RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 RBCK1Q9BYM8 510 aa15.45■□□□□ 0.06
C9orf3-206ENST00000428313 LRTM1Q9HBL6 345 aa15.45■□□□□ 0.06
C9orf3-206ENST00000428313 CD93Q9NPY3 652 aa15.45■□□□□ 0.06
C9orf3-206ENST00000428313 TMEM184CQ9NVA4 438 aa15.45■□□□□ 0.06
C9orf3-206ENST00000428313 FAM50BQ9Y247 325 aa15.45■□□□□ 0.06
C9orf3-206ENST00000428313 ALPK3Q96L96 1907 aa15.44■□□□□ 0.06
C9orf3-206ENST00000428313 MEIKINA0A087WXM9 373 aa15.44■□□□□ 0.06
C9orf3-206ENST00000428313 M0R129 80 aa15.44■□□□□ 0.06
C9orf3-206ENST00000428313 BEST1O76090 585 aa15.44■□□□□ 0.06
C9orf3-206ENST00000428313 S100A6P06703 90 aa15.44■□□□□ 0.06
C9orf3-206ENST00000428313 HBQ1P09105 142 aa15.44■□□□□ 0.06
C9orf3-206ENST00000428313 CDKN2CP42773 168 aa15.44■□□□□ 0.06
C9orf3-206ENST00000428313 CLDN8P56748 225 aa15.44■□□□□ 0.06
C9orf3-206ENST00000428313 GTF2H2Q13888 395 aa15.44■□□□□ 0.06
C9orf3-206ENST00000428313 GPR176Q14439 515 aa15.44■□□□□ 0.06
C9orf3-206ENST00000428313 GPR68Q15743 365 aa15.44■□□□□ 0.06
C9orf3-206ENST00000428313 C3orf38Q5JPI3 329 aa15.44■□□□□ 0.06
C9orf3-206ENST00000428313 SIRPB2Q5JXA9 342 aa15.44■□□□□ 0.06
C9orf3-206ENST00000428313 MPP7Q5T2T1 576 aa15.44■□□□□ 0.06
C9orf3-206ENST00000428313 BCL2L15Q5TBC7 163 aa15.44■□□□□ 0.06
C9orf3-206ENST00000428313 ZNF57Q68EA5 555 aaPredicted RBP15.44■□□□□ 0.06
C9orf3-206ENST00000428313 GTF2H2CQ6P1K8 395 aa15.44■□□□□ 0.06
C9orf3-206ENST00000428313 KIAA0907Q7Z7F0 614 aaPredicted RBP15.44■□□□□ 0.06
C9orf3-206ENST00000428313 PTOV1Q86YD1 416 aa15.44■□□□□ 0.06
C9orf3-206ENST00000428313 UXS1Q8NBZ7 420 aa15.44■□□□□ 0.06
C9orf3-206ENST00000428313 OR4L1Q8NH43 312 aa15.44■□□□□ 0.06
C9orf3-206ENST00000428313 ZBED3Q96IU2 234 aaPredicted RBP15.44■□□□□ 0.06
C9orf3-206ENST00000428313 GPR21Q99679 349 aa15.44■□□□□ 0.06
C9orf3-206ENST00000428313 NIPSNAP1Q9BPW8 284 aa15.44■□□□□ 0.06
C9orf3-206ENST00000428313 OR51J1Q9H342 316 aa15.44■□□□□ 0.06
C9orf3-206ENST00000428313 COA4Q9NYJ1 87 aa15.44■□□□□ 0.06
C9orf3-206ENST00000428313 ERAP1Q9NZ08 941 aa15.44■□□□□ 0.06
C9orf3-206ENST00000428313 SCP2D1Q9UJQ7 156 aa15.44■□□□□ 0.06
C9orf3-206ENST00000428313 GTPBP1O00178 669 aaKnown RBP15.43■□□□□ 0.06
C9orf3-206ENST00000428313 WWP2O00308 870 aa15.43■□□□□ 0.06
C9orf3-206ENST00000428313 NUPL2O15504 423 aaKnown RBP15.43■□□□□ 0.06
C9orf3-206ENST00000428313 PSIP1O75475 530 aaKnown RBP15.43■□□□□ 0.06
C9orf3-206ENST00000428313 IGHA2P01877 340 aa15.43■□□□□ 0.06
C9orf3-206ENST00000428313 CPEP16870 476 aa15.43■□□□□ 0.06
C9orf3-206ENST00000428313 GPX2P18283 190 aa15.43■□□□□ 0.06
C9orf3-206ENST00000428313 ACLYP53396 1101 aa15.43■□□□□ 0.06
C9orf3-206ENST00000428313 LTB4RQ15722 352 aa15.43■□□□□ 0.06
C9orf3-206ENST00000428313 GPR33Q49SQ1 333 aa15.43■□□□□ 0.06
C9orf3-206ENST00000428313 AFMIDQ63HM1 303 aa15.43■□□□□ 0.06
C9orf3-206ENST00000428313 C22orf42Q6IC83 251 aa15.43■□□□□ 0.06
C9orf3-206ENST00000428313 METTL7BQ6UX53 244 aa15.43■□□□□ 0.06
C9orf3-206ENST00000428313 CLEC20AQ6ZU45 233 aa15.43■□□□□ 0.06
C9orf3-206ENST00000428313 PLPPR4Q7Z2D5 763 aa15.43■□□□□ 0.06
C9orf3-206ENST00000428313 TRIM46Q7Z4K8 759 aa15.43■□□□□ 0.06
C9orf3-206ENST00000428313 DENND1CQ8IV53 801 aa15.43■□□□□ 0.06
C9orf3-206ENST00000428313 CDH26Q8IXH8 852 aa15.43■□□□□ 0.06
C9orf3-206ENST00000428313 FAM9CQ8IZT9 166 aa15.43■□□□□ 0.06
C9orf3-206ENST00000428313 DNAJC5GQ8N7S2 189 aa15.43■□□□□ 0.06
C9orf3-206ENST00000428313 B3GALNT2Q8NCR0 500 aa15.43■□□□□ 0.06
C9orf3-206ENST00000428313 FOXJ1Q92949 421 aa15.43■□□□□ 0.06
C9orf3-206ENST00000428313 OTUB1Q96FW1 271 aaPredicted RBP15.43■□□□□ 0.06
C9orf3-206ENST00000428313 TPD52L3Q96J77 140 aa15.43■□□□□ 0.06
C9orf3-206ENST00000428313 RLIMQ9NVW2 624 aa15.43■□□□□ 0.06
C9orf3-206ENST00000428313 CLEC2DQ9UHP7 191 aa15.43■□□□□ 0.06
C9orf3-206ENST00000428313 RLFQ13129 1914 aa15.43■□□□□ 0.06
C9orf3-206ENST00000428313 LOC285556D6RIA3 1793 aa15.43■□□□□ 0.06
C9orf3-206ENST00000428313 ZAR1LA6NP61 321 aa15.43■□□□□ 0.06
C9orf3-206ENST00000428313 DNASE2O00115 360 aaPredicted RBP15.43■□□□□ 0.06
C9orf3-206ENST00000428313 CASC3O15234 703 aaKnown RBP15.43■□□□□ 0.06
C9orf3-206ENST00000428313 CD9P21926 228 aa15.43■□□□□ 0.06
C9orf3-206ENST00000428313 NNMTP40261 264 aa15.43■□□□□ 0.06
C9orf3-206ENST00000428313 CD86P42081 329 aa15.43■□□□□ 0.06
C9orf3-206ENST00000428313 HSPA7P48741 367 aa15.43■□□□□ 0.06
C9orf3-206ENST00000428313 ADAM15Q13444 863 aa15.43■□□□□ 0.06
C9orf3-206ENST00000428313 PTGES3Q15185 160 aaKnown RBP15.43■□□□□ 0.06
C9orf3-206ENST00000428313 ZBTB6Q15916 424 aa15.43■□□□□ 0.06
C9orf3-206ENST00000428313 FAM209BQ5JX69 171 aa15.43■□□□□ 0.06
C9orf3-206ENST00000428313 LIPKQ5VXJ0 399 aa15.43■□□□□ 0.06
C9orf3-206ENST00000428313 C9orf57Q5W0N0 161 aa15.43■□□□□ 0.06
C9orf3-206ENST00000428313 ZNF704Q6ZNC4 412 aaPredicted RBP15.43■□□□□ 0.06
C9orf3-206ENST00000428313 RASSF6Q6ZTQ3 369 aa15.43■□□□□ 0.06
C9orf3-206ENST00000428313 MILR1Q7Z6M3 343 aa15.43■□□□□ 0.06
C9orf3-206ENST00000428313 LGI4Q8N135 537 aa15.43■□□□□ 0.06
C9orf3-206ENST00000428313 SLC29A3Q9BZD2 475 aa15.43■□□□□ 0.06
C9orf3-206ENST00000428313 SLC19A3Q9BZV2 496 aa15.43■□□□□ 0.06
C9orf3-206ENST00000428313 BRD7Q9NPI1 651 aa15.43■□□□□ 0.06
C9orf3-206ENST00000428313 HCN3Q9P1Z3 774 aa15.43■□□□□ 0.06
C9orf3-206ENST00000428313 COMMD3Q9UBI1 195 aa15.43■□□□□ 0.06
C9orf3-206ENST00000428313 ADAMTS5Q9UNA0 930 aa15.43■□□□□ 0.06
C9orf3-206ENST00000428313 DNMT3AQ9Y6K1 912 aaPredicted RBP15.43■□□□□ 0.06
C9orf3-206ENST00000428313 EVPLQ92817 2033 aa15.43■□□□□ 0.06
C9orf3-206ENST00000428313 MPTX1A8MV57 137 aa15.42■□□□□ 0.06
C9orf3-206ENST00000428313 STK25O00506 426 aa15.42■□□□□ 0.06
C9orf3-206ENST00000428313 RFXANKO14593 260 aa15.42■□□□□ 0.06
C9orf3-206ENST00000428313 SUV39H1O43463 412 aa15.42■□□□□ 0.06
C9orf3-206ENST00000428313 FGF2P09038 288 aa15.42■□□□□ 0.06
C9orf3-206ENST00000428313 ATXN1LP0C7T5 689 aaKnown RBP15.42■□□□□ 0.06
C9orf3-206ENST00000428313 BCKDHAP12694 445 aa15.42■□□□□ 0.06
C9orf3-206ENST00000428313 SRCP12931 536 aa15.42■□□□□ 0.06
C9orf3-206ENST00000428313 RPS14P62263 151 aaKnown RBP15.42■□□□□ 0.06
C9orf3-206ENST00000428313 MADCAM1Q13477 382 aa15.42■□□□□ 0.06
C9orf3-206ENST00000428313 ARHGAP15Q53QZ3 475 aa15.42■□□□□ 0.06
C9orf3-206ENST00000428313 MOB2Q70IA6 237 aa15.42■□□□□ 0.06
C9orf3-206ENST00000428313 HTR3DQ70Z44 454 aa15.42■□□□□ 0.06
C9orf3-206ENST00000428313 IL17RCQ8NAC3 791 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms