RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 UBE3DQ7Z6J8 389 aa14.12□□□□□ -0.15
UBXN4-203ENST00000416538 LGI4Q8N135 537 aa14.12□□□□□ -0.15
UBXN4-203ENST00000416538 TCAIMQ8N3R3 496 aa14.12□□□□□ -0.15
UBXN4-203ENST00000416538 SLC5A8Q8N695 610 aa14.12□□□□□ -0.15
UBXN4-203ENST00000416538 UTP23Q9BRU9 249 aaKnown RBP14.12□□□□□ -0.15
UBXN4-203ENST00000416538 KRTAP3-3Q9BYR6 98 aa14.12□□□□□ -0.15
UBXN4-203ENST00000416538 KRTAP3-2Q9BYR7 98 aa14.12□□□□□ -0.15
UBXN4-203ENST00000416538 NT5DC2Q9H857 520 aa14.12□□□□□ -0.15
UBXN4-203ENST00000416538 CLK4Q9HAZ1 481 aaKnown RBP14.12□□□□□ -0.15
UBXN4-203ENST00000416538 CD274Q9NZQ7 290 aa14.12□□□□□ -0.15
UBXN4-203ENST00000416538 TXNDC16Q9P2K2 825 aa14.12□□□□□ -0.15
UBXN4-203ENST00000416538 UTP11Q9Y3A2 253 aaKnown RBP14.12□□□□□ -0.15
UBXN4-203ENST00000416538 NCKAP5O14513 1909 aa14.11□□□□□ -0.15
UBXN4-203ENST00000416538 EXPH5Q8NEV8 1989 aa14.11□□□□□ -0.15
UBXN4-203ENST00000416538 URADA6NGE7 173 aa14.11□□□□□ -0.15
UBXN4-203ENST00000416538 PSMD12O00232 456 aaPredicted RBP14.11□□□□□ -0.15
UBXN4-203ENST00000416538 PRKNO60260 465 aaPredicted RBP14.11□□□□□ -0.15
UBXN4-203ENST00000416538 CCNT2O60583 730 aaKnown RBP14.11□□□□□ -0.15
UBXN4-203ENST00000416538 SPRP35270 261 aaPredicted RBP14.11□□□□□ -0.15
UBXN4-203ENST00000416538 RAB38P57729 211 aa14.11□□□□□ -0.15
UBXN4-203ENST00000416538 MLF1P58340 268 aa14.11□□□□□ -0.15
UBXN4-203ENST00000416538 XKR6Q5GH73 641 aa14.11□□□□□ -0.15
UBXN4-203ENST00000416538 RNFT1Q5M7Z0 435 aa14.11□□□□□ -0.15
UBXN4-203ENST00000416538 CDKL4Q5MAI5 379 aa14.11□□□□□ -0.15
UBXN4-203ENST00000416538 GRTP1Q5TC63 336 aa14.11□□□□□ -0.15
UBXN4-203ENST00000416538 ABHD17CQ6PCB6 329 aa14.11□□□□□ -0.15
UBXN4-203ENST00000416538 LRRC70Q7Z2Q7 622 aa14.11□□□□□ -0.15
UBXN4-203ENST00000416538 GALNTL5Q7Z4T8 443 aa14.11□□□□□ -0.15
UBXN4-203ENST00000416538 CLNKQ7Z7G1 428 aa14.11□□□□□ -0.15
UBXN4-203ENST00000416538 RPS19BP1Q86WX3 136 aaKnown RBP14.11□□□□□ -0.15
UBXN4-203ENST00000416538 SIAH3Q8IW03 269 aa14.11□□□□□ -0.15
UBXN4-203ENST00000416538 CHERPQ8IWX8 916 aaKnown RBP14.11□□□□□ -0.15
UBXN4-203ENST00000416538 ARMC10Q8N2F6 343 aa14.11□□□□□ -0.15
UBXN4-203ENST00000416538 RNF175Q8N4F7 328 aa14.11□□□□□ -0.15
UBXN4-203ENST00000416538 OR2L5Q8NG80 312 aa14.11□□□□□ -0.15
UBXN4-203ENST00000416538 UBTD2Q8WUN7 234 aa14.11□□□□□ -0.15
UBXN4-203ENST00000416538 KCTD4Q8WVF5 259 aa14.11□□□□□ -0.15
UBXN4-203ENST00000416538 RELTQ969Z4 430 aa14.11□□□□□ -0.15
UBXN4-203ENST00000416538 NXNL1Q96CM4 212 aa14.11□□□□□ -0.15
UBXN4-203ENST00000416538 F2RL3Q96RI0 385 aa14.11□□□□□ -0.15
UBXN4-203ENST00000416538 LRRC1Q9BTT6 524 aa14.11□□□□□ -0.15
UBXN4-203ENST00000416538 MS4A8Q9BY19 250 aa14.11□□□□□ -0.15
UBXN4-203ENST00000416538 RAB17Q9H0T7 212 aa14.11□□□□□ -0.15
UBXN4-203ENST00000416538 PRDM7Q9NQW5 492 aa14.11□□□□□ -0.15
UBXN4-203ENST00000416538 SEC14L3Q9UDX4 400 aa14.11□□□□□ -0.15
UBXN4-203ENST00000416538 RNF112Q9ULX5 631 aa14.11□□□□□ -0.15
UBXN4-203ENST00000416538 MMACHCQ9Y4U1 282 aa14.11□□□□□ -0.15
UBXN4-203ENST00000416538 PCDHGB6Q9Y5F9 930 aa14.11□□□□□ -0.15
UBXN4-203ENST00000416538 ABCA12Q86UK0 2595 aa14.1□□□□□ -0.15
UBXN4-203ENST00000416538 TRBV11-1A0A0K0K1C0 115 aa14.1□□□□□ -0.15
UBXN4-203ENST00000416538 MYOCOSA0A1B0GUC4 107 aa14.1□□□□□ -0.15
UBXN4-203ENST00000416538 LRRC14BA6NHZ5 514 aa14.1□□□□□ -0.15
UBXN4-203ENST00000416538 RTCAO00442 366 aaKnown RBP14.1□□□□□ -0.15
UBXN4-203ENST00000416538 CYR61O00622 381 aa14.1□□□□□ -0.15
UBXN4-203ENST00000416538 KERAO60938 352 aa14.1□□□□□ -0.15
UBXN4-203ENST00000416538 SH3BGRLO75368 114 aa14.1□□□□□ -0.15
UBXN4-203ENST00000416538 MYO1DO94832 1006 aa14.1□□□□□ -0.15
UBXN4-203ENST00000416538 GSTM2P28161 218 aa14.1□□□□□ -0.15
UBXN4-203ENST00000416538 STX2P32856 288 aa14.1□□□□□ -0.15
UBXN4-203ENST00000416538 GPR143P51810 404 aa14.1□□□□□ -0.15
UBXN4-203ENST00000416538 LIM2P55344 173 aa14.1□□□□□ -0.15
UBXN4-203ENST00000416538 TAS2R50P59544 299 aa14.1□□□□□ -0.15
UBXN4-203ENST00000416538 OC90Q02509 493 aaPredicted RBP14.1□□□□□ -0.15
UBXN4-203ENST00000416538 ILF2Q12905 390 aaKnown RBP14.1□□□□□ -0.15
UBXN4-203ENST00000416538 CHIT1Q13231 466 aa14.1□□□□□ -0.15
UBXN4-203ENST00000416538 C16orf47Q6ZP98 133 aaPredicted RBP14.1□□□□□ -0.15
UBXN4-203ENST00000416538 KRT78Q8N1N4 520 aa14.1□□□□□ -0.15
UBXN4-203ENST00000416538 B3GNT7Q8NFL0 401 aa14.1□□□□□ -0.15
UBXN4-203ENST00000416538 TTLQ8NG68 377 aa14.1□□□□□ -0.15
UBXN4-203ENST00000416538 DNAJB8Q8NHS0 232 aa14.1□□□□□ -0.15
UBXN4-203ENST00000416538 SUN3Q8TAQ9 357 aa14.1□□□□□ -0.15
UBXN4-203ENST00000416538 ZNF473Q8WTR7 871 aaKnown RBP14.1□□□□□ -0.15
UBXN4-203ENST00000416538 THAP3Q8WTV1 239 aaPredicted RBP14.1□□□□□ -0.15
UBXN4-203ENST00000416538 MRRFQ96E11 262 aaKnown RBP14.1□□□□□ -0.15
UBXN4-203ENST00000416538 PTCD3Q96EY7 689 aaKnown RBP14.1□□□□□ -0.15
UBXN4-203ENST00000416538 CD244Q9BZW8 370 aa14.1□□□□□ -0.15
UBXN4-203ENST00000416538 PITHD1Q9GZP4 211 aaPredicted RBP14.1□□□□□ -0.15
UBXN4-203ENST00000416538 REXO4Q9GZR2 422 aaKnown RBP14.1□□□□□ -0.15
UBXN4-203ENST00000416538 CNOT10Q9H9A5 744 aaKnown RBP14.1□□□□□ -0.15
UBXN4-203ENST00000416538 PRTFDC1Q9NRG1 225 aa14.1□□□□□ -0.15
UBXN4-203ENST00000416538 NUDT4Q9NZJ9 180 aa14.1□□□□□ -0.15
UBXN4-203ENST00000416538 LRFN1Q9P244 771 aa14.1□□□□□ -0.15
UBXN4-203ENST00000416538 SH3BGRL2Q9UJC5 107 aa14.1□□□□□ -0.15
UBXN4-203ENST00000416538 DAPP1Q9UN19 280 aa14.1□□□□□ -0.15
UBXN4-203ENST00000416538 PPIEQ9UNP9 301 aaKnown RBP14.1□□□□□ -0.15
UBXN4-203ENST00000416538 SUPT3HB4E1H0 165 aa14.09□□□□□ -0.15
UBXN4-203ENST00000416538 CLGNO14967 610 aa14.09□□□□□ -0.15
UBXN4-203ENST00000416538 B3GALT2O43825 422 aa14.09□□□□□ -0.15
UBXN4-203ENST00000416538 NME2P1O60361 137 aa14.09□□□□□ -0.15
UBXN4-203ENST00000416538 H2AFYO75367 372 aaKnown RBP14.09□□□□□ -0.15
UBXN4-203ENST00000416538 SUPT3HO75486 399 aa14.09□□□□□ -0.15
UBXN4-203ENST00000416538 SLC25A12O75746 678 aa14.09□□□□□ -0.15
UBXN4-203ENST00000416538 CRYABP02511 175 aaKnown RBP14.09□□□□□ -0.15
UBXN4-203ENST00000416538 SP1P08047 785 aa14.09□□□□□ -0.15
UBXN4-203ENST00000416538 NME2P22392 152 aa14.09□□□□□ -0.15
UBXN4-203ENST00000416538 CA7P43166 264 aa14.09□□□□□ -0.15
UBXN4-203ENST00000416538 MSH2P43246 934 aa14.09□□□□□ -0.15
UBXN4-203ENST00000416538 HSF1Q00613 529 aa14.09□□□□□ -0.15
UBXN4-203ENST00000416538 CAV1Q03135 178 aa14.09□□□□□ -0.15
UBXN4-203ENST00000416538 TRIM40Q6P9F5 258 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms