS3-202ENST00000428962 TAMM41Q96BW9 452 aa13.07□□□□□ -0.32
THBS3-202ENST00000428962 ZNF764Q96H86 408 aaPredicted RBP13.07□□□□□ -0.32
THBS3-202ENST00000428962 RAB11FIP5Q9BXF6 653 aa13.07□□□□□ -0.32
THBS3-202ENST00000428962 SLC6A16Q9GZN6 736 aa13.07□□□□□ -0.32
THBS3-202ENST00000428962 DUSP21Q9H596 190 aa13.07□□□□□ -0.32
THBS3-202ENST00000428962 OCEL1Q9H607 264 aa13.07□□□□□ -0.32
THBS3-202ENST00000428962 TAAR2Q9P1P5 351 aa13.07□□□□□ -0.32
THBS3-202ENST00000428962 ENPP5Q9UJA9 477 aa13.07□□□□□ -0.32
THBS3-202ENST00000428962 HEMK1Q9Y5R4 338 aaPredicted RBP13.07□□□□□ -0.32
THBS3-202ENST00000428962 LYVE1Q9Y5Y7 322 aa13.07□□□□□ -0.32
THBS3-202ENST00000428962 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.06□□□□□ -0.32
THBS3-202ENST00000428962 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.06□□□□□ -0.32
THBS3-202ENST00000428962 TMEM229AB2RXF0 380 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 XPNPEP2O43895 674 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 FAM20BO75063 409 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 NDUFS2O75306 463 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 OPN1SWP03999 348 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 FMO3P31513 532 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 CLCNKAP51800 687 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 TAS2R38P59533 333 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 RPP38P78345 283 aaKnown RBP13.06□□□□□ -0.32
THBS3-202ENST00000428962 SLC35A2P78381 396 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 PIGFQ07326 219 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 FAM109BQ6ICB4 259 aaPredicted RBP13.06□□□□□ -0.32
THBS3-202ENST00000428962 ANKRD13BQ86YJ7 626 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 DEFB123Q8N688 67 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 OR10G2Q8NGC3 310 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 OR5AK3PQ8NH89 298 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 HRASLS5Q96KN8 279 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 ZNF300Q96RE9 604 aaPredicted RBP13.06□□□□□ -0.32
THBS3-202ENST00000428962 FUNDC2Q9BWH2 189 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 LGR4Q9BXB1 951 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 ENOPH1Q9UHY7 261 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 ADAM29Q9UKF5 820 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 POFUT2Q9Y2G5 429 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 TESMINQ9Y4I5 508 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 NUP214P35658 2090 aaPredicted RBP13.06□□□□□ -0.32
THBS3-202ENST00000428962 GRXCR1A8MXD5 290 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 RGS10O43665 173 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 STT3AP46977 705 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 PXNP49023 591 aaPredicted RBP13.06□□□□□ -0.32
THBS3-202ENST00000428962 EMP3P54852 163 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 PCBP3P57721 371 aaKnown RBP13.06□□□□□ -0.32
THBS3-202ENST00000428962 CYP4F2P78329 520 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 EMX1Q04741 257 aaPredicted RBP13.06□□□□□ -0.32
THBS3-202ENST00000428962 ENPP2Q13822 863 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 IRF4Q15306 451 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 FAM124AQ86V42 546 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 HDDC3Q8N4P3 179 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 ZNF540Q8NDQ6 660 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 TTLQ8NG68 377 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 TBC1D15Q8TC07 691 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 FAR1Q8WVX9 515 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 BORCS5Q969J3 196 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 RGMAQ96B86 450 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 ERLEC1Q96DZ1 483 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 NEURL3Q96EH8 262 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 TIMM29Q9BSF4 260 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 MENTQ9BUN1 341 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 EPS8L2Q9H6S3 715 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 RMI1Q9H9A7 625 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 ZDHHC4Q9NPG8 344 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 TM7SF3Q9NS93 570 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 CUEDC1Q9NWM3 386 aaPredicted RBP13.06□□□□□ -0.32
THBS3-202ENST00000428962 ERVK-18Q9QC07 812 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 HCN2Q9UL51 889 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 FAM32AQ9Y421 112 aaKnown RBP13.06□□□□□ -0.32
THBS3-202ENST00000428962 SNX8Q9Y5X2 465 aa13.06□□□□□ -0.32
THBS3-202ENST00000428962 CFAP20Q9Y6A4 193 aaKnown RBP13.06□□□□□ -0.32
THBS3-202ENST00000428962 C5orf58C9J3I9 102 aa13.05□□□□□ -0.32
THBS3-202ENST00000428962 E9PQ18 207 aa13.05□□□□□ -0.32
THBS3-202ENST00000428962 NDUFS4O43181 175 aa13.05□□□□□ -0.32
THBS3-202ENST00000428962 KCNJ13O60928 360 aa13.05□□□□□ -0.32
THBS3-202ENST00000428962 BSGP35613 385 aa13.05□□□□□ -0.32
THBS3-202ENST00000428962 TRIM23P36406 574 aa13.05□□□□□ -0.32
THBS3-202ENST00000428962 ENTPD1P49961 510 aa13.05□□□□□ -0.32
THBS3-202ENST00000428962 MAPK10P53779 464 aa13.05□□□□□ -0.32
THBS3-202ENST00000428962 CASP9P55211 416 aa13.05□□□□□ -0.32
THBS3-202ENST00000428962 GP2P55259 537 aaKnown RBP13.05□□□□□ -0.32
THBS3-202ENST00000428962 TRA2BP62995 288 aaKnown RBP13.05□□□□□ -0.32
THBS3-202ENST00000428962 NPTX1Q15818 432 aa13.05□□□□□ -0.32
THBS3-202ENST00000428962 SAXO2Q658L1 398 aa13.05□□□□□ -0.32
THBS3-202ENST00000428962 ZNF776Q68DI1 518 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms