RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 ILKAPQ9H0C8 392 aaPredicted RBP13.97□□□□□ -0.17
RTN4-210ENST00000427710 ACTR8Q9H981 624 aa13.97□□□□□ -0.17
RTN4-210ENST00000427710 COPS7BQ9H9Q2 264 aaPredicted RBP13.97□□□□□ -0.17
RTN4-210ENST00000427710 PRDM7Q9NQW5 492 aa13.97□□□□□ -0.17
RTN4-210ENST00000427710 TMEM216Q9P0N5 145 aa13.97□□□□□ -0.17
RTN4-210ENST00000427710 PSMC3IPQ9P2W1 217 aaPredicted RBP13.97□□□□□ -0.17
RTN4-210ENST00000427710 B3GNT3Q9Y2A9 372 aa13.97□□□□□ -0.17
RTN4-210ENST00000427710 FLNCQ14315 2725 aa13.97□□□□□ -0.17
RTN4-210ENST00000427710 IQANK1A0A1B0GTG1 560 aa13.96□□□□□ -0.17
RTN4-210ENST00000427710 A0A1W2PPM1 405 aa13.96□□□□□ -0.17
RTN4-210ENST00000427710 CCDC189A1A4V9 331 aa13.96□□□□□ -0.17
RTN4-210ENST00000427710 A8MUI8 341 aa13.96□□□□□ -0.17
RTN4-210ENST00000427710 TGFBR3LH3BV60 316 aa13.96□□□□□ -0.17
RTN4-210ENST00000427710 PCDH17O14917 1159 aa13.96□□□□□ -0.17
RTN4-210ENST00000427710 PYGBP11216 843 aa13.96□□□□□ -0.17
RTN4-210ENST00000427710 JAK1P23458 1154 aa13.96□□□□□ -0.17
RTN4-210ENST00000427710 GSTM2P28161 218 aa13.96□□□□□ -0.17
RTN4-210ENST00000427710 TNFRSF8P28908 595 aa13.96□□□□□ -0.17
RTN4-210ENST00000427710 PPP2R1BP30154 601 aa13.96□□□□□ -0.17
RTN4-210ENST00000427710 SOX11P35716 441 aa13.96□□□□□ -0.17
RTN4-210ENST00000427710 NEK2P51955 445 aa13.96□□□□□ -0.17
RTN4-210ENST00000427710 CCNG1P51959 295 aa13.96□□□□□ -0.17
RTN4-210ENST00000427710 LIM2P55344 173 aa13.96□□□□□ -0.17
RTN4-210ENST00000427710 RAB38P57729 211 aa13.96□□□□□ -0.17
RTN4-210ENST00000427710 RPS13P62277 151 aaKnown RBP13.96□□□□□ -0.17
RTN4-210ENST00000427710 VSNL1P62760 191 aa13.96□□□□□ -0.17
RTN4-210ENST00000427710 PCDH1Q08174 1060 aa13.96□□□□□ -0.17
RTN4-210ENST00000427710 MFAP5Q13361 173 aa13.96□□□□□ -0.17
RTN4-210ENST00000427710 CPSF6Q16630 551 aaKnown RBP eCLIP13.96□□□□□ -0.17
RTN4-210ENST00000427710 IGFL2Q6UWQ7 119 aa13.96□□□□□ -0.17
RTN4-210ENST00000427710 QSOX2Q6ZRP7 698 aa13.96□□□□□ -0.17
RTN4-210ENST00000427710 Q6ZS92 163 aa13.96□□□□□ -0.17
RTN4-210ENST00000427710 CLNKQ7Z7G1 428 aa13.96□□□□□ -0.17
RTN4-210ENST00000427710 HPS6Q86YV9 775 aa13.96□□□□□ -0.17
RTN4-210ENST00000427710 TMEM151AQ8N4L1 468 aa13.96□□□□□ -0.17
RTN4-210ENST00000427710 KIF2BQ8N4N8 673 aa13.96□□□□□ -0.17
RTN4-210ENST00000427710 OR52B6Q8NGF0 335 aa13.96□□□□□ -0.17
RTN4-210ENST00000427710 MZB1Q8WU39 189 aa13.96□□□□□ -0.17
RTN4-210ENST00000427710 TM9SF4Q92544 642 aa13.96□□□□□ -0.17
RTN4-210ENST00000427710 UBE2E3Q969T4 207 aa13.96□□□□□ -0.17
RTN4-210ENST00000427710 ATP6V1E2Q96A05 226 aa13.96□□□□□ -0.17
RTN4-210ENST00000427710 SEC16BQ96JE7 1060 aa13.96□□□□□ -0.17
RTN4-210ENST00000427710 SERINC2Q96SA4 455 aa13.96□□□□□ -0.17
RTN4-210ENST00000427710 MRPL46Q9H2W6 279 aaKnown RBP13.96□□□□□ -0.17
RTN4-210ENST00000427710 EPS8L2Q9H6S3 715 aa13.96□□□□□ -0.17
RTN4-210ENST00000427710 KCNK13Q9HB14 408 aa13.96□□□□□ -0.17
RTN4-210ENST00000427710 ZBTB26Q9HCK0 441 aa13.96□□□□□ -0.17
RTN4-210ENST00000427710 SEMA4BQ9NPR2 832 aaPredicted RBP13.96□□□□□ -0.17
RTN4-210ENST00000427710 DMRT3Q9NQL9 472 aa13.96□□□□□ -0.17
RTN4-210ENST00000427710 PRTFDC1Q9NRG1 225 aa13.96□□□□□ -0.17
RTN4-210ENST00000427710 PCTPQ9UKL6 214 aa13.96□□□□□ -0.17
RTN4-210ENST00000427710 TNPO3Q9Y5L0 923 aaKnown RBP13.96□□□□□ -0.17
RTN4-210ENST00000427710 DIDO1Q9BTC0 2240 aaKnown RBP13.95□□□□□ -0.18
RTN4-210ENST00000427710 A0A1B0GTL3 188 aa13.95□□□□□ -0.18
RTN4-210ENST00000427710 A8MT66 165 aa13.95□□□□□ -0.18
RTN4-210ENST00000427710 PPP6CO00743 305 aa13.95□□□□□ -0.18
RTN4-210ENST00000427710 MAN1A2O60476 641 aa13.95□□□□□ -0.18
RTN4-210ENST00000427710 CYC1P08574 325 aa13.95□□□□□ -0.18
RTN4-210ENST00000427710 ATP5A1P25705 553 aaKnown RBP13.95□□□□□ -0.18
RTN4-210ENST00000427710 UQCRFS1P47985 274 aa13.95□□□□□ -0.18
RTN4-210ENST00000427710 MTTPP55157 894 aa13.95□□□□□ -0.18
RTN4-210ENST00000427710 CDH13P55290 713 aa13.95□□□□□ -0.18
RTN4-210ENST00000427710 ARG2P78540 354 aa13.95□□□□□ -0.18
RTN4-210ENST00000427710 CRB2Q5IJ48 1285 aa13.95□□□□□ -0.18
RTN4-210ENST00000427710 LIPJQ5W064 366 aa13.95□□□□□ -0.18
RTN4-210ENST00000427710 PLAG1Q6DJT9 500 aa13.95□□□□□ -0.18
RTN4-210ENST00000427710 EFCAB3Q8N7B9 438 aa13.95□□□□□ -0.18
RTN4-210ENST00000427710 EPS8L3Q8TE67 593 aaKnown RBP13.95□□□□□ -0.18
RTN4-210ENST00000427710 MTBPQ96DY7 904 aa13.95□□□□□ -0.18
RTN4-210ENST00000427710 LMF1Q96S06 567 aa13.95□□□□□ -0.18
RTN4-210ENST00000427710 LPAR4Q99677 370 aa13.95□□□□□ -0.18
RTN4-210ENST00000427710 MAPKAP1Q9BPZ7 522 aa13.95□□□□□ -0.18
RTN4-210ENST00000427710 NPLQ9BXD5 320 aaPredicted RBP13.95□□□□□ -0.18
RTN4-210ENST00000427710 CLMPQ9H6B4 373 aa13.95□□□□□ -0.18
RTN4-210ENST00000427710 PRDM9Q9NQV7 894 aa13.95□□□□□ -0.18
RTN4-210ENST00000427710 PNO1Q9NRX1 252 aaKnown RBP13.95□□□□□ -0.18
RTN4-210ENST00000427710 FBXW2Q9UKT8 454 aa13.95□□□□□ -0.18
RTN4-210ENST00000427710 NTNG1Q9Y2I2 539 aa13.95□□□□□ -0.18
RTN4-210ENST00000427710 UBR5O95071 2799 aaPredicted RBP13.94□□□□□ -0.18
RTN4-210ENST00000427710 IGKV3D-11A0A0A0MRZ8 115 aa13.94□□□□□ -0.18
RTN4-210ENST00000427710 STX16-NPEPL1H3BU86 382 aa13.94□□□□□ -0.18
RTN4-210ENST00000427710 STX16O14662 325 aa13.94□□□□□ -0.18
RTN4-210ENST00000427710 ETHE1O95571 254 aa13.94□□□□□ -0.18
RTN4-210ENST00000427710 WDPCPO95876 746 aa13.94□□□□□ -0.18
RTN4-210ENST00000427710 RPS17P08708 135 aaKnown RBP13.94□□□□□ -0.18
RTN4-210ENST00000427710 SSR2P43308 183 aa13.94□□□□□ -0.18
RTN4-210ENST00000427710 SLC26A5P58743 744 aa13.94□□□□□ -0.18
RTN4-210ENST00000427710 ID2Q02363 134 aa13.94□□□□□ -0.18
RTN4-210ENST00000427710 ZNF33BQ06732 778 aa13.94□□□□□ -0.18
RTN4-210ENST00000427710 TGM3Q08188 693 aa13.94□□□□□ -0.18
RTN4-210ENST00000427710 ZRSR2Q15696 482 aaKnown RBP13.94□□□□□ -0.18
RTN4-210ENST00000427710 DEPDC1Q5TB30 811 aa13.94□□□□□ -0.18
RTN4-210ENST00000427710 KHDRBS2Q5VWX1 349 aaKnown RBP13.94□□□□□ -0.18
RTN4-210ENST00000427710 RIPOR1Q6ZS17 1223 aa13.94□□□□□ -0.18
RTN4-210ENST00000427710 ACOT4Q8N9L9 421 aa13.94□□□□□ -0.18
RTN4-210ENST00000427710 EIF1ADQ8N9N8 165 aaKnown RBP13.94□□□□□ -0.18
RTN4-210ENST00000427710 L3MBTL4Q8NA19 623 aa13.94□□□□□ -0.18
RTN4-210ENST00000427710 OR2W6PQ8NHA6 318 aa13.94□□□□□ -0.18
RTN4-210ENST00000427710 PPP4R1Q8TF05 950 aa13.94□□□□□ -0.18
RTN4-210ENST00000427710 SREK1Q8WXA9 508 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms