RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 CLDN23Q96B33 292 aa25.22■■□□□ 1.63
LDB1-202ENST00000425280 SLC47A1Q96FL8 570 aa25.22■■□□□ 1.63
LDB1-202ENST00000425280 ZNF597Q96LX8 424 aa25.22■■□□□ 1.63
LDB1-202ENST00000425280 NR1H4Q96RI1 486 aaPredicted RBP25.22■■□□□ 1.63
LDB1-202ENST00000425280 SPATA9Q9BWV2 254 aa25.22■■□□□ 1.63
LDB1-202ENST00000425280 PCED1AQ9H1Q7 454 aa25.22■■□□□ 1.63
LDB1-202ENST00000425280 PRDM7Q9NQW5 492 aa25.22■■□□□ 1.63
LDB1-202ENST00000425280 C7orf72A4D263 438 aa25.21■■□□□ 1.63
LDB1-202ENST00000425280 OR2A25A4D2G3 310 aa25.21■■□□□ 1.63
LDB1-202ENST00000425280 TNFSF14O43557 240 aa25.21■■□□□ 1.63
LDB1-202ENST00000425280 MAGP20916 626 aa25.21■■□□□ 1.63
LDB1-202ENST00000425280 CD38P28907 300 aa25.21■■□□□ 1.63
LDB1-202ENST00000425280 MVDP53602 400 aa25.21■■□□□ 1.63
LDB1-202ENST00000425280 MLLT1Q03111 559 aaPredicted RBP25.21■■□□□ 1.63
LDB1-202ENST00000425280 INTS11Q5TA45 600 aaKnown RBP25.21■■□□□ 1.63
LDB1-202ENST00000425280 VN1R4Q7Z5H5 301 aa25.21■■□□□ 1.63
LDB1-202ENST00000425280 TRIML2Q8N7C3 387 aa25.21■■□□□ 1.63
LDB1-202ENST00000425280 OR2L5Q8NG80 312 aa25.21■■□□□ 1.63
LDB1-202ENST00000425280 FCRL4Q96PJ5 515 aa25.21■■□□□ 1.63
LDB1-202ENST00000425280 GPATCH2Q9NW75 528 aa25.21■■□□□ 1.63
LDB1-202ENST00000425280 TDRD6O60522 2096 aaKnown RBP25.21■■□□□ 1.63
LDB1-202ENST00000425280 STK25O00506 426 aa25.21■■□□□ 1.63
LDB1-202ENST00000425280 DENRO43583 198 aaKnown RBP25.21■■□□□ 1.63
LDB1-202ENST00000425280 NUDT7P0C024 238 aa25.21■■□□□ 1.63
LDB1-202ENST00000425280 MAOBP27338 520 aa25.21■■□□□ 1.63
LDB1-202ENST00000425280 PJA1Q8NG27 643 aa25.21■■□□□ 1.63
LDB1-202ENST00000425280 GATA6Q92908 595 aa25.21■■□□□ 1.63
LDB1-202ENST00000425280 ZNF764Q96H86 408 aaPredicted RBP25.21■■□□□ 1.63
LDB1-202ENST00000425280 KCNC2Q96PR1 638 aa25.21■■□□□ 1.63
LDB1-202ENST00000425280 SLAMF7Q9NQ25 335 aa25.21■■□□□ 1.63
LDB1-202ENST00000425280 C5AR2Q9P296 337 aa25.21■■□□□ 1.63
LDB1-202ENST00000425280 OAZ3Q9UMX2 235 aa25.21■■□□□ 1.63
LDB1-202ENST00000425280 AP4B1Q9Y6B7 739 aa25.21■■□□□ 1.63
LDB1-202ENST00000425280 GOLGA4Q13439 2230 aaKnown RBP25.2■■□□□ 1.62
LDB1-202ENST00000425280 FAM58BPP0C7Q3 252 aa25.2■■□□□ 1.62
LDB1-202ENST00000425280 ARFIP1P53367 373 aa25.2■■□□□ 1.62
LDB1-202ENST00000425280 RPL6Q02878 288 aaKnown RBP25.2■■□□□ 1.62
LDB1-202ENST00000425280 FBXO42Q6P3S6 717 aa25.2■■□□□ 1.62
LDB1-202ENST00000425280 FAM46DQ8NEK8 389 aa25.2■■□□□ 1.62
LDB1-202ENST00000425280 OR8K5Q8NH50 307 aa25.2■■□□□ 1.62
LDB1-202ENST00000425280 UCN3Q969E3 161 aa25.2■■□□□ 1.62
LDB1-202ENST00000425280 ACSL6Q9UKU0 697 aa25.2■■□□□ 1.62
LDB1-202ENST00000425280 FAM221BA6H8Z2 402 aa25.19■■□□□ 1.62
LDB1-202ENST00000425280 PDLIM1O00151 329 aa25.19■■□□□ 1.62
LDB1-202ENST00000425280 CLOCKO15516 846 aa25.19■■□□□ 1.62
LDB1-202ENST00000425280 PDPK1O15530 556 aa25.19■■□□□ 1.62
LDB1-202ENST00000425280 IL1RNP18510 177 aa25.19■■□□□ 1.62
LDB1-202ENST00000425280 HIST1H1TP22492 207 aaPredicted RBP25.19■■□□□ 1.62
LDB1-202ENST00000425280 GTF2A1P52655 376 aaPredicted RBP25.19■■□□□ 1.62
LDB1-202ENST00000425280 COX20Q5RI15 118 aa25.19■■□□□ 1.62
LDB1-202ENST00000425280 FCRL6Q6DN72 434 aa25.19■■□□□ 1.62
LDB1-202ENST00000425280 CBR4Q8N4T8 237 aa25.19■■□□□ 1.62
LDB1-202ENST00000425280 CAMKK1Q8N5S9 505 aa25.19■■□□□ 1.62
LDB1-202ENST00000425280 NATD1Q8N6N6 113 aa25.19■■□□□ 1.62
LDB1-202ENST00000425280 ZDHHC1Q8WTX9 485 aa25.19■■□□□ 1.62
LDB1-202ENST00000425280 C9orf16Q9BUW7 83 aa25.19■■□□□ 1.62
LDB1-202ENST00000425280 YY1AP1Q9H869 796 aa25.19■■□□□ 1.62
LDB1-202ENST00000425280 UTS2RQ9UKP6 389 aa25.19■■□□□ 1.62
LDB1-202ENST00000425280 ACOX3O15254 700 aa25.19■■□□□ 1.62
LDB1-202ENST00000425280 ATP5A1P25705 553 aaKnown RBP25.19■■□□□ 1.62
LDB1-202ENST00000425280 C6orf52Q5T4I8 152 aa25.19■■□□□ 1.62
LDB1-202ENST00000425280 TRIM40Q6P9F5 258 aa25.19■■□□□ 1.62
LDB1-202ENST00000425280 SPRED1Q7Z699 444 aa25.19■■□□□ 1.62
LDB1-202ENST00000425280 PACRGLQ8N7B6 248 aa25.19■■□□□ 1.62
LDB1-202ENST00000425280 ACOT4Q8N9L9 421 aa25.19■■□□□ 1.62
LDB1-202ENST00000425280 OR52N2Q8NGI0 321 aa25.19■■□□□ 1.62
LDB1-202ENST00000425280 POP5Q969H6 163 aaKnown RBP25.19■■□□□ 1.62
LDB1-202ENST00000425280 Q9H521 79 aa25.19■■□□□ 1.62
LDB1-202ENST00000425280 MAGIXQ9H6Y5 334 aa25.19■■□□□ 1.62
LDB1-202ENST00000425280 GON4LQ3T8J9 2241 aa25.18■■□□□ 1.62
LDB1-202ENST00000425280 CSF2P04141 144 aa25.18■■□□□ 1.62
LDB1-202ENST00000425280 DDX5P17844 614 aaKnown RBP25.18■■□□□ 1.62
LDB1-202ENST00000425280 PCBP4P57723 403 aaKnown RBP25.18■■□□□ 1.62
LDB1-202ENST00000425280 STXBP1P61764 594 aaKnown RBP25.18■■□□□ 1.62
LDB1-202ENST00000425280 SLAMF1Q13291 335 aa25.18■■□□□ 1.62
LDB1-202ENST00000425280 VEZF1Q14119 521 aa25.18■■□□□ 1.62
LDB1-202ENST00000425280 SLC9A5Q14940 896 aa25.18■■□□□ 1.62
LDB1-202ENST00000425280 TMTC4Q5T4D3 741 aa25.18■■□□□ 1.62
LDB1-202ENST00000425280 NDUFAF5Q5TEU4 345 aa25.18■■□□□ 1.62
LDB1-202ENST00000425280 MRM1Q6IN84 353 aaKnown RBP25.18■■□□□ 1.62
LDB1-202ENST00000425280 FIGLAQ6QHK4 219 aa25.18■■□□□ 1.62
LDB1-202ENST00000425280 ANGPTL8Q6UXH0 198 aa25.18■■□□□ 1.62
LDB1-202ENST00000425280 EID3Q8N140 333 aa25.18■■□□□ 1.62
LDB1-202ENST00000425280 SRFBP1Q8NEF9 429 aaKnown RBP25.18■■□□□ 1.62
LDB1-202ENST00000425280 OR5AK3PQ8NH89 298 aa25.18■■□□□ 1.62
LDB1-202ENST00000425280 OR5P2Q8WZ92 322 aa25.18■■□□□ 1.62
LDB1-202ENST00000425280 N4BP2L2Q92802 583 aaPredicted RBP25.18■■□□□ 1.62
LDB1-202ENST00000425280 EXOSC8Q96B26 276 aaKnown RBP25.18■■□□□ 1.62
LDB1-202ENST00000425280 BDH2Q9BUT1 245 aa25.18■■□□□ 1.62
LDB1-202ENST00000425280 CXorf36Q9H7Y0 433 aa25.18■■□□□ 1.62
LDB1-202ENST00000425280 NTN4Q9HB63 628 aa25.18■■□□□ 1.62
LDB1-202ENST00000425280 ASB4Q9Y574 426 aa25.18■■□□□ 1.62
LDB1-202ENST00000425280 ENTPD2Q9Y5L3 495 aa25.18■■□□□ 1.62
LDB1-202ENST00000425280 C2orf74A8MZ97 194 aa25.17■■□□□ 1.62
LDB1-202ENST00000425280 CTSVO60911 334 aa25.17■■□□□ 1.62
LDB1-202ENST00000425280 UBTFL6P0CB48 400 aaPredicted RBP25.17■■□□□ 1.62
LDB1-202ENST00000425280 DRD2P14416 443 aa25.17■■□□□ 1.62
LDB1-202ENST00000425280 SOAT1P35610 550 aa25.17■■□□□ 1.62
LDB1-202ENST00000425280 FRKP42685 505 aaPredicted RBP25.17■■□□□ 1.62
LDB1-202ENST00000425280 CRATP43155 626 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms