RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 TIGD2Q4W5G0 525 aa14.89□□□□□ -0.03
SHOX2-202ENST00000425436 PRAMEF13Q5VWM6 474 aa14.89□□□□□ -0.03
SHOX2-202ENST00000425436 FCRL6Q6DN72 434 aa14.89□□□□□ -0.03
SHOX2-202ENST00000425436 FIGLAQ6QHK4 219 aa14.89□□□□□ -0.03
SHOX2-202ENST00000425436 AQP12AQ8IXF9 295 aa14.89□□□□□ -0.03
SHOX2-202ENST00000425436 PQLC1Q8N2U9 271 aa14.89□□□□□ -0.03
SHOX2-202ENST00000425436 C19orf47Q8N9M1 422 aaKnown RBP14.89□□□□□ -0.03
SHOX2-202ENST00000425436 OR8J3Q8NGG0 315 aa14.89□□□□□ -0.03
SHOX2-202ENST00000425436 WDR20Q8TBZ3 569 aa14.89□□□□□ -0.03
SHOX2-202ENST00000425436 NRG4Q8WWG1 115 aa14.89□□□□□ -0.03
SHOX2-202ENST00000425436 MTFMTQ96DP5 389 aaKnown RBP14.89□□□□□ -0.03
SHOX2-202ENST00000425436 RNF31Q96EP0 1072 aa14.89□□□□□ -0.03
SHOX2-202ENST00000425436 SLC41A2Q96JW4 573 aa14.89□□□□□ -0.03
SHOX2-202ENST00000425436 ZNF184Q99676 751 aaPredicted RBP14.89□□□□□ -0.03
SHOX2-202ENST00000425436 CTRCQ99895 268 aa14.89□□□□□ -0.03
SHOX2-202ENST00000425436 HAUS8Q9BT25 410 aa14.89□□□□□ -0.03
SHOX2-202ENST00000425436 DPH7Q9BTV6 452 aa14.89□□□□□ -0.03
SHOX2-202ENST00000425436 PCBD2Q9H0N5 130 aa14.89□□□□□ -0.03
SHOX2-202ENST00000425436 ACTL8Q9H568 366 aa14.89□□□□□ -0.03
SHOX2-202ENST00000425436 CLMPQ9H6B4 373 aa14.89□□□□□ -0.03
SHOX2-202ENST00000425436 RMND5AQ9H871 391 aa14.89□□□□□ -0.03
SHOX2-202ENST00000425436 IL1RL2Q9HB29 575 aa14.89□□□□□ -0.03
SHOX2-202ENST00000425436 SLC6A20Q9NP91 592 aa14.89□□□□□ -0.03
SHOX2-202ENST00000425436 CUEDC1Q9NWM3 386 aaPredicted RBP14.89□□□□□ -0.03
SHOX2-202ENST00000425436 PACSIN3Q9UKS6 424 aa14.89□□□□□ -0.03
SHOX2-202ENST00000425436 IGKV1-8A0A0C4DH67 115 aa14.88□□□□□ -0.03
SHOX2-202ENST00000425436 H3BNX3 289 aa14.88□□□□□ -0.03
SHOX2-202ENST00000425436 H7BY64 318 aa14.88□□□□□ -0.03
SHOX2-202ENST00000425436 PLD2O14939 933 aa14.88□□□□□ -0.03
SHOX2-202ENST00000425436 HCRTR1O43613 425 aa14.88□□□□□ -0.03
SHOX2-202ENST00000425436 JMJD7P0C870 316 aa14.88□□□□□ -0.03
SHOX2-202ENST00000425436 HNRNPFP52597 415 aaKnown RBP14.88□□□□□ -0.03
SHOX2-202ENST00000425436 GABREP78334 506 aa14.88□□□□□ -0.03
SHOX2-202ENST00000425436 GPR19Q15760 415 aa14.88□□□□□ -0.03
SHOX2-202ENST00000425436 MAPKAPK3Q16644 382 aa14.88□□□□□ -0.03
SHOX2-202ENST00000425436 PAGE3Q5JUK9 113 aa14.88□□□□□ -0.03
SHOX2-202ENST00000425436 ATG9BQ674R7 924 aa14.88□□□□□ -0.03
SHOX2-202ENST00000425436 MED27Q6P2C8 311 aa14.88□□□□□ -0.03
SHOX2-202ENST00000425436 ERMP1Q7Z2K6 904 aa14.88□□□□□ -0.03
SHOX2-202ENST00000425436 D2HGDHQ8N465 521 aa14.88□□□□□ -0.03
SHOX2-202ENST00000425436 TNIP2Q8NFZ5 429 aa14.88□□□□□ -0.03
SHOX2-202ENST00000425436 SLC13A3Q8WWT9 602 aa14.88□□□□□ -0.03
SHOX2-202ENST00000425436 POP5Q969H6 163 aaKnown RBP14.88□□□□□ -0.03
SHOX2-202ENST00000425436 PMEPA1Q969W9 287 aa14.88□□□□□ -0.03
SHOX2-202ENST00000425436 TMEM125Q96AQ2 219 aa14.88□□□□□ -0.03
SHOX2-202ENST00000425436 TESCQ96BS2 214 aa14.88□□□□□ -0.03
SHOX2-202ENST00000425436 FCRL1Q96LA6 429 aa14.88□□□□□ -0.03
SHOX2-202ENST00000425436 PRAP1Q96NZ9 151 aa14.88□□□□□ -0.03
SHOX2-202ENST00000425436 OR6C1Q96RD1 312 aa14.88□□□□□ -0.03
SHOX2-202ENST00000425436 KLHL4Q9C0H6 718 aa14.88□□□□□ -0.03
SHOX2-202ENST00000425436 APMAPQ9HDC9 416 aa14.88□□□□□ -0.03
SHOX2-202ENST00000425436 PDE7BQ9NP56 450 aa14.88□□□□□ -0.03
SHOX2-202ENST00000425436 CMTM6Q9NX76 183 aa14.88□□□□□ -0.03
SHOX2-202ENST00000425436 ACTR3BQ9P1U1 418 aa14.88□□□□□ -0.03
SHOX2-202ENST00000425436 RUVBL1Q9Y265 456 aaKnown RBP14.88□□□□□ -0.03
SHOX2-202ENST00000425436 MSRB2Q9Y3D2 182 aa14.88□□□□□ -0.03
SHOX2-202ENST00000425436 TSC22D4Q9Y3Q8 395 aa14.88□□□□□ -0.03
SHOX2-202ENST00000425436 NEUROG3Q9Y4Z2 214 aa14.88□□□□□ -0.03
SHOX2-202ENST00000425436 AK5Q9Y6K8 562 aa14.88□□□□□ -0.03
SHOX2-202ENST00000425436 TCRBV3S1A0A5B6 114 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 ASPDHA6ND91 283 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 E7EQ34 232 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 FOXE1O00358 373 aaPredicted RBP14.87□□□□□ -0.03
SHOX2-202ENST00000425436 NME4O00746 187 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 TNFSF15O95150 251 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 PGRP06401 933 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 C1GALT1C1LP0DN25 315 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 PRPS1L1P21108 318 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 SLC7A1P30825 629 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 MLLT3P42568 568 aaPredicted RBP14.87□□□□□ -0.03
SHOX2-202ENST00000425436 NEK2P51955 445 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 PHEXP78562 749 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 COL9A2Q14055 689 aaPredicted RBP14.87□□□□□ -0.03
SHOX2-202ENST00000425436 DEFB110Q30KQ9 67 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 NANOGP8Q6NSW7 305 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 LCTLQ6UWM7 567 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 SLCO4C1Q6ZQN7 724 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 PROSER1Q86XN7 944 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 KMT5CQ86Y97 462 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 CARFQ8N187 725 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 BMPERQ8N8U9 685 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 TCTN2Q96GX1 697 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 NANOGQ9H9S0 305 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 POLR1BQ9H9Y6 1135 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 SLC39A1Q9NY26 324 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 ADGRE2Q9UHX3 823 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 AP4S1Q9Y587 144 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 NCOR2Q9Y618 2525 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 FRYQ5TBA9 3013 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 SPTBP11277 2137 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 PRAMEF4O60810 478 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 ERN1O75460 977 aaKnown RBP14.87□□□□□ -0.03
SHOX2-202ENST00000425436 CTSBP07858 339 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 HTR1EP28566 365 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 C21orf58P58505 322 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 ABATP80404 500 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 MRPS22P82650 360 aaKnown RBP14.87□□□□□ -0.03
SHOX2-202ENST00000425436 MC2RQ01718 297 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 SRSF11Q05519 484 aaKnown RBP14.87□□□□□ -0.03
SHOX2-202ENST00000425436 EIF3IQ13347 325 aaKnown RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms