RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 C1orf226A1L170 272 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 MID1O15344 667 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 VIPP01282 170 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 HSD3B1P14060 373 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 POU3F3P20264 500 aaPredicted RBP10.22□□□□□ -0.77
CUX1-205ENST00000425244 HSD3B2P26439 372 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 CD6P30203 668 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 MMP12P39900 470 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 HBA1P69905 142 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 KCNJ10P78508 379 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 NPRL3Q12980 569 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 VEZF1Q14119 521 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 FAM180BQ6P0A1 224 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 COMMD6Q7Z4G1 85 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 BTLAQ7Z6A9 289 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 WDR48Q8TAF3 677 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 CHTF18Q8WVB6 975 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 ZNF566Q969W8 418 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 COX4I2Q96KJ9 171 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 NDRG4Q9ULP0 352 aaKnown RBP10.22□□□□□ -0.77
CUX1-205ENST00000425244 DYRK1BQ9Y463 629 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 MAP4K5Q9Y4K4 846 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 N6AMT1Q9Y5N5 214 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 GOLGA4Q13439 2230 aaKnown RBP10.22□□□□□ -0.77
CUX1-205ENST00000425244 KIAA1549LQ6ZVL6 1849 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 DOCK9Q9BZ29 2069 aa10.21□□□□□ -0.77
CUX1-205ENST00000425244 A0A1W2PPC1 479 aa10.21□□□□□ -0.77
CUX1-205ENST00000425244 BOLA2-SMG1P6H3BVE0 249 aa10.21□□□□□ -0.77
CUX1-205ENST00000425244 M0QX08 132 aa10.21□□□□□ -0.77
CUX1-205ENST00000425244 NPC1O15118 1278 aa10.21□□□□□ -0.77
CUX1-205ENST00000425244 PCDHGA12O60330 932 aa10.21□□□□□ -0.77
CUX1-205ENST00000425244 MMP20O60882 483 aa10.21□□□□□ -0.77
CUX1-205ENST00000425244 PCSK2P16519 638 aa10.21□□□□□ -0.77
CUX1-205ENST00000425244 SOAT1P35610 550 aa10.21□□□□□ -0.77
CUX1-205ENST00000425244 PRIM2P49643 509 aa10.21□□□□□ -0.77
CUX1-205ENST00000425244 ST13P50502 369 aaKnown RBP10.21□□□□□ -0.77
CUX1-205ENST00000425244 CCR3P51677 355 aa10.21□□□□□ -0.77
CUX1-205ENST00000425244 COL19A1Q14993 1142 aa10.21□□□□□ -0.77
CUX1-205ENST00000425244 ADPRMQ3LIE5 342 aa10.21□□□□□ -0.77
CUX1-205ENST00000425244 RAET1GQ6H3X3 334 aa10.21□□□□□ -0.77
CUX1-205ENST00000425244 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.21□□□□□ -0.77
CUX1-205ENST00000425244 DCDC5Q6ZRR9 648 aa10.21□□□□□ -0.77
CUX1-205ENST00000425244 IGFN1Q86VF2 1251 aa10.21□□□□□ -0.77
CUX1-205ENST00000425244 P2RY8Q86VZ1 359 aa10.21□□□□□ -0.77
CUX1-205ENST00000425244 RASGRP3Q8IV61 690 aa10.21□□□□□ -0.77
CUX1-205ENST00000425244 PGBD3Q8N328 593 aa10.21□□□□□ -0.77
CUX1-205ENST00000425244 TRUB1Q8WWH5 349 aaKnown RBP10.21□□□□□ -0.77
CUX1-205ENST00000425244 C11orf24Q96F05 449 aaPredicted RBP10.21□□□□□ -0.77
CUX1-205ENST00000425244 SLC35A5Q9BS91 424 aa10.21□□□□□ -0.77
CUX1-205ENST00000425244 DUSP21Q9H596 190 aa10.21□□□□□ -0.77
CUX1-205ENST00000425244 RAD18Q9NS91 495 aa10.21□□□□□ -0.77
CUX1-205ENST00000425244 BTNL2Q9UIR0 455 aa10.21□□□□□ -0.77
CUX1-205ENST00000425244 TNFRSF11BO00300 401 aa10.21□□□□□ -0.78
CUX1-205ENST00000425244 NADKO95544 446 aaPredicted RBP10.21□□□□□ -0.78
CUX1-205ENST00000425244 C1orf105O95561 183 aa10.21□□□□□ -0.78
CUX1-205ENST00000425244 LCKP06239 509 aa10.21□□□□□ -0.78
CUX1-205ENST00000425244 ADRB3P13945 408 aa10.21□□□□□ -0.78
CUX1-205ENST00000425244 ZNF12P17014 697 aa10.21□□□□□ -0.78
CUX1-205ENST00000425244 ZNF8P17098 575 aaPredicted RBP10.21□□□□□ -0.78
CUX1-205ENST00000425244 IDUAP35475 653 aa10.21□□□□□ -0.78
CUX1-205ENST00000425244 CHI3L1P36222 383 aaPredicted RBP10.21□□□□□ -0.78
CUX1-205ENST00000425244 EIF2DP41214 584 aaKnown RBP10.21□□□□□ -0.78
CUX1-205ENST00000425244 HNRNPFP52597 415 aaKnown RBP10.21□□□□□ -0.78
CUX1-205ENST00000425244 NCS1P62166 190 aa10.21□□□□□ -0.78
CUX1-205ENST00000425244 ZNF33BQ06732 778 aa10.21□□□□□ -0.78
CUX1-205ENST00000425244 ZNF763Q0D2J5 394 aa10.21□□□□□ -0.78
CUX1-205ENST00000425244 CNTN1Q12860 1018 aa10.21□□□□□ -0.78
CUX1-205ENST00000425244 SMAD4Q13485 552 aaKnown RBP10.21□□□□□ -0.78
CUX1-205ENST00000425244 CLCA4Q14CN2 919 aa10.21□□□□□ -0.78
CUX1-205ENST00000425244 RGS21Q2M5E4 152 aa10.21□□□□□ -0.78
CUX1-205ENST00000425244 TMEM236Q5W0B7 351 aa10.21□□□□□ -0.78
CUX1-205ENST00000425244 GPR155Q7Z3F1 870 aa10.21□□□□□ -0.78
CUX1-205ENST00000425244 ADCK1Q86TW2 530 aa10.21□□□□□ -0.78
CUX1-205ENST00000425244 TSPYL5Q86VY4 417 aaPredicted RBP10.21□□□□□ -0.78
CUX1-205ENST00000425244 P3H2Q8IVL5 708 aa10.21□□□□□ -0.78
CUX1-205ENST00000425244 NFKBIDQ8NI38 313 aa10.21□□□□□ -0.78
CUX1-205ENST00000425244 RPL3LQ92901 407 aaKnown RBP10.21□□□□□ -0.78
CUX1-205ENST00000425244 TBC1D20Q96BZ9 403 aa10.21□□□□□ -0.78
CUX1-205ENST00000425244 LRIG1Q96JA1 1093 aa10.21□□□□□ -0.78
CUX1-205ENST00000425244 C7orf34Q96L11 122 aa10.21□□□□□ -0.78
CUX1-205ENST00000425244 IL17FQ96PD4 163 aa10.21□□□□□ -0.78
CUX1-205ENST00000425244 DOHHQ9BU89 302 aa10.21□□□□□ -0.78
CUX1-205ENST00000425244 ACAT2Q9BWD1 397 aa10.21□□□□□ -0.78
CUX1-205ENST00000425244 PHF7Q9BWX1 381 aaPredicted RBP10.21□□□□□ -0.78
CUX1-205ENST00000425244 MKRN2Q9H000 416 aaKnown RBP10.21□□□□□ -0.78
CUX1-205ENST00000425244 TRIM39Q9HCM9 518 aa10.21□□□□□ -0.78
CUX1-205ENST00000425244 PRDM6Q9NQX0 595 aa10.21□□□□□ -0.78
CUX1-205ENST00000425244 PNMA8BQ9ULN7 279 aaPredicted RBP10.21□□□□□ -0.78
CUX1-205ENST00000425244 PLAGL1Q9UM63 463 aa10.21□□□□□ -0.78
CUX1-205ENST00000425244 CORO2BQ9UQ03 480 aa10.21□□□□□ -0.78
CUX1-205ENST00000425244 EXO1Q9UQ84 846 aaKnown RBP10.21□□□□□ -0.78
CUX1-205ENST00000425244 PRKAB1Q9Y478 270 aa10.21□□□□□ -0.78
CUX1-205ENST00000425244 GON4LQ3T8J9 2241 aa10.21□□□□□ -0.78
CUX1-205ENST00000425244 A0A1W2PP55 124 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 C1QTNF3-AMACRE9PGA6 284 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 GABARAPO95166 117 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 PCDH8O95206 1070 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 KLF8O95600 359 aaPredicted RBP10.2□□□□□ -0.78
CUX1-205ENST00000425244 KLK1P06870 262 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 IL9P15248 144 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms