RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 GPR143P51810 404 aa15.4■□□□□ 0.06
VARS-216ENST00000428445 NUP107P57740 925 aa15.4■□□□□ 0.06
VARS-216ENST00000428445 TFF3Q07654 80 aa15.4■□□□□ 0.06
VARS-216ENST00000428445 PPP1R7Q15435 360 aa15.4■□□□□ 0.06
VARS-216ENST00000428445 PPP1R3AQ16821 1122 aa15.4■□□□□ 0.06
VARS-216ENST00000428445 IL20RBQ6UXL0 311 aa15.4■□□□□ 0.06
VARS-216ENST00000428445 ZNF321PQ8N8H1 164 aa15.4■□□□□ 0.06
VARS-216ENST00000428445 FAM47BQ8NA70 645 aa15.4■□□□□ 0.06
VARS-216ENST00000428445 ZFP62Q8NB50 900 aaPredicted RBP15.4■□□□□ 0.06
VARS-216ENST00000428445 POGLUT1Q8NBL1 392 aa15.4■□□□□ 0.06
VARS-216ENST00000428445 TRPV3Q8NET8 790 aa15.4■□□□□ 0.06
VARS-216ENST00000428445 OR5M9Q8NGP3 310 aa15.4■□□□□ 0.06
VARS-216ENST00000428445 LILRB4Q8NHJ6 448 aa15.4■□□□□ 0.06
VARS-216ENST00000428445 CCT6BQ92526 530 aa15.4■□□□□ 0.06
VARS-216ENST00000428445 PELI2Q9HAT8 420 aa15.4■□□□□ 0.06
VARS-216ENST00000428445 PRTFDC1Q9NRG1 225 aa15.4■□□□□ 0.06
VARS-216ENST00000428445 GOLGA6L10A0A0M3HER8 536 aa15.39■□□□□ 0.05
VARS-216ENST00000428445 URADA6NGE7 173 aa15.39■□□□□ 0.05
VARS-216ENST00000428445 NPIPA2E9PIF3 369 aa15.39■□□□□ 0.05
VARS-216ENST00000428445 NPIPA3F8WFD2 350 aa15.39■□□□□ 0.05
VARS-216ENST00000428445 WWP2O00308 870 aa15.39■□□□□ 0.05
VARS-216ENST00000428445 DNALI1O14645 258 aaPredicted RBP15.39■□□□□ 0.05
VARS-216ENST00000428445 OR2J2O76002 312 aa15.39■□□□□ 0.05
VARS-216ENST00000428445 OR6B1O95007 311 aa15.39■□□□□ 0.05
VARS-216ENST00000428445 SERPINA6P08185 405 aa15.39■□□□□ 0.05
VARS-216ENST00000428445 ENO2P09104 434 aaPredicted RBP15.39■□□□□ 0.05
VARS-216ENST00000428445 IGFBP2P18065 325 aa15.39■□□□□ 0.05
VARS-216ENST00000428445 ELK3P41970 407 aa15.39■□□□□ 0.05
VARS-216ENST00000428445 PPIAP62937 165 aaKnown RBP15.39■□□□□ 0.05
VARS-216ENST00000428445 ZNF750Q32MQ0 723 aa15.39■□□□□ 0.05
VARS-216ENST00000428445 FBXO48Q5FWF7 155 aa15.39■□□□□ 0.05
VARS-216ENST00000428445 ADNP2Q6IQ32 1131 aa15.39■□□□□ 0.05
VARS-216ENST00000428445 SPNS3Q6ZMD2 512 aa15.39■□□□□ 0.05
VARS-216ENST00000428445 SCUBE1Q8IWY4 988 aa15.39■□□□□ 0.05
VARS-216ENST00000428445 ARMC2Q8NEN0 867 aa15.39■□□□□ 0.05
VARS-216ENST00000428445 PDLIM5Q96HC4 596 aaKnown RBP15.39■□□□□ 0.05
VARS-216ENST00000428445 CSF3RQ99062 836 aa15.39■□□□□ 0.05
VARS-216ENST00000428445 PNPLA3Q9NST1 481 aa15.39■□□□□ 0.05
VARS-216ENST00000428445 ASIC3Q9UHC3 531 aa15.39■□□□□ 0.05
VARS-216ENST00000428445 ERVK-11Q9UQG0 969 aa15.39■□□□□ 0.05
VARS-216ENST00000428445 CHMP2BQ9UQN3 213 aa15.39■□□□□ 0.05
VARS-216ENST00000428445 LIPGQ9Y5X9 500 aa15.39■□□□□ 0.05
VARS-216ENST00000428445 PSAT1Q9Y617 370 aa15.39■□□□□ 0.05
VARS-216ENST00000428445 USP27XA6NNY8 438 aa15.38■□□□□ 0.05
VARS-216ENST00000428445 ERI3O43414 337 aaKnown RBP15.38■□□□□ 0.05
VARS-216ENST00000428445 WDR47O94967 919 aa15.38■□□□□ 0.05
VARS-216ENST00000428445 TBX6O95947 436 aaPredicted RBP15.38■□□□□ 0.05
VARS-216ENST00000428445 SSR4P51571 173 aa15.38■□□□□ 0.05
VARS-216ENST00000428445 PLA2G16P53816 162 aa15.38■□□□□ 0.05
VARS-216ENST00000428445 SLC13A2Q13183 592 aa15.38■□□□□ 0.05
VARS-216ENST00000428445 SNTB1Q13884 538 aaKnown RBP15.38■□□□□ 0.05
VARS-216ENST00000428445 GXYLT1Q4G148 440 aa15.38■□□□□ 0.05
VARS-216ENST00000428445 TMEM211Q6ICI0 200 aa15.38■□□□□ 0.05
VARS-216ENST00000428445 FAM45BPQ6NSW5 357 aa15.38■□□□□ 0.05
VARS-216ENST00000428445 PSD4Q8NDX1 1056 aa15.38■□□□□ 0.05
VARS-216ENST00000428445 FAM45AQ8TCE6 357 aa15.38■□□□□ 0.05
VARS-216ENST00000428445 ANKRD49Q8WVL7 239 aa15.38■□□□□ 0.05
VARS-216ENST00000428445 ANKRD7Q92527 254 aa15.38■□□□□ 0.05
VARS-216ENST00000428445 RND1Q92730 232 aa15.38■□□□□ 0.05
VARS-216ENST00000428445 MS4A6EQ96DS6 147 aa15.38■□□□□ 0.05
VARS-216ENST00000428445 VMP1Q96GC9 406 aa15.38■□□□□ 0.05
VARS-216ENST00000428445 SEC16BQ96JE7 1060 aa15.38■□□□□ 0.05
VARS-216ENST00000428445 EGFL8Q99944 293 aa15.38■□□□□ 0.05
VARS-216ENST00000428445 DDX47Q9H0S4 455 aaKnown RBP15.38■□□□□ 0.05
VARS-216ENST00000428445 PLSCR2Q9NRY7 297 aa15.38■□□□□ 0.05
VARS-216ENST00000428445 MMACHCQ9Y4U1 282 aa15.38■□□□□ 0.05
VARS-216ENST00000428445 KCNE2Q9Y6J6 123 aa15.38■□□□□ 0.05
VARS-216ENST00000428445 LRIT2A6NDA9 550 aa15.37■□□□□ 0.05
VARS-216ENST00000428445 NCF1BA6NI72 391 aaPredicted RBP15.37■□□□□ 0.05
VARS-216ENST00000428445 A8MVJ9 347 aa15.37■□□□□ 0.05
VARS-216ENST00000428445 NCF1CA8MVU1 366 aaPredicted RBP15.37■□□□□ 0.05
VARS-216ENST00000428445 ZNF354AO60765 605 aaPredicted RBP15.37■□□□□ 0.05
VARS-216ENST00000428445 PRAMEF4O60810 478 aa15.37■□□□□ 0.05
VARS-216ENST00000428445 PIAS1O75925 651 aa15.37■□□□□ 0.05
VARS-216ENST00000428445 C1GALT1C1LP0DN25 315 aa15.37■□□□□ 0.05
VARS-216ENST00000428445 NCF1P14598 390 aaPredicted RBP15.37■□□□□ 0.05
VARS-216ENST00000428445 IVDP26440 423 aa15.37■□□□□ 0.05
VARS-216ENST00000428445 CHRNB4P30926 498 aa15.37■□□□□ 0.05
VARS-216ENST00000428445 SOX3P41225 446 aa15.37■□□□□ 0.05
VARS-216ENST00000428445 PLGLB1Q02325 96 aa15.37■□□□□ 0.05
VARS-216ENST00000428445 ILF2Q12905 390 aaKnown RBP15.37■□□□□ 0.05
VARS-216ENST00000428445 BMPR2Q13873 1038 aa15.37■□□□□ 0.05
VARS-216ENST00000428445 SLBPQ14493 270 aaKnown RBP eCLIP15.37■□□□□ 0.05
VARS-216ENST00000428445 PRAMEF9Q5VWM5 478 aa15.37■□□□□ 0.05
VARS-216ENST00000428445 ARHGAP11AQ6P4F7 1023 aa15.37■□□□□ 0.05
VARS-216ENST00000428445 SLCO4C1Q6ZQN7 724 aa15.37■□□□□ 0.05
VARS-216ENST00000428445 VN1R5Q7Z5H4 357 aa15.37■□□□□ 0.05
VARS-216ENST00000428445 ANKMY2Q8IV38 441 aa15.37■□□□□ 0.05
VARS-216ENST00000428445 KLHDC8AQ8IYD2 350 aa15.37■□□□□ 0.05
VARS-216ENST00000428445 EID3Q8N140 333 aa15.37■□□□□ 0.05
VARS-216ENST00000428445 SPATA6LQ8N4H0 392 aa15.37■□□□□ 0.05
VARS-216ENST00000428445 OR2M7Q8NG81 312 aa15.37■□□□□ 0.05
VARS-216ENST00000428445 SLCO2A1Q92959 643 aa15.37■□□□□ 0.05
VARS-216ENST00000428445 ESAMQ96AP7 390 aa15.37■□□□□ 0.05
VARS-216ENST00000428445 LRRC39Q96DD0 335 aa15.37■□□□□ 0.05
VARS-216ENST00000428445 FAR2Q96K12 515 aa15.37■□□□□ 0.05
VARS-216ENST00000428445 QRFPRQ96P65 431 aa15.37■□□□□ 0.05
VARS-216ENST00000428445 OSBPL9Q96SU4 736 aa15.37■□□□□ 0.05
VARS-216ENST00000428445 TP63Q9H3D4 680 aaPredicted RBP15.37■□□□□ 0.05
VARS-216ENST00000428445 KCNJ16Q9NPI9 418 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms