RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 PRKNO60260 465 aaPredicted RBP17.02■□□□□ 0.32
UPK3BP1-201ENST00000428678 OR2J2O76002 312 aa17.02■□□□□ 0.32
UPK3BP1-201ENST00000428678 ZFAND5O76080 213 aa17.02■□□□□ 0.32
UPK3BP1-201ENST00000428678 KLK2P20151 261 aa17.02■□□□□ 0.32
UPK3BP1-201ENST00000428678 CXCR5P32302 372 aa17.02■□□□□ 0.32
UPK3BP1-201ENST00000428678 IL2P60568 153 aa17.02■□□□□ 0.32
UPK3BP1-201ENST00000428678 IL20RBQ6UXL0 311 aa17.02■□□□□ 0.32
UPK3BP1-201ENST00000428678 B3GNT6Q6ZMB0 384 aa17.02■□□□□ 0.32
UPK3BP1-201ENST00000428678 TMPRSS11BQ86T26 416 aa17.02■□□□□ 0.32
UPK3BP1-201ENST00000428678 SLC22A16Q86VW1 577 aa17.02■□□□□ 0.32
UPK3BP1-201ENST00000428678 SPC24Q8NBT2 197 aa17.02■□□□□ 0.32
UPK3BP1-201ENST00000428678 C2CD4AQ8NCU7 369 aaPredicted RBP17.02■□□□□ 0.32
UPK3BP1-201ENST00000428678 MYRIPQ8NFW9 859 aa17.02■□□□□ 0.32
UPK3BP1-201ENST00000428678 SREK1Q8WXA9 508 aaKnown RBP17.02■□□□□ 0.32
UPK3BP1-201ENST00000428678 SMC6Q96SB8 1091 aa17.02■□□□□ 0.32
UPK3BP1-201ENST00000428678 AIF1LQ9BQI0 150 aa17.02■□□□□ 0.32
UPK3BP1-201ENST00000428678 RBSNQ9H1K0 784 aa17.02■□□□□ 0.32
UPK3BP1-201ENST00000428678 CXXC4Q9H2H0 198 aa17.02■□□□□ 0.32
UPK3BP1-201ENST00000428678 ZDHHC11Q9H8X9 412 aa17.02■□□□□ 0.32
UPK3BP1-201ENST00000428678 EML6Q6ZMW3 1958 aa17.02■□□□□ 0.31
UPK3BP1-201ENST00000428678 BCKDKO14874 412 aa17.01■□□□□ 0.31
UPK3BP1-201ENST00000428678 OR6B1O95007 311 aa17.01■□□□□ 0.31
UPK3BP1-201ENST00000428678 SMIM10L1P0DMW3 83 aa17.01■□□□□ 0.31
UPK3BP1-201ENST00000428678 SAT1P21673 171 aa17.01■□□□□ 0.31
UPK3BP1-201ENST00000428678 MAGEA3P43357 314 aa17.01■□□□□ 0.31
UPK3BP1-201ENST00000428678 ZFP36L2P47974 494 aaKnown RBP17.01■□□□□ 0.31
UPK3BP1-201ENST00000428678 BTN3A2P78410 334 aa17.01■□□□□ 0.31
UPK3BP1-201ENST00000428678 PDAP1Q13442 181 aaKnown RBP17.01■□□□□ 0.31
UPK3BP1-201ENST00000428678 TTC27Q6P3X3 843 aa17.01■□□□□ 0.31
UPK3BP1-201ENST00000428678 RGS9BPQ6ZS82 235 aa17.01■□□□□ 0.31
UPK3BP1-201ENST00000428678 SCUBE1Q8IWY4 988 aa17.01■□□□□ 0.31
UPK3BP1-201ENST00000428678 GPALPP1Q8IXQ4 340 aa17.01■□□□□ 0.31
UPK3BP1-201ENST00000428678 ZZZ3Q8IYH5 903 aa17.01■□□□□ 0.31
UPK3BP1-201ENST00000428678 GABPB2Q8TAK5 448 aaPredicted RBP17.01■□□□□ 0.31
UPK3BP1-201ENST00000428678 NINJ1Q92982 152 aa17.01■□□□□ 0.31
UPK3BP1-201ENST00000428678 SMIM10Q96HG1 83 aa17.01■□□□□ 0.31
UPK3BP1-201ENST00000428678 FAR2Q96K12 515 aa17.01■□□□□ 0.31
UPK3BP1-201ENST00000428678 SIGLEC10Q96LC7 697 aa17.01■□□□□ 0.31
UPK3BP1-201ENST00000428678 TTYH2Q9BSA4 534 aa17.01■□□□□ 0.31
UPK3BP1-201ENST00000428678 POLDIP3Q9BY77 421 aaKnown RBP17.01■□□□□ 0.31
UPK3BP1-201ENST00000428678 TTTY12Q9BZ98 90 aa17.01■□□□□ 0.31
UPK3BP1-201ENST00000428678 PELI2Q9HAT8 420 aa17.01■□□□□ 0.31
UPK3BP1-201ENST00000428678 PRTFDC1Q9NRG1 225 aa17.01■□□□□ 0.31
UPK3BP1-201ENST00000428678 PPIEQ9UNP9 301 aaKnown RBP17.01■□□□□ 0.31
UPK3BP1-201ENST00000428678 L3MBTL1Q9Y468 752 aa17.01■□□□□ 0.31
UPK3BP1-201ENST00000428678 LIPGQ9Y5X9 500 aa17.01■□□□□ 0.31
UPK3BP1-201ENST00000428678 A0A0G2JN53 185 aa17■□□□□ 0.31
UPK3BP1-201ENST00000428678 OR14I1A6ND48 311 aa17■□□□□ 0.31
UPK3BP1-201ENST00000428678 TGFBR3LH3BV60 316 aa17■□□□□ 0.31
UPK3BP1-201ENST00000428678 SERPINA6P08185 405 aa17■□□□□ 0.31
UPK3BP1-201ENST00000428678 GLI4P10075 376 aa17■□□□□ 0.31
UPK3BP1-201ENST00000428678 GABRB3P28472 473 aa17■□□□□ 0.31
UPK3BP1-201ENST00000428678 SOX3P41225 446 aa17■□□□□ 0.31
UPK3BP1-201ENST00000428678 PGGT1BP53609 377 aa17■□□□□ 0.31
UPK3BP1-201ENST00000428678 DLX5P56178 289 aa17■□□□□ 0.31
UPK3BP1-201ENST00000428678 SLC13A2Q13183 592 aa17■□□□□ 0.31
UPK3BP1-201ENST00000428678 CRYMQ14894 314 aa17■□□□□ 0.31
UPK3BP1-201ENST00000428678 CEBPEQ15744 281 aa17■□□□□ 0.31
UPK3BP1-201ENST00000428678 XKR6Q5GH73 641 aa17■□□□□ 0.31
UPK3BP1-201ENST00000428678 NXPE4Q6UWF7 544 aa17■□□□□ 0.31
UPK3BP1-201ENST00000428678 GK5Q6ZS86 529 aa17■□□□□ 0.31
UPK3BP1-201ENST00000428678 MMP21Q8N119 569 aa17■□□□□ 0.31
UPK3BP1-201ENST00000428678 AICDAQ9GZX7 198 aa17■□□□□ 0.31
UPK3BP1-201ENST00000428678 LZTFL1Q9NQ48 299 aa17■□□□□ 0.31
UPK3BP1-201ENST00000428678 ST6GALNAC2Q9UJ37 374 aa17■□□□□ 0.31
UPK3BP1-201ENST00000428678 FAM215AQ9Y5M1 114 aa17■□□□□ 0.31
UPK3BP1-201ENST00000428678 VPS13CQ709C8 3753 aa16.99■□□□□ 0.31
UPK3BP1-201ENST00000428678 A0A0G2JNJ9 132 aa16.99■□□□□ 0.31
UPK3BP1-201ENST00000428678 WWP2O00308 870 aa16.99■□□□□ 0.31
UPK3BP1-201ENST00000428678 CLDN4O14493 209 aa16.99■□□□□ 0.31
UPK3BP1-201ENST00000428678 CTAG2O75638 210 aa16.99■□□□□ 0.31
UPK3BP1-201ENST00000428678 GPR143P51810 404 aa16.99■□□□□ 0.31
UPK3BP1-201ENST00000428678 HNRNPFP52597 415 aaKnown RBP16.99■□□□□ 0.31
UPK3BP1-201ENST00000428678 HSD17B7P56937 341 aa16.99■□□□□ 0.31
UPK3BP1-201ENST00000428678 STXBP1P61764 594 aaKnown RBP16.99■□□□□ 0.31
UPK3BP1-201ENST00000428678 BMPR2Q13873 1038 aa16.99■□□□□ 0.31
UPK3BP1-201ENST00000428678 RUNX2Q13950 521 aa16.99■□□□□ 0.31
UPK3BP1-201ENST00000428678 NDUFAF5Q5TEU4 345 aa16.99■□□□□ 0.31
UPK3BP1-201ENST00000428678 THOC6Q86W42 341 aaKnown RBP16.99■□□□□ 0.31
UPK3BP1-201ENST00000428678 FAM47BQ8NA70 645 aa16.99■□□□□ 0.31
UPK3BP1-201ENST00000428678 MAGOHBQ96A72 148 aaKnown RBP16.99■□□□□ 0.31
UPK3BP1-201ENST00000428678 PWWP2AQ96N64 755 aa16.99■□□□□ 0.31
UPK3BP1-201ENST00000428678 RASL10BQ96S79 203 aa16.99■□□□□ 0.31
UPK3BP1-201ENST00000428678 FAM173AQ9BQD7 235 aa16.99■□□□□ 0.31
UPK3BP1-201ENST00000428678 LIME1Q9H400 295 aa16.99■□□□□ 0.31
UPK3BP1-201ENST00000428678 ADAP2Q9NPF8 381 aa16.99■□□□□ 0.31
UPK3BP1-201ENST00000428678 MYOTQ9UBF9 498 aa16.99■□□□□ 0.31
UPK3BP1-201ENST00000428678 Q9UFV3 132 aa16.99■□□□□ 0.31
UPK3BP1-201ENST00000428678 ACAD8Q9UKU7 415 aa16.99■□□□□ 0.31
UPK3BP1-201ENST00000428678 TMEM200CA6NKL6 621 aa16.98■□□□□ 0.31
UPK3BP1-201ENST00000428678 GLSO94925 669 aaPredicted RBP16.98■□□□□ 0.31
UPK3BP1-201ENST00000428678 IGHG3P01860 377 aa16.98■□□□□ 0.31
UPK3BP1-201ENST00000428678 AHSGP02765 367 aa16.98■□□□□ 0.31
UPK3BP1-201ENST00000428678 IFNA16P05015 189 aa16.98■□□□□ 0.31
UPK3BP1-201ENST00000428678 ENO2P09104 434 aaPredicted RBP16.98■□□□□ 0.31
UPK3BP1-201ENST00000428678 PGAM1P18669 254 aa16.98■□□□□ 0.31
UPK3BP1-201ENST00000428678 MAGEA5P43359 124 aa16.98■□□□□ 0.31
UPK3BP1-201ENST00000428678 CCZ1BP86790 482 aa16.98■□□□□ 0.31
UPK3BP1-201ENST00000428678 CCZ1P86791 482 aaPredicted RBP16.98■□□□□ 0.31
UPK3BP1-201ENST00000428678 ZNF750Q32MQ0 723 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms