RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 A8MUA0 341 aa10.32□□□□□ -0.76
SSBP3-206ENST00000420121 CYR61O00622 381 aa10.32□□□□□ -0.76
SSBP3-206ENST00000420121 ZG16O60844 167 aa10.32□□□□□ -0.76
SSBP3-206ENST00000420121 H2AFYO75367 372 aaKnown RBP10.32□□□□□ -0.76
SSBP3-206ENST00000420121 TFEBP19484 476 aa10.32□□□□□ -0.76
SSBP3-206ENST00000420121 CERS1P27544 350 aa10.32□□□□□ -0.76
SSBP3-206ENST00000420121 TPP2P29144 1249 aaPredicted RBP10.32□□□□□ -0.76
SSBP3-206ENST00000420121 PPP2R1BP30154 601 aa10.32□□□□□ -0.76
SSBP3-206ENST00000420121 DCTP40126 519 aa10.32□□□□□ -0.76
SSBP3-206ENST00000420121 CASP2P42575 452 aa10.32□□□□□ -0.76
SSBP3-206ENST00000420121 RAB38P57729 211 aa10.32□□□□□ -0.76
SSBP3-206ENST00000420121 MLF1P58340 268 aa10.32□□□□□ -0.76
SSBP3-206ENST00000420121 IRF9Q00978 393 aa10.32□□□□□ -0.76
SSBP3-206ENST00000420121 SLC7A5Q01650 507 aa10.32□□□□□ -0.76
SSBP3-206ENST00000420121 PCDH1Q08174 1060 aa10.32□□□□□ -0.76
SSBP3-206ENST00000420121 ZRSR2Q15696 482 aaKnown RBP10.32□□□□□ -0.76
SSBP3-206ENST00000420121 PDK4Q16654 411 aa10.32□□□□□ -0.76
SSBP3-206ENST00000420121 C1QL3Q5VWW1 255 aa10.32□□□□□ -0.76
SSBP3-206ENST00000420121 ABHD17CQ6PCB6 329 aa10.32□□□□□ -0.76
SSBP3-206ENST00000420121 GFRALQ6UXV0 394 aa10.32□□□□□ -0.76
SSBP3-206ENST00000420121 ZNF793Q6ZN11 406 aa10.32□□□□□ -0.76
SSBP3-206ENST00000420121 FJX1Q86VR8 437 aa10.32□□□□□ -0.76
SSBP3-206ENST00000420121 RPS19BP1Q86WX3 136 aaKnown RBP10.32□□□□□ -0.76
SSBP3-206ENST00000420121 SIAH3Q8IW03 269 aa10.32□□□□□ -0.76
SSBP3-206ENST00000420121 CYP4X1Q8N118 509 aa10.32□□□□□ -0.76
SSBP3-206ENST00000420121 KRT78Q8N1N4 520 aa10.32□□□□□ -0.76
SSBP3-206ENST00000420121 SLC5A8Q8N695 610 aa10.32□□□□□ -0.76
SSBP3-206ENST00000420121 SUN3Q8TAQ9 357 aa10.32□□□□□ -0.76
SSBP3-206ENST00000420121 UBTD2Q8WUN7 234 aa10.32□□□□□ -0.76
SSBP3-206ENST00000420121 PTCD3Q96EY7 689 aaKnown RBP10.32□□□□□ -0.76
SSBP3-206ENST00000420121 FRMD6Q96NE9 622 aa10.32□□□□□ -0.76
SSBP3-206ENST00000420121 CSF3RQ99062 836 aa10.32□□□□□ -0.76
SSBP3-206ENST00000420121 UTP23Q9BRU9 249 aaKnown RBP10.32□□□□□ -0.76
SSBP3-206ENST00000420121 LRRC1Q9BTT6 524 aa10.32□□□□□ -0.76
SSBP3-206ENST00000420121 CAPS2Q9BXY5 557 aa10.32□□□□□ -0.76
SSBP3-206ENST00000420121 CD244Q9BZW8 370 aa10.32□□□□□ -0.76
SSBP3-206ENST00000420121 ALG9Q9H6U8 611 aa10.32□□□□□ -0.76
SSBP3-206ENST00000420121 CNOT10Q9H9A5 744 aaKnown RBP10.32□□□□□ -0.76
SSBP3-206ENST00000420121 KLHL1Q9NR64 748 aa10.32□□□□□ -0.76
SSBP3-206ENST00000420121 CD274Q9NZQ7 290 aa10.32□□□□□ -0.76
SSBP3-206ENST00000420121 TXNDC16Q9P2K2 825 aa10.32□□□□□ -0.76
SSBP3-206ENST00000420121 RNF112Q9ULX5 631 aa10.32□□□□□ -0.76
SSBP3-206ENST00000420121 TMEM200CA6NKL6 621 aa10.31□□□□□ -0.76
SSBP3-206ENST00000420121 UBXN8O00124 270 aa10.31□□□□□ -0.76
SSBP3-206ENST00000420121 PSMD12O00232 456 aaPredicted RBP10.31□□□□□ -0.76
SSBP3-206ENST00000420121 CLGNO14967 610 aa10.31□□□□□ -0.76
SSBP3-206ENST00000420121 PRKNO60260 465 aaPredicted RBP10.31□□□□□ -0.76
SSBP3-206ENST00000420121 KERAO60938 352 aa10.31□□□□□ -0.76
SSBP3-206ENST00000420121 UNC5CO95185 931 aa10.31□□□□□ -0.76
SSBP3-206ENST00000420121 CRYABP02511 175 aaKnown RBP10.31□□□□□ -0.76
SSBP3-206ENST00000420121 STX2P32856 288 aa10.31□□□□□ -0.76
SSBP3-206ENST00000420121 TRHRP34981 398 aaPredicted RBP10.31□□□□□ -0.76
SSBP3-206ENST00000420121 PLA2G16P53816 162 aa10.31□□□□□ -0.76
SSBP3-206ENST00000420121 LIM2P55344 173 aa10.31□□□□□ -0.76
SSBP3-206ENST00000420121 HSD17B7P56937 341 aa10.31□□□□□ -0.76
SSBP3-206ENST00000420121 CHIT1Q13231 466 aa10.31□□□□□ -0.76
SSBP3-206ENST00000420121 NAB1Q13506 487 aa10.31□□□□□ -0.76
SSBP3-206ENST00000420121 BMPR2Q13873 1038 aa10.31□□□□□ -0.76
SSBP3-206ENST00000420121 SLMAPQ14BN4 828 aa10.31□□□□□ -0.76
SSBP3-206ENST00000420121 TERF2Q15554 542 aa10.31□□□□□ -0.76
SSBP3-206ENST00000420121 TBCCQ15814 346 aa10.31□□□□□ -0.76
SSBP3-206ENST00000420121 XKR6Q5GH73 641 aa10.31□□□□□ -0.76
SSBP3-206ENST00000420121 RNFT1Q5M7Z0 435 aa10.31□□□□□ -0.76
SSBP3-206ENST00000420121 LRRC70Q7Z2Q7 622 aa10.31□□□□□ -0.76
SSBP3-206ENST00000420121 GALNTL5Q7Z4T8 443 aa10.31□□□□□ -0.76
SSBP3-206ENST00000420121 CHERPQ8IWX8 916 aaKnown RBP10.31□□□□□ -0.76
SSBP3-206ENST00000420121 LAS2Q8IYD9 372 aa10.31□□□□□ -0.76
SSBP3-206ENST00000420121 SNX31Q8N9S9 440 aa10.31□□□□□ -0.76
SSBP3-206ENST00000420121 FAM47BQ8NA70 645 aa10.31□□□□□ -0.76
SSBP3-206ENST00000420121 B3GNT7Q8NFL0 401 aa10.31□□□□□ -0.76
SSBP3-206ENST00000420121 STAG3L4Q8TBR4 150 aa10.31□□□□□ -0.76
SSBP3-206ENST00000420121 ZNF473Q8WTR7 871 aaKnown RBP10.31□□□□□ -0.76
SSBP3-206ENST00000420121 CCT6BQ92526 530 aa10.31□□□□□ -0.76
SSBP3-206ENST00000420121 EXT2Q93063 718 aa10.31□□□□□ -0.76
SSBP3-206ENST00000420121 NXNL1Q96CM4 212 aa10.31□□□□□ -0.76
SSBP3-206ENST00000420121 GPR78Q96P69 363 aa10.31□□□□□ -0.76
SSBP3-206ENST00000420121 F2RL3Q96RI0 385 aa10.31□□□□□ -0.76
SSBP3-206ENST00000420121 SERINC2Q96SA4 455 aa10.31□□□□□ -0.76
SSBP3-206ENST00000420121 EFCAB11Q9BUY7 163 aa10.31□□□□□ -0.76
SSBP3-206ENST00000420121 MS4A8Q9BY19 250 aa10.31□□□□□ -0.76
SSBP3-206ENST00000420121 REXO4Q9GZR2 422 aaKnown RBP10.31□□□□□ -0.76
SSBP3-206ENST00000420121 PRTFDC1Q9NRG1 225 aa10.31□□□□□ -0.76
SSBP3-206ENST00000420121 NUDT4Q9NZJ9 180 aa10.31□□□□□ -0.76
SSBP3-206ENST00000420121 KCMF1Q9P0J7 381 aa10.31□□□□□ -0.76
SSBP3-206ENST00000420121 SEC14L3Q9UDX4 400 aa10.31□□□□□ -0.76
SSBP3-206ENST00000420121 DAPP1Q9UN19 280 aa10.31□□□□□ -0.76
SSBP3-206ENST00000420121 CACNA1CQ13936 2221 aa10.31□□□□□ -0.76
SSBP3-206ENST00000420121 FBN2P35556 2912 aa10.3□□□□□ -0.76
SSBP3-206ENST00000420121 ABCA12Q86UK0 2595 aa10.3□□□□□ -0.76
SSBP3-206ENST00000420121 A0A1B0GUH1 482 aa10.3□□□□□ -0.76
SSBP3-206ENST00000420121 ANKDD1BA6NHY2 528 aa10.3□□□□□ -0.76
SSBP3-206ENST00000420121 CDK2AP1O14519 115 aa10.3□□□□□ -0.76
SSBP3-206ENST00000420121 B3GALT2O43825 422 aa10.3□□□□□ -0.76
SSBP3-206ENST00000420121 NME2P1O60361 137 aa10.3□□□□□ -0.76
SSBP3-206ENST00000420121 CCNT2O60583 730 aaKnown RBP10.3□□□□□ -0.76
SSBP3-206ENST00000420121 MYO1DO94832 1006 aa10.3□□□□□ -0.76
SSBP3-206ENST00000420121 C2P06681 752 aa10.3□□□□□ -0.76
SSBP3-206ENST00000420121 SP1P08047 785 aa10.3□□□□□ -0.76
SSBP3-206ENST00000420121 LTA4HP09960 611 aaKnown RBP10.3□□□□□ -0.76
SSBP3-206ENST00000420121 NME2P22392 152 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms