RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 GABRR2P28476 465 aa17.23■□□□□ 0.35
SCARB1-203ENST00000415380 CNR2P34972 360 aa17.23■□□□□ 0.35
SCARB1-203ENST00000415380 ETV3P41162 512 aa17.23■□□□□ 0.35
SCARB1-203ENST00000415380 DGKEP52429 567 aa17.23■□□□□ 0.35
SCARB1-203ENST00000415380 SLC5A12Q1EHB4 618 aa17.23■□□□□ 0.35
SCARB1-203ENST00000415380 COMMD6Q7Z4G1 85 aa17.23■□□□□ 0.35
SCARB1-203ENST00000415380 TAPBPLQ9BX59 468 aa17.23■□□□□ 0.35
SCARB1-203ENST00000415380 NEK6Q9HC98 313 aa17.23■□□□□ 0.35
SCARB1-203ENST00000415380 CLN6Q9NWW5 311 aa17.23■□□□□ 0.35
SCARB1-203ENST00000415380 OBSL1O75147 1896 aa17.23■□□□□ 0.35
SCARB1-203ENST00000415380 CCNKO75909 580 aa17.23■□□□□ 0.35
SCARB1-203ENST00000415380 FURINP09958 794 aa17.23■□□□□ 0.35
SCARB1-203ENST00000415380 CTSCP53634 463 aa17.23■□□□□ 0.35
SCARB1-203ENST00000415380 RAB33AQ14088 237 aa17.23■□□□□ 0.35
SCARB1-203ENST00000415380 AGAP6Q5VW22 663 aa17.23■□□□□ 0.35
SCARB1-203ENST00000415380 PLAG1Q6DJT9 500 aa17.23■□□□□ 0.35
SCARB1-203ENST00000415380 TRIM40Q6P9F5 258 aa17.23■□□□□ 0.35
SCARB1-203ENST00000415380 GDPD4Q6W3E5 623 aa17.23■□□□□ 0.35
SCARB1-203ENST00000415380 ARMCX6Q7L4S7 300 aa17.23■□□□□ 0.35
SCARB1-203ENST00000415380 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.23■□□□□ 0.35
SCARB1-203ENST00000415380 CEP19Q96LK0 163 aa17.23■□□□□ 0.35
SCARB1-203ENST00000415380 AGAP4Q96P64 663 aa17.23■□□□□ 0.35
SCARB1-203ENST00000415380 SLC30A2Q9BRI3 323 aa17.23■□□□□ 0.35
SCARB1-203ENST00000415380 TP63Q9H3D4 680 aaPredicted RBP17.23■□□□□ 0.35
SCARB1-203ENST00000415380 ENPP4Q9Y6X5 453 aa17.23■□□□□ 0.35
SCARB1-203ENST00000415380 ALPK3Q96L96 1907 aa17.23■□□□□ 0.35
SCARB1-203ENST00000415380 GPR37L1O60883 481 aa17.22■□□□□ 0.35
SCARB1-203ENST00000415380 S100A1P23297 94 aa17.22■□□□□ 0.35
SCARB1-203ENST00000415380 CHI3L1P36222 383 aaPredicted RBP17.22■□□□□ 0.35
SCARB1-203ENST00000415380 TM4SF4P48230 202 aa17.22■□□□□ 0.35
SCARB1-203ENST00000415380 CRISP1P54107 249 aa17.22■□□□□ 0.35
SCARB1-203ENST00000415380 RSBN1Q5VWQ0 802 aaPredicted RBP17.22■□□□□ 0.35
SCARB1-203ENST00000415380 GAREM2Q75VX8 874 aa17.22■□□□□ 0.35
SCARB1-203ENST00000415380 PPCDCQ96CD2 204 aa17.22■□□□□ 0.35
SCARB1-203ENST00000415380 SCLYQ96I15 445 aa17.22■□□□□ 0.35
SCARB1-203ENST00000415380 TRNT1Q96Q11 434 aaKnown RBP17.22■□□□□ 0.35
SCARB1-203ENST00000415380 VPS35Q96QK1 796 aa17.22■□□□□ 0.35
SCARB1-203ENST00000415380 RIOK2Q9BVS4 552 aaKnown RBP17.22■□□□□ 0.35
SCARB1-203ENST00000415380 NMNAT1Q9HAN9 279 aaPredicted RBP17.22■□□□□ 0.35
SCARB1-203ENST00000415380 RAB23Q9ULC3 237 aa17.22■□□□□ 0.35
SCARB1-203ENST00000415380 KCNE2Q9Y6J6 123 aa17.22■□□□□ 0.35
SCARB1-203ENST00000415380 KIAA1671Q9BY89 1806 aa17.22■□□□□ 0.35
SCARB1-203ENST00000415380 TRBC2A0A5B9 178 aa17.22■□□□□ 0.35
SCARB1-203ENST00000415380 PDZK1P1A8MUH7 402 aa17.22■□□□□ 0.35
SCARB1-203ENST00000415380 RECKO95980 971 aa17.22■□□□□ 0.35
SCARB1-203ENST00000415380 POU1F1P28069 291 aa17.22■□□□□ 0.35
SCARB1-203ENST00000415380 SLC15A1P46059 708 aa17.22■□□□□ 0.35
SCARB1-203ENST00000415380 PCBP3P57721 371 aaKnown RBP17.22■□□□□ 0.35
SCARB1-203ENST00000415380 COPZ1P61923 177 aa17.22■□□□□ 0.35
SCARB1-203ENST00000415380 POLR2LP62875 67 aaKnown RBP17.22■□□□□ 0.35
SCARB1-203ENST00000415380 C2orf80Q0P641 193 aa17.22■□□□□ 0.35
SCARB1-203ENST00000415380 PRSS53Q2L4Q9 553 aa17.22■□□□□ 0.35
SCARB1-203ENST00000415380 ZNF630Q2M218 657 aaPredicted RBP17.22■□□□□ 0.35
SCARB1-203ENST00000415380 ASTLQ6HA08 431 aaPredicted RBP17.22■□□□□ 0.35
SCARB1-203ENST00000415380 FRMPD2BQ6IN97 320 aa17.22■□□□□ 0.35
SCARB1-203ENST00000415380 SLC44A2Q8IWA5 706 aaPredicted RBP17.22■□□□□ 0.35
SCARB1-203ENST00000415380 TCEAL8Q8IYN2 117 aa17.22■□□□□ 0.35
SCARB1-203ENST00000415380 RASGEF1AQ8N9B8 481 aa17.22■□□□□ 0.35
SCARB1-203ENST00000415380 WDR48Q8TAF3 677 aa17.22■□□□□ 0.35
SCARB1-203ENST00000415380 OPALINQ96PE5 141 aa17.22■□□□□ 0.35
SCARB1-203ENST00000415380 CCDC32Q9BV29 185 aa17.22■□□□□ 0.35
SCARB1-203ENST00000415380 ENOPH1Q9UHY7 261 aa17.22■□□□□ 0.35
SCARB1-203ENST00000415380 SLC25A13Q9UJS0 675 aa17.22■□□□□ 0.35
SCARB1-203ENST00000415380 FAM227AF5H4B4 570 aa17.21■□□□□ 0.35
SCARB1-203ENST00000415380 H3BQ06 376 aaPredicted RBP17.21■□□□□ 0.35
SCARB1-203ENST00000415380 MPZL2O60487 215 aa17.21■□□□□ 0.35
SCARB1-203ENST00000415380 IFNA14P01570 189 aa17.21■□□□□ 0.35
SCARB1-203ENST00000415380 PTPN2P17706 415 aa17.21■□□□□ 0.35
SCARB1-203ENST00000415380 TNFSF8P32971 234 aa17.21■□□□□ 0.35
SCARB1-203ENST00000415380 PDE7AQ13946 482 aa17.21■□□□□ 0.35
SCARB1-203ENST00000415380 E2F2Q14209 437 aa17.21■□□□□ 0.35
SCARB1-203ENST00000415380 IER5LQ5T953 404 aa17.21■□□□□ 0.35
SCARB1-203ENST00000415380 PSD4Q8NDX1 1056 aa17.21■□□□□ 0.35
SCARB1-203ENST00000415380 WRAP53Q9BUR4 548 aaKnown RBP17.21■□□□□ 0.35
SCARB1-203ENST00000415380 TBC1D24Q9ULP9 559 aa17.21■□□□□ 0.35
SCARB1-203ENST00000415380 SH2B3Q9UQQ2 575 aa17.21■□□□□ 0.35
SCARB1-203ENST00000415380 A0A075B6Q4 140 aa17.21■□□□□ 0.35
SCARB1-203ENST00000415380 FAM47E-STBD1D6RA91 191 aa17.21■□□□□ 0.35
SCARB1-203ENST00000415380 NRG2O14511 850 aaPredicted RBP17.21■□□□□ 0.35
SCARB1-203ENST00000415380 TGFB1P01137 390 aa17.21■□□□□ 0.35
SCARB1-203ENST00000415380 CTSAP10619 480 aa17.21■□□□□ 0.35
SCARB1-203ENST00000415380 ZNF30P17039 623 aa17.21■□□□□ 0.35
SCARB1-203ENST00000415380 RHCEP18577 417 aa17.21■□□□□ 0.35
SCARB1-203ENST00000415380 PDHA2P29803 388 aa17.21■□□□□ 0.35
SCARB1-203ENST00000415380 VIPR1P32241 457 aa17.21■□□□□ 0.35
SCARB1-203ENST00000415380 BCL7AQ4VC05 210 aa17.21■□□□□ 0.35
SCARB1-203ENST00000415380 LHX8Q68G74 356 aa17.21■□□□□ 0.35
SCARB1-203ENST00000415380 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.21■□□□□ 0.352e-11■■■■□ 19.5
SCARB1-203ENST00000415380 C16orf78Q8WTQ4 265 aa17.21■□□□□ 0.35
SCARB1-203ENST00000415380 MRPS31Q92665 395 aaKnown RBP17.21■□□□□ 0.35
SCARB1-203ENST00000415380 CNPPD1Q9BV87 410 aa17.21■□□□□ 0.35
SCARB1-203ENST00000415380 SMG9Q9H0W8 520 aaKnown RBP17.21■□□□□ 0.35
SCARB1-203ENST00000415380 SMURF1Q9HCE7 757 aa17.21■□□□□ 0.35
SCARB1-203ENST00000415380 CRNNQ9UBG3 495 aaPredicted RBP17.21■□□□□ 0.35
SCARB1-203ENST00000415380 SLC5A10A0PJK1 596 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 GRM6O15303 877 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 ENTPD6O75354 484 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 KLHL18O94889 574 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 ARAFP10398 606 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 POLR2EP19388 210 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms