RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 PLPP5Q8NEB5 264 aa17.58■□□□□ 0.4
PTCD3-204ENST00000418628 OR6Y1Q8NGX8 325 aa17.58■□□□□ 0.4
PTCD3-204ENST00000418628 TBC1D20Q96BZ9 403 aa17.58■□□□□ 0.4
PTCD3-204ENST00000418628 ROGDIQ9GZN7 287 aa17.58■□□□□ 0.4
PTCD3-204ENST00000418628 DAPP1Q9UN19 280 aa17.58■□□□□ 0.4
PTCD3-204ENST00000418628 CLDN16Q9Y5I7 305 aa17.58■□□□□ 0.4
PTCD3-204ENST00000418628 IGKV3D-11A0A0A0MRZ8 115 aa17.57■□□□□ 0.4
PTCD3-204ENST00000418628 ARGFXA6NJG6 315 aa17.57■□□□□ 0.4
PTCD3-204ENST00000418628 RTCAO00442 366 aaKnown RBP17.57■□□□□ 0.4
PTCD3-204ENST00000418628 B3GALT2O43825 422 aa17.57■□□□□ 0.4
PTCD3-204ENST00000418628 TRIM13O60858 407 aa17.57■□□□□ 0.4
PTCD3-204ENST00000418628 ALOX12BO75342 701 aa17.57■□□□□ 0.4
PTCD3-204ENST00000418628 ENO1P06733 434 aaKnown RBP17.57■□□□□ 0.4
PTCD3-204ENST00000418628 DHRS4L1P0CG22 281 aa17.57■□□□□ 0.4
PTCD3-204ENST00000418628 COX6A1P12074 109 aa17.57■□□□□ 0.4
PTCD3-204ENST00000418628 HIST1H1TP22492 207 aaPredicted RBP17.57■□□□□ 0.4
PTCD3-204ENST00000418628 PTX3P26022 381 aaPredicted RBP17.57■□□□□ 0.4
PTCD3-204ENST00000418628 ALDH3A1P30838 453 aa17.57■□□□□ 0.4
PTCD3-204ENST00000418628 NEK2P51955 445 aa17.57■□□□□ 0.4
PTCD3-204ENST00000418628 EMP2P54851 167 aa17.57■□□□□ 0.4
PTCD3-204ENST00000418628 SOX8P57073 446 aa17.57■□□□□ 0.4
PTCD3-204ENST00000418628 RAB38P57729 211 aa17.57■□□□□ 0.4
PTCD3-204ENST00000418628 QSOX2Q6ZRP7 698 aa17.57■□□□□ 0.4
PTCD3-204ENST00000418628 ZCCHC7Q8N3Z6 543 aaKnown RBP17.57■□□□□ 0.4
PTCD3-204ENST00000418628 CCDC63Q8NA47 563 aa17.57■□□□□ 0.4
PTCD3-204ENST00000418628 ADAMTS18Q8TE60 1221 aa17.57■□□□□ 0.4
PTCD3-204ENST00000418628 TLCD1Q96CP7 247 aa17.57■□□□□ 0.4
PTCD3-204ENST00000418628 FAR2Q96K12 515 aa17.57■□□□□ 0.4
PTCD3-204ENST00000418628 GATA5Q9BWX5 397 aaPredicted RBP17.57■□□□□ 0.4
PTCD3-204ENST00000418628 RBCK1Q9BYM8 510 aa17.57■□□□□ 0.4
PTCD3-204ENST00000418628 ING2Q9H160 280 aa17.57■□□□□ 0.4
PTCD3-204ENST00000418628 BRF2Q9HAW0 419 aa17.57■□□□□ 0.4
PTCD3-204ENST00000418628 LYRM4Q9HD34 91 aa17.57■□□□□ 0.4
PTCD3-204ENST00000418628 TNFRSF12AQ9NP84 129 aa17.57■□□□□ 0.4
PTCD3-204ENST00000418628 FARSBQ9NSD9 589 aaKnown RBP17.57■□□□□ 0.4
PTCD3-204ENST00000418628 KCMF1Q9P0J7 381 aa17.57■□□□□ 0.4
PTCD3-204ENST00000418628 MKL2Q9ULH7 1088 aa17.57■□□□□ 0.4
PTCD3-204ENST00000418628 SERTM1A2A2V5 107 aa17.56■□□□□ 0.4
PTCD3-204ENST00000418628 H3BQF6 201 aa17.56■□□□□ 0.4
PTCD3-204ENST00000418628 CYR61O00622 381 aa17.56■□□□□ 0.4
PTCD3-204ENST00000418628 DNAJB5O75953 348 aa17.56■□□□□ 0.4
PTCD3-204ENST00000418628 PDYNP01213 254 aa17.56■□□□□ 0.4
PTCD3-204ENST00000418628 FAM87AP0C7U9 286 aa17.56■□□□□ 0.4
PTCD3-204ENST00000418628 ACPPP15309 386 aa17.56■□□□□ 0.4
PTCD3-204ENST00000418628 JAK1P23458 1154 aa17.56■□□□□ 0.4
PTCD3-204ENST00000418628 BSGP35613 385 aa17.56■□□□□ 0.4
PTCD3-204ENST00000418628 ARL1P40616 181 aaPredicted RBP17.56■□□□□ 0.4
PTCD3-204ENST00000418628 RRADP55042 308 aa17.56■□□□□ 0.4
PTCD3-204ENST00000418628 LIM2P55344 173 aa17.56■□□□□ 0.4
PTCD3-204ENST00000418628 ZNF33BQ06732 778 aa17.56■□□□□ 0.4
PTCD3-204ENST00000418628 IFT88Q13099 833 aa17.56■□□□□ 0.4
PTCD3-204ENST00000418628 CHAF1BQ13112 559 aa17.56■□□□□ 0.4
PTCD3-204ENST00000418628 MPP2Q14168 576 aa17.56■□□□□ 0.4
PTCD3-204ENST00000418628 TCHHL1Q5QJ38 904 aaPredicted RBP17.56■□□□□ 0.4
PTCD3-204ENST00000418628 MRM1Q6IN84 353 aaKnown RBP17.56■□□□□ 0.4
PTCD3-204ENST00000418628 SCUBE1Q8IWY4 988 aa17.56■□□□□ 0.4
PTCD3-204ENST00000418628 CCNYL1Q8N7R7 359 aa17.56■□□□□ 0.4
PTCD3-204ENST00000418628 CDYL2Q8N8U2 506 aa17.56■□□□□ 0.4
PTCD3-204ENST00000418628 ACOT4Q8N9L9 421 aa17.56■□□□□ 0.4
PTCD3-204ENST00000418628 RGMAQ96B86 450 aa17.56■□□□□ 0.4
PTCD3-204ENST00000418628 SERPINI1Q99574 410 aa17.56■□□□□ 0.4
PTCD3-204ENST00000418628 MECRQ9BV79 373 aa17.56■□□□□ 0.4
PTCD3-204ENST00000418628 YIPF2Q9BWQ6 316 aa17.56■□□□□ 0.4
PTCD3-204ENST00000418628 TMBIM4Q9HC24 238 aa17.56■□□□□ 0.4
PTCD3-204ENST00000418628 MLXIPLQ9NP71 852 aa17.56■□□□□ 0.4
PTCD3-204ENST00000418628 FBXL4Q9UKA2 621 aa17.56■□□□□ 0.4
PTCD3-204ENST00000418628 SNX6Q9UNH7 406 aa17.56■□□□□ 0.4
PTCD3-204ENST00000418628 EXPH5Q8NEV8 1989 aa17.56■□□□□ 0.4
PTCD3-204ENST00000418628 IGHV1-45A0A0A0MS14 117 aa17.55■□□□□ 0.4
PTCD3-204ENST00000418628 A0A0A6YYD5 115 aa17.55■□□□□ 0.4
PTCD3-204ENST00000418628 OR2W5A6NFC9 320 aa17.55■□□□□ 0.4
PTCD3-204ENST00000418628 MANBAO00462 879 aa17.55■□□□□ 0.4
PTCD3-204ENST00000418628 TM9SF1O15321 606 aa17.55■□□□□ 0.4
PTCD3-204ENST00000418628 SH3BGRLO75368 114 aa17.55■□□□□ 0.4
PTCD3-204ENST00000418628 HEXBP07686 556 aa17.55■□□□□ 0.4
PTCD3-204ENST00000418628 C8orf89P0DMQ9 161 aa17.55■□□□□ 0.4
PTCD3-204ENST00000418628 HSD3B1P14060 373 aa17.55■□□□□ 0.4
PTCD3-204ENST00000418628 HSD3B2P26439 372 aa17.55■□□□□ 0.4
PTCD3-204ENST00000418628 HTR6P50406 440 aa17.55■□□□□ 0.4
PTCD3-204ENST00000418628 HNRNPFP52597 415 aaKnown RBP17.55■□□□□ 0.4
PTCD3-204ENST00000418628 FOXA1P55317 472 aa17.55■□□□□ 0.4
PTCD3-204ENST00000418628 GALNT1Q10472 559 aaPredicted RBP17.55■□□□□ 0.4
PTCD3-204ENST00000418628 PCOLCEQ15113 449 aa17.55■□□□□ 0.4
PTCD3-204ENST00000418628 SOWAHCQ53LP3 525 aaPredicted RBP17.55■□□□□ 0.4
PTCD3-204ENST00000418628 OR4C11Q6IEV9 310 aa17.55■□□□□ 0.4
PTCD3-204ENST00000418628 LANCL3Q6ZV70 420 aa17.55■□□□□ 0.4
PTCD3-204ENST00000418628 TMEM52Q8NDY8 209 aa17.55■□□□□ 0.4
PTCD3-204ENST00000418628 TSLPQ969D9 159 aa17.55■□□□□ 0.4
PTCD3-204ENST00000418628 C8orf44Q96CB5 159 aa17.55■□□□□ 0.4
PTCD3-204ENST00000418628 FER1L6-AS2Q96M78 137 aa17.55■□□□□ 0.4
PTCD3-204ENST00000418628 KCNA7Q96RP8 456 aa17.55■□□□□ 0.4
PTCD3-204ENST00000418628 CSF3RQ99062 836 aa17.55■□□□□ 0.4
PTCD3-204ENST00000418628 WDR77Q9BQA1 342 aaPredicted RBP17.55■□□□□ 0.4
PTCD3-204ENST00000418628 TRMOQ9BU70 441 aa17.55■□□□□ 0.4
PTCD3-204ENST00000418628 SORBS1Q9BX66 1292 aaKnown RBP17.55■□□□□ 0.4
PTCD3-204ENST00000418628 SEMA4CQ9C0C4 833 aa17.55■□□□□ 0.4
PTCD3-204ENST00000418628 ELOVL6Q9H5J4 265 aa17.55■□□□□ 0.4
PTCD3-204ENST00000418628 DDX31Q9H8H2 851 aaKnown RBP17.55■□□□□ 0.4
PTCD3-204ENST00000418628 COPS7BQ9H9Q2 264 aaPredicted RBP17.55■□□□□ 0.4
PTCD3-204ENST00000418628 MID1IP1Q9NPA3 183 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms