RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 TIFABQ6ZNK6 161 aa12.8□□□□□ -0.36
SNX3-204ENST00000426155 CUZD1Q86UP6 607 aa12.8□□□□□ -0.36
SNX3-204ENST00000426155 PLPP5Q8NEB5 264 aa12.8□□□□□ -0.36
SNX3-204ENST00000426155 HUS1BQ8NHY5 278 aa12.8□□□□□ -0.36
SNX3-204ENST00000426155 EPS8L3Q8TE67 593 aaKnown RBP12.8□□□□□ -0.36
SNX3-204ENST00000426155 PNPLA2Q96AD5 504 aa12.8□□□□□ -0.36
SNX3-204ENST00000426155 MIB2Q96AX9 1013 aa12.8□□□□□ -0.36
SNX3-204ENST00000426155 MTBPQ96DY7 904 aa12.8□□□□□ -0.36
SNX3-204ENST00000426155 SEC16BQ96JE7 1060 aa12.8□□□□□ -0.36
SNX3-204ENST00000426155 CNDP1Q96KN2 507 aa12.8□□□□□ -0.36
SNX3-204ENST00000426155 PTCHD1Q96NR3 888 aa12.8□□□□□ -0.36
SNX3-204ENST00000426155 MTERF1Q99551 399 aaKnown RBP12.8□□□□□ -0.36
SNX3-204ENST00000426155 MRPL57Q9BQC6 102 aaKnown RBP12.8□□□□□ -0.36
SNX3-204ENST00000426155 MRPL46Q9H2W6 279 aaKnown RBP12.8□□□□□ -0.36
SNX3-204ENST00000426155 OR51B5Q9H339 312 aa12.8□□□□□ -0.36
SNX3-204ENST00000426155 NOL11Q9H8H0 719 aaKnown RBP12.8□□□□□ -0.36
SNX3-204ENST00000426155 COPS7BQ9H9Q2 264 aaPredicted RBP12.8□□□□□ -0.36
SNX3-204ENST00000426155 ZBTB26Q9HCK0 441 aa12.8□□□□□ -0.36
SNX3-204ENST00000426155 PRDM7Q9NQW5 492 aa12.8□□□□□ -0.36
SNX3-204ENST00000426155 PLA2G3Q9NZ20 509 aa12.8□□□□□ -0.36
SNX3-204ENST00000426155 C19orf25Q9UFG5 118 aaPredicted RBP12.8□□□□□ -0.36
SNX3-204ENST00000426155 B3GNT3Q9Y2A9 372 aa12.8□□□□□ -0.36
SNX3-204ENST00000426155 RNF11Q9Y3C5 154 aa12.8□□□□□ -0.36
SNX3-204ENST00000426155 IGKV3D-11A0A0A0MRZ8 115 aa12.79□□□□□ -0.36
SNX3-204ENST00000426155 IQANK1A0A1B0GTG1 560 aa12.79□□□□□ -0.36
SNX3-204ENST00000426155 A0A1W2PPM1 405 aa12.79□□□□□ -0.36
SNX3-204ENST00000426155 A8MUA0 341 aa12.79□□□□□ -0.36
SNX3-204ENST00000426155 PSMD12O00232 456 aaPredicted RBP12.79□□□□□ -0.36
SNX3-204ENST00000426155 PPP6CO00743 305 aa12.79□□□□□ -0.36
SNX3-204ENST00000426155 PCDH17O14917 1159 aa12.79□□□□□ -0.36
SNX3-204ENST00000426155 B3GALT2O43825 422 aa12.79□□□□□ -0.36
SNX3-204ENST00000426155 PRMT3O60678 531 aa12.79□□□□□ -0.36
SNX3-204ENST00000426155 SMIM24O75264 130 aa12.79□□□□□ -0.36
SNX3-204ENST00000426155 ETHE1O95571 254 aa12.79□□□□□ -0.36
SNX3-204ENST00000426155 CYC1P08574 325 aa12.79□□□□□ -0.36
SNX3-204ENST00000426155 RPS17P08708 135 aaKnown RBP12.79□□□□□ -0.36
SNX3-204ENST00000426155 IL10P22301 178 aa12.79□□□□□ -0.36
SNX3-204ENST00000426155 ARL1P40616 181 aaPredicted RBP12.79□□□□□ -0.36
SNX3-204ENST00000426155 LIM2P55344 173 aa12.79□□□□□ -0.36
SNX3-204ENST00000426155 RAB38P57729 211 aa12.79□□□□□ -0.36
SNX3-204ENST00000426155 OR4D2P58180 307 aa12.79□□□□□ -0.36
SNX3-204ENST00000426155 RPS13P62277 151 aaKnown RBP12.79□□□□□ -0.36
SNX3-204ENST00000426155 PCDH1Q08174 1060 aa12.79□□□□□ -0.36
SNX3-204ENST00000426155 TRAF3Q13114 568 aa12.79□□□□□ -0.36
SNX3-204ENST00000426155 MFAP5Q13361 173 aa12.79□□□□□ -0.36
SNX3-204ENST00000426155 LGSNQ5TDP6 509 aa12.79□□□□□ -0.36
SNX3-204ENST00000426155 NIPAL1Q6NVV3 410 aa12.79□□□□□ -0.36
SNX3-204ENST00000426155 IGFL2Q6UWQ7 119 aa12.79□□□□□ -0.36
SNX3-204ENST00000426155 ISLR2Q6UXK2 745 aa12.79□□□□□ -0.36
SNX3-204ENST00000426155 QSOX2Q6ZRP7 698 aa12.79□□□□□ -0.36
SNX3-204ENST00000426155 Q6ZS92 163 aa12.79□□□□□ -0.36
SNX3-204ENST00000426155 CLNKQ7Z7G1 428 aa12.79□□□□□ -0.36
SNX3-204ENST00000426155 HPS6Q86YV9 775 aa12.79□□□□□ -0.36
SNX3-204ENST00000426155 CYP4X1Q8N118 509 aa12.79□□□□□ -0.36
SNX3-204ENST00000426155 ZADH2Q8N4Q0 377 aa12.79□□□□□ -0.36
SNX3-204ENST00000426155 EIF1ADQ8N9N8 165 aaKnown RBP12.79□□□□□ -0.36
SNX3-204ENST00000426155 CATSPER1Q8NEC5 780 aa12.79□□□□□ -0.36
SNX3-204ENST00000426155 OR2W6PQ8NHA6 318 aa12.79□□□□□ -0.36
SNX3-204ENST00000426155 CPT1CQ8TCG5 803 aa12.79□□□□□ -0.36
SNX3-204ENST00000426155 TM9SF4Q92544 642 aa12.79□□□□□ -0.36
SNX3-204ENST00000426155 C19orf60Q96EN9 201 aa12.79□□□□□ -0.36
SNX3-204ENST00000426155 ILKAPQ9H0C8 392 aaPredicted RBP12.79□□□□□ -0.36
SNX3-204ENST00000426155 EPS8L2Q9H6S3 715 aa12.79□□□□□ -0.36
SNX3-204ENST00000426155 SEMA4BQ9NPR2 832 aaPredicted RBP12.79□□□□□ -0.36
SNX3-204ENST00000426155 SLAMF7Q9NQ25 335 aa12.79□□□□□ -0.36
SNX3-204ENST00000426155 DMRT3Q9NQL9 472 aa12.79□□□□□ -0.36
SNX3-204ENST00000426155 MAP10Q9P2G4 905 aa12.79□□□□□ -0.36
SNX3-204ENST00000426155 CLDN16Q9Y5I7 305 aa12.79□□□□□ -0.36
SNX3-204ENST00000426155 MYOCOSA0A1B0GUC4 107 aa12.78□□□□□ -0.36
SNX3-204ENST00000426155 TCRBV16S1A1N1A0A5B0 115 aa12.78□□□□□ -0.36
SNX3-204ENST00000426155 A8MUI8 341 aa12.78□□□□□ -0.36
SNX3-204ENST00000426155 STX16-NPEPL1H3BU86 382 aa12.78□□□□□ -0.36
SNX3-204ENST00000426155 STX16O14662 325 aa12.78□□□□□ -0.36
SNX3-204ENST00000426155 MAN1A2O60476 641 aa12.78□□□□□ -0.36
SNX3-204ENST00000426155 ATP5A1P25705 553 aaKnown RBP12.78□□□□□ -0.36
SNX3-204ENST00000426155 SSR2P43308 183 aa12.78□□□□□ -0.36
SNX3-204ENST00000426155 UQCRFS1P47985 274 aa12.78□□□□□ -0.36
SNX3-204ENST00000426155 NEK2P51955 445 aa12.78□□□□□ -0.36
SNX3-204ENST00000426155 MTTPP55157 894 aa12.78□□□□□ -0.36
SNX3-204ENST00000426155 CDH13P55290 713 aa12.78□□□□□ -0.36
SNX3-204ENST00000426155 SLC26A5P58743 744 aa12.78□□□□□ -0.36
SNX3-204ENST00000426155 ZRSR2Q15696 482 aaKnown RBP12.78□□□□□ -0.36
SNX3-204ENST00000426155 CRB2Q5IJ48 1285 aa12.78□□□□□ -0.36
SNX3-204ENST00000426155 KHDRBS2Q5VWX1 349 aaKnown RBP12.78□□□□□ -0.36
SNX3-204ENST00000426155 LIPJQ5W064 366 aa12.78□□□□□ -0.36
SNX3-204ENST00000426155 PLAG1Q6DJT9 500 aa12.78□□□□□ -0.36
SNX3-204ENST00000426155 SCUBE1Q8IWY4 988 aa12.78□□□□□ -0.36
SNX3-204ENST00000426155 KIF2BQ8N4N8 673 aa12.78□□□□□ -0.36
SNX3-204ENST00000426155 WDR20Q8TBZ3 569 aa12.78□□□□□ -0.36
SNX3-204ENST00000426155 PPP4R1Q8TF05 950 aa12.78□□□□□ -0.36
SNX3-204ENST00000426155 UBE2E3Q969T4 207 aa12.78□□□□□ -0.36
SNX3-204ENST00000426155 KCNC2Q96PR1 638 aa12.78□□□□□ -0.36
SNX3-204ENST00000426155 SERINC2Q96SA4 455 aa12.78□□□□□ -0.36
SNX3-204ENST00000426155 NPAS2Q99743 824 aa12.78□□□□□ -0.36
SNX3-204ENST00000426155 MAPKAP1Q9BPZ7 522 aa12.78□□□□□ -0.36
SNX3-204ENST00000426155 NPLQ9BXD5 320 aaPredicted RBP12.78□□□□□ -0.36
SNX3-204ENST00000426155 PRDM9Q9NQV7 894 aa12.78□□□□□ -0.36
SNX3-204ENST00000426155 FETUBQ9UGM5 382 aa12.78□□□□□ -0.36
SNX3-204ENST00000426155 DAPP1Q9UN19 280 aa12.78□□□□□ -0.36
SNX3-204ENST00000426155 NTNG1Q9Y2I2 539 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms