RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 FFAR2O15552 330 aa10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 LANCL1O43813 399 aa10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 VPS26AO75436 327 aa10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 RFPL3O75679 317 aa10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 PAHP00439 452 aa10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 ZNF865P0CJ78 1059 aaPredicted RBP10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 RPL17P18621 184 aaKnown RBP10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 RPL35P42766 123 aaKnown RBP10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 SRP9P49458 86 aaKnown RBP10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 CPT1AP50416 773 aa10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 ZNF33BQ06732 778 aa10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 ABHD18Q0P651 414 aa10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 TIMM50Q3ZCQ8 353 aa10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 GLT6D1Q7Z4J2 308 aa10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 MEX3DQ86XN8 651 aaKnown RBP10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 KIF18BQ86Y91 864 aa10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 GPALPP1Q8IXQ4 340 aa10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 C3orf58Q8NDZ4 430 aa10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 APIPQ96GX9 242 aa10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 RBCK1Q9BYM8 510 aa10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 ACPTQ9BZG2 426 aa10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 HDHD2Q9H0R4 259 aa10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 PPA2Q9H2U2 334 aa10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 BRD7Q9NPI1 651 aa10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 SNX11Q9Y5W9 270 aa10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 IFRD1O00458 451 aaPredicted RBP10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 PPM1BO75688 479 aa10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 HLA-EP13747 358 aa10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 ATF6P18850 670 aa10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 SUOXP51687 545 aa10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 KCNJ10P78508 379 aa10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 SEMG2Q02383 582 aa10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 BCL2L1Q07817 233 aa10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 GNA13Q14344 377 aa10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 FAM187BQ17R55 369 aa10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 BHLHB9Q6PI77 547 aa10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 C17orf107Q6ZR85 190 aa10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 KRT74Q7RTS7 529 aa10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 C7orf34Q96L11 122 aa10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 SPNS1Q9H2V7 528 aa10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 ATP13A1Q9HD20 1204 aa10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 TLR8Q9NR97 1041 aaKnown RBP10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 TXNL4BQ9NX01 149 aaKnown RBP10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 KLF2Q9Y5W3 355 aaPredicted RBP10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 TCRBV16S1A1N1A0A5B0 115 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 DVL2O14641 736 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 TAPBPO15533 448 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 SUV39H1O43463 412 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 PCDH7O60245 1069 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 CCNB2O95067 398 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 PDYNP01213 254 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 PKMP14618 531 aaKnown RBP10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 GABRB1P18505 474 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 MC4RP32245 332 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 CLDN8P56748 225 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 ERVFC1P60507 584 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 KCNC3Q14003 757 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 SV2CQ496J9 727 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 IGSF11Q5DX21 431 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 PLAG1Q6DJT9 500 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 IL20RBQ6UXL0 311 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 KRT73Q86Y46 540 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 ZNF655Q8N720 491 aaPredicted RBP10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 OR11H7Q8NGC8 314 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 MYEOVQ96EZ4 313 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 C1orf74Q96LT6 269 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 BOCQ9BWV1 1114 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 SERHL2Q9H4I8 314 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 RBFOX1Q9NWB1 397 aaKnown RBP10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 TMEM45AQ9NWC5 275 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 WWOXQ9NZC7 414 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 NDUFAF4Q9P032 175 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 EXO1Q9UQ84 846 aaKnown RBP10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 PIPSLA2A3N6 862 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 PRAMEF25A6NGN4 478 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 TPST2O60704 377 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 ZNF254O75437 659 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 B3GALNT1O75752 331 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 PEPDP12955 493 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 GJA1P17302 382 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 RGRP47804 291 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 AIF1P55008 147 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 ITGA1P56199 1179 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 ERVK-21P61565 698 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 CSNK2BP67870 215 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 IQCCQ4KMZ1 466 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 DDI2Q5TDH0 399 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 USP30Q70CQ3 517 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 ZNF367Q7RTV3 350 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 DGLUCYQ7Z3D6 616 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 KIAA0907Q7Z7F0 614 aaPredicted RBP10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 GPAT4Q86UL3 456 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 IQCF1Q8N6M8 205 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 RTL3Q8N8U3 475 aaKnown RBP10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 LPPQ93052 612 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 HYLS1Q96M11 299 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 MROH8Q9H579 483 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 NMUR1Q9HB89 426 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 FAM8A1Q9UBU6 413 aa10.82□□□□□ -0.68
SEC61A1-202ENST00000424880 SSR3Q9UNL2 185 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms