RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 NKG7Q16617 165 aa12.79□□□□□ -0.36
RAPGEF1-204ENST00000414781 CFAP157Q5JU67 520 aa12.79□□□□□ -0.36
RAPGEF1-204ENST00000414781 LIPMQ5VYY2 423 aa12.79□□□□□ -0.36
RAPGEF1-204ENST00000414781 ATG16L1Q676U5 607 aa12.79□□□□□ -0.36
RAPGEF1-204ENST00000414781 TMEM151BQ8IW70 566 aa12.79□□□□□ -0.36
RAPGEF1-204ENST00000414781 ZNF655Q8N720 491 aaPredicted RBP12.79□□□□□ -0.36
RAPGEF1-204ENST00000414781 PTGR2Q8N8N7 351 aaPredicted RBP12.79□□□□□ -0.36
RAPGEF1-204ENST00000414781 C19orf47Q8N9M1 422 aaKnown RBP12.79□□□□□ -0.36
RAPGEF1-204ENST00000414781 OR5AR1Q8NGP9 310 aa12.79□□□□□ -0.36
RAPGEF1-204ENST00000414781 AGAP11Q8TF27 550 aa12.79□□□□□ -0.36
RAPGEF1-204ENST00000414781 EXT2Q93063 718 aa12.79□□□□□ -0.36
RAPGEF1-204ENST00000414781 RHBDF1Q96CC6 855 aa12.79□□□□□ -0.36
RAPGEF1-204ENST00000414781 PKP4Q99569 1192 aa12.79□□□□□ -0.36
RAPGEF1-204ENST00000414781 SMR3AQ99954 134 aa12.79□□□□□ -0.36
RAPGEF1-204ENST00000414781 CAPS2Q9BXY5 557 aa12.79□□□□□ -0.36
RAPGEF1-204ENST00000414781 SPRTNQ9H040 489 aaPredicted RBP12.79□□□□□ -0.36
RAPGEF1-204ENST00000414781 PCBD2Q9H0N5 130 aa12.79□□□□□ -0.36
RAPGEF1-204ENST00000414781 SLC22A11Q9NSA0 550 aa12.79□□□□□ -0.36
RAPGEF1-204ENST00000414781 WWOXQ9NZC7 414 aa12.79□□□□□ -0.36
RAPGEF1-204ENST00000414781 PTGFRNQ9P2B2 879 aa12.79□□□□□ -0.36
RAPGEF1-204ENST00000414781 PTBP2Q9UKA9 531 aaKnown RBP12.79□□□□□ -0.36
RAPGEF1-204ENST00000414781 IKZF3Q9UKT9 509 aa12.79□□□□□ -0.36
RAPGEF1-204ENST00000414781 PPT2Q9UMR5 302 aa12.79□□□□□ -0.36
RAPGEF1-204ENST00000414781 AKAP6Q13023 2319 aa12.79□□□□□ -0.36
RAPGEF1-204ENST00000414781 NCF1BA6NI72 391 aaPredicted RBP12.78□□□□□ -0.36
RAPGEF1-204ENST00000414781 A8MT66 165 aa12.78□□□□□ -0.36
RAPGEF1-204ENST00000414781 NCF1CA8MVU1 366 aaPredicted RBP12.78□□□□□ -0.36
RAPGEF1-204ENST00000414781 STK16O75716 305 aa12.78□□□□□ -0.36
RAPGEF1-204ENST00000414781 HOXD4P09016 255 aaPredicted RBP12.78□□□□□ -0.36
RAPGEF1-204ENST00000414781 SBK3P0C264 359 aa12.78□□□□□ -0.36
RAPGEF1-204ENST00000414781 NCF1P14598 390 aaPredicted RBP12.78□□□□□ -0.36
RAPGEF1-204ENST00000414781 PVRP15151 417 aa12.78□□□□□ -0.36
RAPGEF1-204ENST00000414781 ABOP16442 354 aa12.78□□□□□ -0.36
RAPGEF1-204ENST00000414781 ALDH3A1P30838 453 aa12.78□□□□□ -0.36
RAPGEF1-204ENST00000414781 SERPINB5P36952 375 aa12.78□□□□□ -0.36
RAPGEF1-204ENST00000414781 BDKRB1P46663 353 aa12.78□□□□□ -0.36
RAPGEF1-204ENST00000414781 RAB28P51157 221 aa12.78□□□□□ -0.36
RAPGEF1-204ENST00000414781 DGKQP52824 942 aa12.78□□□□□ -0.36
RAPGEF1-204ENST00000414781 HERVK_113P63132 956 aa12.78□□□□□ -0.36
RAPGEF1-204ENST00000414781 PRKG2Q13237 762 aa12.78□□□□□ -0.36
RAPGEF1-204ENST00000414781 SETDB1Q15047 1291 aa12.78□□□□□ -0.36
RAPGEF1-204ENST00000414781 PCBP2Q15366 365 aaKnown RBP eCLIP12.78□□□□□ -0.36
RAPGEF1-204ENST00000414781 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.78□□□□□ -0.36
RAPGEF1-204ENST00000414781 CAPN13Q6MZZ7 669 aaPredicted RBP12.78□□□□□ -0.36
RAPGEF1-204ENST00000414781 AGTRAPQ6RW13 159 aa12.78□□□□□ -0.36
RAPGEF1-204ENST00000414781 C10orf107Q8IVU9 208 aa12.78□□□□□ -0.36
RAPGEF1-204ENST00000414781 HMGCLL1Q8TB92 370 aa12.78□□□□□ -0.36
RAPGEF1-204ENST00000414781 SLC22A18Q96BI1 424 aa12.78□□□□□ -0.36
RAPGEF1-204ENST00000414781 PHF21BQ96EK2 531 aa12.78□□□□□ -0.36
RAPGEF1-204ENST00000414781 L3HYPDHQ96EM0 354 aa12.78□□□□□ -0.36
RAPGEF1-204ENST00000414781 RMND5BQ96G75 393 aaPredicted RBP12.78□□□□□ -0.36
RAPGEF1-204ENST00000414781 HGH1Q9BTY7 390 aa12.78□□□□□ -0.36
RAPGEF1-204ENST00000414781 TRMOQ9BU70 441 aa12.78□□□□□ -0.36
RAPGEF1-204ENST00000414781 ERVK-6Q9BXR3 956 aa12.78□□□□□ -0.36
RAPGEF1-204ENST00000414781 CD244Q9BZW8 370 aa12.78□□□□□ -0.36
RAPGEF1-204ENST00000414781 KLHL25Q9H0H3 589 aa12.78□□□□□ -0.36
RAPGEF1-204ENST00000414781 C12orf65Q9H3J6 166 aaKnown RBP12.78□□□□□ -0.36
RAPGEF1-204ENST00000414781 ZNF160Q9HCG1 818 aa12.78□□□□□ -0.36
RAPGEF1-204ENST00000414781 IRAK4Q9NWZ3 460 aa12.78□□□□□ -0.36
RAPGEF1-204ENST00000414781 OR6C2Q9NZP2 312 aa12.78□□□□□ -0.36
RAPGEF1-204ENST00000414781 STK38LQ9Y2H1 464 aa12.78□□□□□ -0.36
RAPGEF1-204ENST00000414781 ANGPTL3Q9Y5C1 460 aa12.78□□□□□ -0.36
RAPGEF1-204ENST00000414781 FBN1P35555 2871 aaKnown RBP12.77□□□□□ -0.36
RAPGEF1-204ENST00000414781 A0A1B0GX78 115 aa12.77□□□□□ -0.37
RAPGEF1-204ENST00000414781 WDR91A4D1P6 747 aa12.77□□□□□ -0.37
RAPGEF1-204ENST00000414781 OR5H15A6NDH6 313 aa12.77□□□□□ -0.37
RAPGEF1-204ENST00000414781 PRRG2O14669 202 aa12.77□□□□□ -0.37
RAPGEF1-204ENST00000414781 PROM1O43490 865 aa12.77□□□□□ -0.37
RAPGEF1-204ENST00000414781 BMP10O95393 424 aa12.77□□□□□ -0.37
RAPGEF1-204ENST00000414781 WDPCPO95876 746 aa12.77□□□□□ -0.37
RAPGEF1-204ENST00000414781 SLC16A8O95907 504 aa12.77□□□□□ -0.37
RAPGEF1-204ENST00000414781 SERPINA7P05543 415 aa12.77□□□□□ -0.37
RAPGEF1-204ENST00000414781 PRR35P0CG20 571 aa12.77□□□□□ -0.37
RAPGEF1-204ENST00000414781 MDH1P40925 334 aaKnown RBP12.77□□□□□ -0.37
RAPGEF1-204ENST00000414781 PNLIPRP1P54315 467 aa12.77□□□□□ -0.37
RAPGEF1-204ENST00000414781 ARSFP54793 590 aa12.77□□□□□ -0.37
RAPGEF1-204ENST00000414781 AP2B1P63010 937 aa12.77□□□□□ -0.37
RAPGEF1-204ENST00000414781 PCLAFQ15004 111 aa12.77□□□□□ -0.37
RAPGEF1-204ENST00000414781 PDK4Q16654 411 aa12.77□□□□□ -0.37
RAPGEF1-204ENST00000414781 NCCRP1Q6ZVX7 275 aaPredicted RBP12.77□□□□□ -0.37
RAPGEF1-204ENST00000414781 AMIGO1Q86WK6 493 aa12.77□□□□□ -0.37
RAPGEF1-204ENST00000414781 SPNS2Q8IVW8 549 aa12.77□□□□□ -0.37
RAPGEF1-204ENST00000414781 KIRREL3Q8IZU9 778 aa12.77□□□□□ -0.37
RAPGEF1-204ENST00000414781 OR52E1Q8NGJ3 308 aa12.77□□□□□ -0.37
RAPGEF1-204ENST00000414781 BRIX1Q8TDN6 353 aaKnown RBP12.77□□□□□ -0.37
RAPGEF1-204ENST00000414781 LRRC8CQ8TDW0 803 aa12.77□□□□□ -0.37
RAPGEF1-204ENST00000414781 UBTD2Q8WUN7 234 aa12.77□□□□□ -0.37
RAPGEF1-204ENST00000414781 SMPDL3AQ92484 453 aa12.77□□□□□ -0.37
RAPGEF1-204ENST00000414781 PSMF1Q92530 271 aa12.77□□□□□ -0.37
RAPGEF1-204ENST00000414781 MAGEB18Q96M61 343 aa12.77□□□□□ -0.37
RAPGEF1-204ENST00000414781 MIPEPQ99797 713 aa12.77□□□□□ -0.37
RAPGEF1-204ENST00000414781 C1QTNF3Q9BXJ4 246 aa12.77□□□□□ -0.37
RAPGEF1-204ENST00000414781 POLDIP3Q9BY77 421 aaKnown RBP12.77□□□□□ -0.37
RAPGEF1-204ENST00000414781 MANSC1Q9H8J5 431 aa12.77□□□□□ -0.37
RAPGEF1-204ENST00000414781 EML4Q9HC35 981 aaKnown RBP12.77□□□□□ -0.37
RAPGEF1-204ENST00000414781 KCNJ16Q9NPI9 418 aa12.77□□□□□ -0.37
RAPGEF1-204ENST00000414781 STOX2Q9P2F5 926 aaPredicted RBP12.77□□□□□ -0.37
RAPGEF1-204ENST00000414781 OPTCQ9UBM4 332 aa12.77□□□□□ -0.37
RAPGEF1-204ENST00000414781 MKL2Q9ULH7 1088 aa12.77□□□□□ -0.37
RAPGEF1-204ENST00000414781 TMEM114B3SHH9 223 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms