RNA–Protein interactions for RNA: ENST00000428136.1

LRCH3-204, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 3,205 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-204ENST00000428136 HPS1Q92902 700 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 FOXJ1Q92949 421 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 FOPNLQ96NB1 174 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 RACGAP1Q9H0H5 632 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 OR51E2Q9H255 320 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 MS4A12Q9NXJ0 267 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 NUP214P35658 2090 aaPredicted RBP7.52□□□□□ -1.21
LRCH3-204ENST00000428136 A0A1W2PRU2 124 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 ZNF197O14709 1029 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 BNIP3LO60238 219 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 LEFTY1O75610 366 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 CCNB2O95067 398 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 OPN1SWP03999 348 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 CTSLP07711 333 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 DDX5P17844 614 aaKnown RBP7.52□□□□□ -1.21
LRCH3-204ENST00000428136 PDHA2P29803 388 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 SERPINB1P30740 379 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 MMP12P39900 470 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 OR1E2P47887 323 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 TBPL1P62380 186 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 SLC5A12Q1EHB4 618 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 ZNF805Q5CZA5 627 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 KLHL17Q6TDP4 642 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 STX19Q8N4C7 294 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 SETD7Q8WTS6 366 aaKnown RBP7.52□□□□□ -1.21
LRCH3-204ENST00000428136 CIDECQ96AQ7 238 aaPredicted RBP7.52□□□□□ -1.21
LRCH3-204ENST00000428136 PPCDCQ96CD2 204 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 PDXPQ96GD0 296 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 PPP1R16AQ96I34 528 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 LINC00615Q96LM1 132 aaPredicted RBP7.52□□□□□ -1.21
LRCH3-204ENST00000428136 TRNT1Q96Q11 434 aaKnown RBP7.52□□□□□ -1.21
LRCH3-204ENST00000428136 TCF25Q9BQ70 676 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 CENPOQ9BU64 300 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 ZBP1Q9H171 429 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 ZNF556Q9HAH1 456 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 GPBP1L1Q9HC44 474 aaPredicted RBP7.52□□□□□ -1.21
LRCH3-204ENST00000428136 POLE4Q9NR33 117 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 SACM1LQ9NTJ5 587 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 SH2B3Q9UQQ2 575 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 CCL26Q9Y258 94 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 WBP11Q9Y2W2 641 aaKnown RBP7.52□□□□□ -1.21
LRCH3-204ENST00000428136 LSM2Q9Y333 95 aaKnown RBP7.52□□□□□ -1.21
LRCH3-204ENST00000428136 PIPSLA2A3N6 862 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 J3KTA2 159 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 UQCRC2P22695 453 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 IRS1P35568 1242 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 CRISP1P54107 249 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 CRISP3P54108 245 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 EPHA5P54756 1037 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 CDC42P60953 191 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 RHAGQ02094 409 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 ZNF284Q2VY69 593 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 PLAG1Q6DJT9 500 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 FRMPD2BQ6IN97 320 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 TMEM220Q6QAJ8 160 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 NXPE4Q6UWF7 544 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 LIPIQ6XZB0 460 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 FAM92BQ6ZTR7 304 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 RNF130Q86XS8 419 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 GPR156Q8NFN8 814 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 OR9Q2Q8NGE9 314 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 WDR48Q8TAF3 677 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 IRF7Q92985 503 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 COQ10AQ96MF6 247 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 FAM129BQ96TA1 746 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 SDHCQ99643 169 aaPredicted RBP7.52□□□□□ -1.21
LRCH3-204ENST00000428136 CTRCQ99895 268 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 FUZQ9BT04 418 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 C3orf14Q9HBI5 128 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 A4GALTQ9NPC4 353 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 MARK1Q9P0L2 795 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 REV1Q9UBZ9 1251 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 ABT1Q9ULW3 272 aaKnown RBP7.52□□□□□ -1.21
LRCH3-204ENST00000428136 SLC6A14Q9UN76 642 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 DOCK6Q96HP0 2047 aa7.51□□□□□ -1.21
LRCH3-204ENST00000428136 LOC110117498-PIK3R3F6TDL0 507 aa7.51□□□□□ -1.21
LRCH3-204ENST00000428136 FFAR1O14842 300 aa7.51□□□□□ -1.21
LRCH3-204ENST00000428136 GADD45GO95257 159 aa7.51□□□□□ -1.21
LRCH3-204ENST00000428136 SOD1P00441 154 aa7.51□□□□□ -1.21
LRCH3-204ENST00000428136 GASTP01350 101 aa7.51□□□□□ -1.21
LRCH3-204ENST00000428136 LRG1P02750 347 aa7.51□□□□□ -1.21
LRCH3-204ENST00000428136 DDX6P26196 483 aaKnown RBP eCLIP7.51□□□□□ -1.21
LRCH3-204ENST00000428136 HOXD12P35452 270 aa7.51□□□□□ -1.21
LRCH3-204ENST00000428136 IDH2P48735 452 aaKnown RBP7.51□□□□□ -1.21
LRCH3-204ENST00000428136 PRIM2P49643 509 aa7.51□□□□□ -1.21
LRCH3-204ENST00000428136 MC1RQ01726 317 aa7.51□□□□□ -1.21
LRCH3-204ENST00000428136 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.51□□□□□ -1.21
LRCH3-204ENST00000428136 C2orf80Q0P641 193 aa7.51□□□□□ -1.21
LRCH3-204ENST00000428136 SLC13A2Q13183 592 aa7.51□□□□□ -1.21
LRCH3-204ENST00000428136 NOGQ13253 232 aa7.51□□□□□ -1.21
LRCH3-204ENST00000428136 SLBPQ14493 270 aaKnown RBP eCLIP7.51□□□□□ -1.21
LRCH3-204ENST00000428136 PUM1Q14671 1186 aaKnown RBP eCLIP7.51□□□□□ -1.21
LRCH3-204ENST00000428136 KCNJ8Q15842 424 aa7.51□□□□□ -1.21
LRCH3-204ENST00000428136 TIMM50Q3ZCQ8 353 aa7.51□□□□□ -1.21
LRCH3-204ENST00000428136 ARSIQ5FYB1 569 aa7.51□□□□□ -1.21
LRCH3-204ENST00000428136 SPOUT1Q5T280 376 aaKnown RBP7.51□□□□□ -1.21
LRCH3-204ENST00000428136 SAXO2Q658L1 398 aa7.51□□□□□ -1.21
LRCH3-204ENST00000428136 GDPGP1Q6ZNW5 385 aa7.51□□□□□ -1.21
LRCH3-204ENST00000428136 CCDC149Q6ZUS6 474 aa7.51□□□□□ -1.21
LRCH3-204ENST00000428136 VN1R5Q7Z5H4 357 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms