RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 ZNF33BQ06732 778 aa13.85□□□□□ -0.19
HDAC9-208ENST00000417496 UAP1L1Q3KQV9 507 aa13.85□□□□□ -0.19
HDAC9-208ENST00000417496 LIPIQ6XZB0 460 aa13.85□□□□□ -0.19
HDAC9-208ENST00000417496 TRAPPC5Q8IUR0 188 aa13.85□□□□□ -0.19
HDAC9-208ENST00000417496 CYP4Z2PQ8N1L4 340 aa13.85□□□□□ -0.19
HDAC9-208ENST00000417496 ST13P5Q8NFI4 369 aaPredicted RBP13.85□□□□□ -0.19
HDAC9-208ENST00000417496 FCGR1BQ92637 280 aa13.85□□□□□ -0.19
HDAC9-208ENST00000417496 SPATA9Q9BWV2 254 aa13.85□□□□□ -0.19
HDAC9-208ENST00000417496 SLC6A16Q9GZN6 736 aa13.85□□□□□ -0.19
HDAC9-208ENST00000417496 ZNF556Q9HAH1 456 aa13.85□□□□□ -0.19
HDAC9-208ENST00000417496 C5AR2Q9P296 337 aa13.85□□□□□ -0.19
HDAC9-208ENST00000417496 ATP6V1HQ9UI12 483 aa13.85□□□□□ -0.19
HDAC9-208ENST00000417496 POFUT2Q9Y2G5 429 aa13.85□□□□□ -0.19
HDAC9-208ENST00000417496 IFT52Q9Y366 437 aa13.85□□□□□ -0.19
HDAC9-208ENST00000417496 XIRP2A4UGR9 3374 aa13.85□□□□□ -0.19
HDAC9-208ENST00000417496 TRBC2A0A5B9 178 aa13.85□□□□□ -0.19
HDAC9-208ENST00000417496 RTCAO00442 366 aaKnown RBP13.85□□□□□ -0.19
HDAC9-208ENST00000417496 ZNF197O14709 1029 aa13.85□□□□□ -0.19
HDAC9-208ENST00000417496 GADD45GO95257 159 aa13.85□□□□□ -0.19
HDAC9-208ENST00000417496 RECKO95980 971 aa13.85□□□□□ -0.19
HDAC9-208ENST00000417496 IL3P08700 152 aa13.85□□□□□ -0.19
HDAC9-208ENST00000417496 PCSK2P16519 638 aa13.85□□□□□ -0.19
HDAC9-208ENST00000417496 POLR2EP19388 210 aaKnown RBP13.85□□□□□ -0.19
HDAC9-208ENST00000417496 DCDC1P59894 354 aa13.85□□□□□ -0.19
HDAC9-208ENST00000417496 TUBA1BP68363 451 aa13.85□□□□□ -0.19
HDAC9-208ENST00000417496 EEF1A2Q05639 463 aaKnown RBP13.85□□□□□ -0.19
HDAC9-208ENST00000417496 SELENBP1Q13228 472 aa13.85□□□□□ -0.19
HDAC9-208ENST00000417496 USP43Q70EL4 1123 aa13.85□□□□□ -0.19
HDAC9-208ENST00000417496 TUBA1AQ71U36 451 aa13.85□□□□□ -0.19
HDAC9-208ENST00000417496 TRMT11Q7Z4G4 463 aaKnown RBP13.85□□□□□ -0.19
HDAC9-208ENST00000417496 WDR53Q7Z5U6 358 aaPredicted RBP13.85□□□□□ -0.19
HDAC9-208ENST00000417496 KREMEN2Q8NCW0 462 aa13.85□□□□□ -0.19
HDAC9-208ENST00000417496 VN1R2Q8NFZ6 395 aa13.85□□□□□ -0.19
HDAC9-208ENST00000417496 ITPKCQ96DU7 683 aa13.85□□□□□ -0.19
HDAC9-208ENST00000417496 MRGPRX3Q96LB0 322 aa13.85□□□□□ -0.19
HDAC9-208ENST00000417496 DMRT3Q9NQL9 472 aa13.85□□□□□ -0.19
HDAC9-208ENST00000417496 SPHK2Q9NRA0 654 aa13.85□□□□□ -0.19
HDAC9-208ENST00000417496 A0A1W2PRB8 838 aa13.84□□□□□ -0.19
HDAC9-208ENST00000417496 WASH3PC4AMC7 463 aa13.84□□□□□ -0.19
HDAC9-208ENST00000417496 KPNA3O00505 521 aaPredicted RBP13.84□□□□□ -0.19
HDAC9-208ENST00000417496 FFAR1O14842 300 aa13.84□□□□□ -0.19
HDAC9-208ENST00000417496 GPR37L1O60883 481 aa13.84□□□□□ -0.19
HDAC9-208ENST00000417496 FGF18O76093 207 aa13.84□□□□□ -0.19
HDAC9-208ENST00000417496 KCNK2O95069 426 aa13.84□□□□□ -0.19
HDAC9-208ENST00000417496 SOX14O95416 240 aa13.84□□□□□ -0.19
HDAC9-208ENST00000417496 ALOX12P18054 663 aa13.84□□□□□ -0.19
HDAC9-208ENST00000417496 SERPINB1P30740 379 aa13.84□□□□□ -0.19
HDAC9-208ENST00000417496 CNR2P34972 360 aa13.84□□□□□ -0.19
HDAC9-208ENST00000417496 XCR1P46094 333 aa13.84□□□□□ -0.19
HDAC9-208ENST00000417496 NKX2-5P52952 324 aaPredicted RBP13.84□□□□□ -0.19
HDAC9-208ENST00000417496 TAP2Q03519 686 aa13.84□□□□□ -0.19
HDAC9-208ENST00000417496 LRRC74AQ0VAA2 488 aa13.84□□□□□ -0.19
HDAC9-208ENST00000417496 MESP2Q0VG99 397 aa13.84□□□□□ -0.19
HDAC9-208ENST00000417496 PUM1Q14671 1186 aaKnown RBP eCLIP13.84□□□□□ -0.19
HDAC9-208ENST00000417496 TNFAIP8L2Q6P589 184 aaPredicted RBP13.84□□□□□ -0.19
HDAC9-208ENST00000417496 COL21A1Q96P44 957 aa13.84□□□□□ -0.19
HDAC9-208ENST00000417496 PIP5K1AQ99755 562 aa13.84□□□□□ -0.19
HDAC9-208ENST00000417496 KCNS3Q9BQ31 491 aa13.84□□□□□ -0.19
HDAC9-208ENST00000417496 EHD1Q9H4M9 534 aa13.84□□□□□ -0.19
HDAC9-208ENST00000417496 TAS2R9Q9NYW1 312 aa13.84□□□□□ -0.19
HDAC9-208ENST00000417496 IL36AQ9UHA7 158 aa13.84□□□□□ -0.19
HDAC9-208ENST00000417496 POU2F3Q9UKI9 436 aa13.84□□□□□ -0.19
HDAC9-208ENST00000417496 FAM32AQ9Y421 112 aaKnown RBP13.84□□□□□ -0.19
HDAC9-208ENST00000417496 CXCL14O95715 111 aa13.84□□□□□ -0.19
HDAC9-208ENST00000417496 C1GALT1C1LP0DN25 315 aa13.84□□□□□ -0.19
HDAC9-208ENST00000417496 CHMP24386 653 aa13.84□□□□□ -0.19
HDAC9-208ENST00000417496 UGT2B10P36537 528 aa13.84□□□□□ -0.19
HDAC9-208ENST00000417496 TSTQ16762 297 aaKnown RBP13.84□□□□□ -0.19
HDAC9-208ENST00000417496 MLIPQ5VWP3 458 aa13.84□□□□□ -0.19
HDAC9-208ENST00000417496 BCDIN3DQ7Z5W3 292 aaKnown RBP13.84□□□□□ -0.19
HDAC9-208ENST00000417496 AMER2Q8N7J2 671 aa13.84□□□□□ -0.19
HDAC9-208ENST00000417496 MINDY2Q8NBR6 621 aa13.84□□□□□ -0.19
HDAC9-208ENST00000417496 GOT1L1Q8NHS2 421 aaPredicted RBP13.84□□□□□ -0.19
HDAC9-208ENST00000417496 TIFAQ96CG3 184 aa13.84□□□□□ -0.19
HDAC9-208ENST00000417496 WFDC6Q9BQY6 131 aa13.84□□□□□ -0.19
HDAC9-208ENST00000417496 C11orf16Q9NQ32 467 aa13.84□□□□□ -0.19
HDAC9-208ENST00000417496 HCN4Q9Y3Q4 1203 aa13.84□□□□□ -0.19
HDAC9-208ENST00000417496 PCDHGA4Q9Y5G9 962 aa13.84□□□□□ -0.19
HDAC9-208ENST00000417496 CCDC88CQ9P219 2028 aa13.83□□□□□ -0.19
HDAC9-208ENST00000417496 HELZP42694 1942 aaKnown RBP13.83□□□□□ -0.2
HDAC9-208ENST00000417496 TRBV4-1A0A0J9YWV2 114 aa13.83□□□□□ -0.2
HDAC9-208ENST00000417496 CTDSP2O14595 271 aa13.83□□□□□ -0.2
HDAC9-208ENST00000417496 ZW10O43264 779 aa13.83□□□□□ -0.2
HDAC9-208ENST00000417496 SEMA7AO75326 666 aa13.83□□□□□ -0.2
HDAC9-208ENST00000417496 LIM2P55344 173 aa13.83□□□□□ -0.2
HDAC9-208ENST00000417496 NTHL1P78549 312 aa13.83□□□□□ -0.2
HDAC9-208ENST00000417496 KCNJ8Q15842 424 aa13.83□□□□□ -0.2
HDAC9-208ENST00000417496 ZNF805Q5CZA5 627 aa13.83□□□□□ -0.2
HDAC9-208ENST00000417496 FAM71E1Q6IPT2 247 aa13.83□□□□□ -0.2
HDAC9-208ENST00000417496 TRIM40Q6P9F5 258 aa13.83□□□□□ -0.2
HDAC9-208ENST00000417496 CNKSR3Q6P9H4 555 aa13.83□□□□□ -0.2
HDAC9-208ENST00000417496 PARS2Q7L3T8 475 aaKnown RBP13.83□□□□□ -0.2
HDAC9-208ENST00000417496 SLAIN1Q8ND83 568 aa13.83□□□□□ -0.2
HDAC9-208ENST00000417496 DENND6BQ8NEG7 585 aa13.83□□□□□ -0.2
HDAC9-208ENST00000417496 RAB8BQ92930 207 aa13.83□□□□□ -0.2
HDAC9-208ENST00000417496 METTL2AQ96IZ6 378 aaKnown RBP13.83□□□□□ -0.2
HDAC9-208ENST00000417496 CAPNS2Q96L46 248 aa13.83□□□□□ -0.2
HDAC9-208ENST00000417496 ZSWIM3Q96MP5 696 aa13.83□□□□□ -0.2
HDAC9-208ENST00000417496 RC3H2Q9HBD1 1191 aaKnown RBP13.83□□□□□ -0.2
HDAC9-208ENST00000417496 TDP1Q9NUW8 608 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms