RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 CCZ1P86791 482 aaPredicted RBP17.99■□□□□ 0.47
UBXN4-202ENST00000415164 CYP1B1Q16678 543 aa17.99■□□□□ 0.47
UBXN4-202ENST00000415164 TEDDM1Q5T9Z0 273 aa17.99■□□□□ 0.47
UBXN4-202ENST00000415164 SPNS3Q6ZMD2 512 aa17.99■□□□□ 0.47
UBXN4-202ENST00000415164 FRA10AC1Q70Z53 315 aa17.99■□□□□ 0.47
UBXN4-202ENST00000415164 IGDCC3Q8IVU1 814 aa17.99■□□□□ 0.47
UBXN4-202ENST00000415164 CNTN4Q8IWV2 1026 aa17.99■□□□□ 0.47
UBXN4-202ENST00000415164 ZFP62Q8NB50 900 aaPredicted RBP17.99■□□□□ 0.47
UBXN4-202ENST00000415164 PSD4Q8NDX1 1056 aa17.99■□□□□ 0.47
UBXN4-202ENST00000415164 C16orf52Q8NHV5 167 aa17.99■□□□□ 0.47
UBXN4-202ENST00000415164 SMIM10Q96HG1 83 aa17.99■□□□□ 0.47
UBXN4-202ENST00000415164 SEC16BQ96JE7 1060 aa17.99■□□□□ 0.47
UBXN4-202ENST00000415164 NPDC1Q9NQX5 325 aaPredicted RBP17.99■□□□□ 0.47
UBXN4-202ENST00000415164 DEPPQ9NTK1 212 aa17.99■□□□□ 0.47
UBXN4-202ENST00000415164 ZNF223Q9UK11 482 aaPredicted RBP17.99■□□□□ 0.47
UBXN4-202ENST00000415164 CHMP2BQ9UQN3 213 aa17.99■□□□□ 0.47
UBXN4-202ENST00000415164 YARS2Q9Y2Z4 477 aaKnown RBP17.99■□□□□ 0.47
UBXN4-202ENST00000415164 GTF3C1Q12789 2109 aa17.99■□□□□ 0.47
UBXN4-202ENST00000415164 PINLYPA6NC86 204 aa17.98■□□□□ 0.47
UBXN4-202ENST00000415164 WWP2O00308 870 aa17.98■□□□□ 0.47
UBXN4-202ENST00000415164 CLDN4O14493 209 aa17.98■□□□□ 0.47
UBXN4-202ENST00000415164 DNALI1O14645 258 aaPredicted RBP17.98■□□□□ 0.47
UBXN4-202ENST00000415164 H2AFYO75367 372 aaKnown RBP17.98■□□□□ 0.47
UBXN4-202ENST00000415164 ZFAND5O76080 213 aa17.98■□□□□ 0.47
UBXN4-202ENST00000415164 WDR47O94967 919 aa17.98■□□□□ 0.47
UBXN4-202ENST00000415164 NADKO95544 446 aaPredicted RBP17.98■□□□□ 0.47
UBXN4-202ENST00000415164 NUP107P57740 925 aa17.98■□□□□ 0.47
UBXN4-202ENST00000415164 RUNX2Q13950 521 aa17.98■□□□□ 0.47
UBXN4-202ENST00000415164 SLBPQ14493 270 aaKnown RBP eCLIP17.98■□□□□ 0.47
UBXN4-202ENST00000415164 C18orf21Q32NC0 220 aaPredicted RBP17.98■□□□□ 0.47
UBXN4-202ENST00000415164 ZNF585AQ6P3V2 769 aa17.98■□□□□ 0.47
UBXN4-202ENST00000415164 SBSNQ6UWP8 590 aa17.98■□□□□ 0.47
UBXN4-202ENST00000415164 LILRB4Q8NHJ6 448 aa17.98■□□□□ 0.47
UBXN4-202ENST00000415164 CREB3L4Q8TEY5 395 aa17.98■□□□□ 0.47
UBXN4-202ENST00000415164 GAL3ST3Q96A11 431 aa17.98■□□□□ 0.47
UBXN4-202ENST00000415164 AICDAQ9GZX7 198 aa17.98■□□□□ 0.47
UBXN4-202ENST00000415164 MRPS33Q9Y291 106 aaKnown RBP17.98■□□□□ 0.47
UBXN4-202ENST00000415164 PPP2R2CQ9Y2T4 447 aa17.98■□□□□ 0.47
UBXN4-202ENST00000415164 NCF1BA6NI72 391 aaPredicted RBP17.97■□□□□ 0.47
UBXN4-202ENST00000415164 NCF1CA8MVU1 366 aaPredicted RBP17.97■□□□□ 0.47
UBXN4-202ENST00000415164 B3GALT2O43825 422 aa17.97■□□□□ 0.47
UBXN4-202ENST00000415164 OR6B1O95007 311 aa17.97■□□□□ 0.47
UBXN4-202ENST00000415164 NCF1P14598 390 aaPredicted RBP17.97■□□□□ 0.47
UBXN4-202ENST00000415164 GDF5P43026 501 aa17.97■□□□□ 0.47
UBXN4-202ENST00000415164 FNTAP49354 379 aa17.97■□□□□ 0.47
UBXN4-202ENST00000415164 HNRNPFP52597 415 aaKnown RBP17.97■□□□□ 0.47
UBXN4-202ENST00000415164 PLA2G16P53816 162 aa17.97■□□□□ 0.47
UBXN4-202ENST00000415164 RAB38P57729 211 aa17.97■□□□□ 0.47
UBXN4-202ENST00000415164 ZNF460Q14592 562 aa17.97■□□□□ 0.47
UBXN4-202ENST00000415164 ACBD4Q8NC06 268 aa17.97■□□□□ 0.47
UBXN4-202ENST00000415164 TMEM52Q8NDY8 209 aa17.97■□□□□ 0.47
UBXN4-202ENST00000415164 NAT9Q9BTE0 207 aa17.97■□□□□ 0.47
UBXN4-202ENST00000415164 COPS7BQ9H9Q2 264 aaPredicted RBP17.97■□□□□ 0.47
UBXN4-202ENST00000415164 PNPLA3Q9NST1 481 aa17.97■□□□□ 0.47
UBXN4-202ENST00000415164 TNFRSF10DQ9UBN6 386 aa17.97■□□□□ 0.47
UBXN4-202ENST00000415164 JRKLQ9Y4A0 524 aa17.97■□□□□ 0.47
UBXN4-202ENST00000415164 CLCA3PQ9Y6N3 262 aa17.97■□□□□ 0.47
UBXN4-202ENST00000415164 ZFHX3Q15911 3703 aa17.97■□□□□ 0.47
UBXN4-202ENST00000415164 A0A088AWK7 358 aa17.96■□□□□ 0.47
UBXN4-202ENST00000415164 A0A0G2JMM0 328 aa17.96■□□□□ 0.47
UBXN4-202ENST00000415164 A0A1W2PPB8 328 aa17.96■□□□□ 0.47
UBXN4-202ENST00000415164 A0A1W2PRS3 328 aa17.96■□□□□ 0.47
UBXN4-202ENST00000415164 KIR3DP1A8MWS1 328 aa17.96■□□□□ 0.47
UBXN4-202ENST00000415164 TGFBR3LH3BV60 316 aa17.96■□□□□ 0.47
UBXN4-202ENST00000415164 TOXO94900 526 aa17.96■□□□□ 0.47
UBXN4-202ENST00000415164 ZWINTO95229 277 aa17.96■□□□□ 0.47
UBXN4-202ENST00000415164 CD1EP15812 388 aa17.96■□□□□ 0.47
UBXN4-202ENST00000415164 TNNI3P19429 210 aa17.96■□□□□ 0.47
UBXN4-202ENST00000415164 ZNF10P21506 573 aaPredicted RBP17.96■□□□□ 0.47
UBXN4-202ENST00000415164 MSX1P28360 303 aa17.96■□□□□ 0.47
UBXN4-202ENST00000415164 HNRNPH1P31943 449 aaKnown RBP17.96■□□□□ 0.47
UBXN4-202ENST00000415164 SOX3P41225 446 aa17.96■□□□□ 0.47
UBXN4-202ENST00000415164 ELK3P41970 407 aa17.96■□□□□ 0.47
UBXN4-202ENST00000415164 TERF2Q15554 542 aa17.96■□□□□ 0.47
UBXN4-202ENST00000415164 PPP1R3AQ16821 1122 aa17.96■□□□□ 0.47
UBXN4-202ENST00000415164 GXYLT1Q4G148 440 aa17.96■□□□□ 0.47
UBXN4-202ENST00000415164 CES4AQ5XG92 561 aa17.96■□□□□ 0.47
UBXN4-202ENST00000415164 TRMT10BQ6PF06 316 aaKnown RBP17.96■□□□□ 0.47
UBXN4-202ENST00000415164 ACAD11Q709F0 780 aa17.96■□□□□ 0.47
UBXN4-202ENST00000415164 LRRC8AQ8IWT6 810 aa17.96■□□□□ 0.47
UBXN4-202ENST00000415164 SCUBE1Q8IWY4 988 aa17.96■□□□□ 0.47
UBXN4-202ENST00000415164 KLHDC8AQ8IYD2 350 aa17.96■□□□□ 0.47
UBXN4-202ENST00000415164 ARMC10Q8N2F6 343 aa17.96■□□□□ 0.47
UBXN4-202ENST00000415164 OR2M7Q8NG81 312 aa17.96■□□□□ 0.47
UBXN4-202ENST00000415164 NRGNQ92686 78 aa17.96■□□□□ 0.47
UBXN4-202ENST00000415164 PWWP2AQ96N64 755 aa17.96■□□□□ 0.47
UBXN4-202ENST00000415164 TREX2Q9BQ50 279 aaPredicted RBP17.96■□□□□ 0.47
UBXN4-202ENST00000415164 ADAP2Q9NPF8 381 aa17.96■□□□□ 0.47
UBXN4-202ENST00000415164 CORO1CQ9ULV4 474 aaPredicted RBP17.96■□□□□ 0.47
UBXN4-202ENST00000415164 CLGNO14967 610 aa17.95■□□□□ 0.46
UBXN4-202ENST00000415164 C1GALT1C1LP0DN25 315 aa17.95■□□□□ 0.46
UBXN4-202ENST00000415164 ZNF37AP17032 561 aaPredicted RBP17.95■□□□□ 0.46
UBXN4-202ENST00000415164 GNAZP19086 355 aa17.95■□□□□ 0.46
UBXN4-202ENST00000415164 HSD17B7P56937 341 aa17.95■□□□□ 0.46
UBXN4-202ENST00000415164 TFF3Q07654 80 aa17.95■□□□□ 0.46
UBXN4-202ENST00000415164 STX4Q12846 297 aa17.95■□□□□ 0.46
UBXN4-202ENST00000415164 ZNF750Q32MQ0 723 aa17.95■□□□□ 0.46
UBXN4-202ENST00000415164 XKR6Q5GH73 641 aa17.95■□□□□ 0.46
UBXN4-202ENST00000415164 EMC4Q5J8M3 183 aa17.95■□□□□ 0.46
UBXN4-202ENST00000415164 TMIGD1Q6UXZ0 262 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms