RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 MAPKAP1Q9BPZ7 522 aa11.2□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 SLIRPQ9GZT3 109 aaKnown RBP11.2□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 SPATA7Q9P0W8 599 aa11.2□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 NFKBIL1Q9UBC1 381 aaPredicted RBP11.2□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 RHCGQ9UBD6 479 aa11.2□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 DKK3Q9UBP4 350 aa11.2□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 PNMA8CA0A1B0GUJ8 204 aa11.2□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 EFCAB10A6NFE3 127 aa11.2□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 ALOX12P18054 663 aa11.2□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 CD40LGP29965 261 aa11.2□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 MAPK12P53778 367 aa11.2□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 FNDC3BQ53EP0 1204 aaKnown RBP11.2□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 TMEM215Q68D42 235 aa11.2□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 TNFAIP8L2Q6P589 184 aaPredicted RBP11.2□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 PARS2Q7L3T8 475 aaKnown RBP11.2□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 C17orf64Q86WR6 236 aa11.2□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 SLC30A8Q8IWU4 369 aa11.2□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 NUS1Q96E22 293 aa11.2□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 MTERF3Q96E29 417 aa11.2□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 NUAK2Q9H093 628 aa11.2□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 TMEM38AQ9H6F2 299 aa11.2□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 MYNNQ9NPC7 610 aa11.2□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 PLCXD1Q9NUJ7 323 aa11.2□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 MYOFQ9NZM1 2061 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 J3KTA2 159 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 AXIN1O15169 862 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 TNFRSF21O75509 655 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 APOA1P02647 267 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 CTSLP07711 333 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 PIK3CBP42338 1070 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 DEFA1P59665 94 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 DEFA3P59666 94 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 TAP2Q03519 686 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 KCNC4Q03721 635 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 IQCCQ4KMZ1 466 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 TPRG1LQ5T0D9 272 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 REEP3Q6NUK4 255 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 LILRA6Q6PI73 481 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 C9orf43Q8TAL5 461 aaPredicted RBP11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 DTD2Q96FN9 168 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 ENPP4Q9Y6X5 453 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 NRG2O14511 850 aaPredicted RBP11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 TLL1O43897 1013 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 OR10H3O60404 316 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 LILRB3O75022 631 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 SERPIND1P05546 499 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 RHCEP18577 417 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 CASP12Q6UXS9 341 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 UNC5DQ6UXZ4 953 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 ADCK2Q7Z695 626 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 HEATR4Q86WZ0 1026 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 MFSD4AQ8N468 514 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 WDR36Q8NI36 951 aaKnown RBP11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 OTUB2Q96DC9 234 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 ERLEC1Q96DZ1 483 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 CHST8Q9H2A9 424 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 THSD1Q9NS62 852 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 TMEM184CQ9NVA4 438 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 M0R129 80 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 PSMD11O00231 422 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 PCDH17O14917 1159 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 CLTBP09497 229 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 CXCR2P25025 360 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 KRR1Q13601 381 aaKnown RBP11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 EIF4HQ15056 248 aaKnown RBP11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 FAM180BQ6P0A1 224 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 GPR155Q7Z3F1 870 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 ING5Q8WYH8 240 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 VOPP1Q96AW1 172 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 SAMD11Q96NU1 681 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 SLC6A16Q9GZN6 736 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 EPHX3Q9H6B9 360 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 C1GALT1Q9NS00 363 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 OSGIN1Q9UJX0 560 aa11.19□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 PLXNA4Q9HCM2 1894 aa11.18□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 CCL5P13501 91 aa11.18□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 UQCRC2P22695 453 aa11.18□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 ACVR2AP27037 513 aa11.18□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 DGKEP52429 567 aa11.18□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 CRYBA2P53672 197 aa11.18□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.18□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 HEPACAMQ14CZ8 416 aa11.18□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 PTGES3Q15185 160 aaKnown RBP11.18□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 TRIM69Q86WT6 500 aa11.18□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 CCDC103Q8IW40 242 aa11.18□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 METTL4Q8N3J2 472 aa11.18□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 ZNF740Q8NDX6 193 aa11.18□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 OR9Q1Q8NGQ5 310 aa11.18□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 GOT1L1Q8NHS2 421 aaPredicted RBP11.18□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 OR8D1Q8WZ84 308 aa11.18□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 Q96MT0 163 aa11.18□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 QRFPRQ96P65 431 aa11.18□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 AIF1LQ9BQI0 150 aa11.18□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 TMEM121BQ9BXQ6 578 aaPredicted RBP11.18□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 ALOXE3Q9BYJ1 711 aa11.18□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 ISPDA4D126 451 aa11.18□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 RGS5O15539 181 aa11.18□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 PDE9AO76083 593 aa11.18□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 BCHEP06276 602 aa11.18□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 KELP23276 732 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms