RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 IRX1P78414 480 aaPredicted RBP6.49□□□□□ -1.37
CPS1-202ENST00000417946 SLC14A1Q13336 389 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 PWP1Q13610 501 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 MPEG1Q2M385 716 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 INAVAQ3KP66 663 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 TMEM35AQ53FP2 167 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 AGKQ53H12 422 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 ZNF385BQ569K4 471 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 SPANXN4Q5MJ08 99 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 FAM71E1Q6IPT2 247 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 ARMC6Q6NXE6 501 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 KLHL35Q6PF15 583 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 PRR23CQ6ZRP0 262 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 RINLQ6ZS11 566 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 ARHGAP22Q7Z5H3 698 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 B3GNT8Q7Z7M8 397 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 PIP4P1Q86T03 277 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 MCATQ8IVS2 390 aaKnown RBP6.49□□□□□ -1.37
CPS1-202ENST00000417946 MSRB3Q8IXL7 192 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 CARFQ8N187 725 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 CSNK1A1LQ8N752 337 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 TRPV3Q8NET8 790 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 TTLQ8NG68 377 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 OR2L5Q8NG80 312 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 OR6C4Q8NGE1 309 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 IFI44Q8TCB0 444 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 RHBDD1Q8TEB9 315 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 C16orf78Q8WTQ4 265 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 SLC13A3Q8WWT9 602 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 EDARADDQ8WWZ3 215 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 NAT6Q93015 286 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 UCN3Q969E3 161 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 UTP4Q969X6 686 aaKnown RBP6.49□□□□□ -1.37
CPS1-202ENST00000417946 GAL3ST3Q96A11 431 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 VPS33AQ96AX1 596 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 RCN3Q96D15 328 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 TCTN2Q96GX1 697 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 NSL1Q96IY1 281 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 CNDP2Q96KP4 475 aaKnown RBP6.49□□□□□ -1.37
CPS1-202ENST00000417946 C17orf62Q9BQA9 187 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 TRIM4Q9C037 500 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 LRMDAQ9H2I8 198 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 LRRN3Q9H3W5 708 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 SERHLQ9NQF3 203 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 PFDN4Q9NQP4 134 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 STARD5Q9NSY2 213 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 TMEM45AQ9NWC5 275 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 TEX10Q9NXF1 929 aaPredicted RBP6.49□□□□□ -1.37
CPS1-202ENST00000417946 NCDNQ9UBB6 729 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 KLHL3Q9UH77 587 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 ADAM29Q9UKF5 820 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 ASB4Q9Y574 426 aa6.49□□□□□ -1.37
CPS1-202ENST00000417946 ZFHX2Q9C0A1 2572 aaPredicted RBP6.48□□□□□ -1.37
CPS1-202ENST00000417946 TRBV5-3A0A0A0MS03 114 aa6.48□□□□□ -1.37
CPS1-202ENST00000417946 IGHV5-10-1A0A0J9YXX1 117 aa6.48□□□□□ -1.37
CPS1-202ENST00000417946 LOC100653049A0A140TA62 436 aa6.48□□□□□ -1.37
CPS1-202ENST00000417946 ANKRD65E5RJM6 399 aa6.48□□□□□ -1.37
CPS1-202ENST00000417946 SCAMP2O15127 329 aaKnown RBP6.48□□□□□ -1.37
CPS1-202ENST00000417946 ERI3O43414 337 aaKnown RBP6.48□□□□□ -1.37
CPS1-202ENST00000417946 FOXS1O43638 330 aa6.48□□□□□ -1.37
CPS1-202ENST00000417946 PRKRAO75569 313 aaKnown RBP6.48□□□□□ -1.37
CPS1-202ENST00000417946 SLC22A3O75751 556 aa6.48□□□□□ -1.37
CPS1-202ENST00000417946 KRT34O76011 436 aa6.48□□□□□ -1.37
CPS1-202ENST00000417946 KIAA0754O94854 1291 aa6.48□□□□□ -1.37
CPS1-202ENST00000417946 LRATO95237 230 aa6.48□□□□□ -1.37
CPS1-202ENST00000417946 ZBTB11O95625 1053 aaPredicted RBP6.48□□□□□ -1.37
CPS1-202ENST00000417946 CPNE6O95741 557 aa6.48□□□□□ -1.37
CPS1-202ENST00000417946 C1QCP02747 245 aa6.48□□□□□ -1.37
CPS1-202ENST00000417946 KLK1P06870 262 aa6.48□□□□□ -1.37
CPS1-202ENST00000417946 SNRPB2P08579 225 aaKnown RBP6.48□□□□□ -1.37
CPS1-202ENST00000417946 IL3P08700 152 aa6.48□□□□□ -1.37
CPS1-202ENST00000417946 ANXA4P09525 319 aaPredicted RBP6.48□□□□□ -1.37
CPS1-202ENST00000417946 FURINP09958 794 aa6.48□□□□□ -1.37
CPS1-202ENST00000417946 MSL3P1P0C860 447 aa6.48□□□□□ -1.37
CPS1-202ENST00000417946 FOLR1P15328 257 aa6.48□□□□□ -1.37
CPS1-202ENST00000417946 CKMT2P17540 419 aa6.48□□□□□ -1.37
CPS1-202ENST00000417946 NELFEP18615 380 aaKnown RBP6.48□□□□□ -1.37
CPS1-202ENST00000417946 HIST1H1TP22492 207 aaPredicted RBP6.48□□□□□ -1.37
CPS1-202ENST00000417946 GRK3P35626 688 aa6.48□□□□□ -1.37
CPS1-202ENST00000417946 POLR2JP52435 117 aaKnown RBP6.48□□□□□ -1.37
CPS1-202ENST00000417946 ARFIP1P53367 373 aa6.48□□□□□ -1.37
CPS1-202ENST00000417946 PLA2G16P53816 162 aa6.48□□□□□ -1.37
CPS1-202ENST00000417946 VSX2P58304 361 aaPredicted RBP6.48□□□□□ -1.37
CPS1-202ENST00000417946 RAB8AP61006 207 aa6.48□□□□□ -1.37
CPS1-202ENST00000417946 PHEXP78562 749 aa6.48□□□□□ -1.37
CPS1-202ENST00000417946 MC1RQ01726 317 aa6.48□□□□□ -1.37
CPS1-202ENST00000417946 ZFP36L1Q07352 338 aaKnown RBP6.48□□□□□ -1.37
CPS1-202ENST00000417946 ZNF763Q0D2J5 394 aa6.48□□□□□ -1.37
CPS1-202ENST00000417946 MAD2L1Q13257 205 aaPredicted RBP6.48□□□□□ -1.37
CPS1-202ENST00000417946 RUNX2Q13950 521 aa6.48□□□□□ -1.37
CPS1-202ENST00000417946 GPR19Q15760 415 aa6.48□□□□□ -1.37
CPS1-202ENST00000417946 MUM1Q2TAK8 710 aa6.48□□□□□ -1.37
CPS1-202ENST00000417946 VPS26BQ4G0F5 336 aa6.48□□□□□ -1.37
CPS1-202ENST00000417946 TIGD2Q4W5G0 525 aa6.48□□□□□ -1.37
CPS1-202ENST00000417946 PAGE3Q5JUK9 113 aa6.48□□□□□ -1.37
CPS1-202ENST00000417946 CACHD1Q5VU97 1274 aa6.48□□□□□ -1.37
CPS1-202ENST00000417946 REP15Q6BDI9 236 aa6.48□□□□□ -1.37
CPS1-202ENST00000417946 OR4C11Q6IEV9 310 aa6.48□□□□□ -1.37
CPS1-202ENST00000417946 ANKRD26P1Q6NSI1 321 aa6.48□□□□□ -1.37
CPS1-202ENST00000417946 TMEM71Q6P5X7 295 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms