RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 A8MU76 341 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 RTCAO00442 366 aaKnown RBP14.78□□□□□ -0.04
SHMT2-202ENST00000414700 P2RX6O15547 441 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 FLRT2O43155 660 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 RPLP0P05388 317 aaKnown RBP14.78□□□□□ -0.04
SHMT2-202ENST00000414700 G6PDP11413 515 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 TACR1P25103 407 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 SEPHS1P49903 392 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 RPS15AP62244 130 aaKnown RBP14.78□□□□□ -0.04
SHMT2-202ENST00000414700 EMX2Q04743 252 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 PTGR1Q14914 329 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 CCDC92Q53HC0 331 aaPredicted RBP14.78□□□□□ -0.04
SHMT2-202ENST00000414700 C10orf62Q5T681 223 aaPredicted RBP14.78□□□□□ -0.04
SHMT2-202ENST00000414700 KCT2Q8NC54 265 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 ADCY4Q8NFM4 1077 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 CMTM7Q96FZ5 175 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 ZDHHC12Q96GR4 267 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 CNDP2Q96KP4 475 aaKnown RBP14.78□□□□□ -0.04
SHMT2-202ENST00000414700 LRGUKQ96M69 825 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 ZFYVE21Q9BQ24 234 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 SYNDIG1Q9H7V2 258 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 TMEM9BQ9NQ34 198 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 PCDHGB4Q9UN71 923 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 PCDHGB5Q9Y5G0 923 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 GPR45Q9Y5Y3 372 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 LRIT2A6NDA9 550 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 NPIPB8E9PQR5 432 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 PLPP1O14494 284 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 E2F6O75461 281 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 FKBP9O95302 570 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 C9P02748 559 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 PRDX6P30041 224 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 AHRP35869 848 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 RAE1P78406 368 aaKnown RBP14.78□□□□□ -0.04
SHMT2-202ENST00000414700 KCNAB1Q14722 419 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 CSRP2Q16527 193 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 PDCD4Q53EL6 469 aaKnown RBP14.78□□□□□ -0.04
SHMT2-202ENST00000414700 KHDRBS2Q5VWX1 349 aaKnown RBP14.78□□□□□ -0.04
SHMT2-202ENST00000414700 PAOXQ6QHF9 649 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 RNF44Q7L0R7 432 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 TICAM1Q8IUC6 712 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 PLXDC1Q8IUK5 500 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 WDR48Q8TAF3 677 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 SLC13A3Q8WWT9 602 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 NAT6Q93015 286 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 VPS50Q96JG6 964 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 EGLN2Q96KS0 407 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 PHF12Q96QT6 1004 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 PHOX2BQ99453 314 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 ZNF717Q9BY31 904 aaPredicted RBP14.78□□□□□ -0.04
SHMT2-202ENST00000414700 ACTL8Q9H568 366 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 LHX9Q9NQ69 397 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 AIG1Q9NVV5 245 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 ANKMY1Q9P2S6 941 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 MN1Q10571 1320 aaPredicted RBP14.78□□□□□ -0.04
SHMT2-202ENST00000414700 COL5A1P20908 1838 aaPredicted RBP14.78□□□□□ -0.04
SHMT2-202ENST00000414700 ADAMTS20P59510 1910 aa14.78□□□□□ -0.04
SHMT2-202ENST00000414700 C4orf47A7E2U8 309 aa14.77□□□□□ -0.04
SHMT2-202ENST00000414700 H0YGG7 62 aa14.77□□□□□ -0.04
SHMT2-202ENST00000414700 AGRPO00253 132 aa14.77□□□□□ -0.04
SHMT2-202ENST00000414700 SEC16AO15027 2179 aa14.77□□□□□ -0.04
SHMT2-202ENST00000414700 CLEC3AO75596 197 aa14.77□□□□□ -0.04
SHMT2-202ENST00000414700 B3GALT4O96024 378 aa14.77□□□□□ -0.04
SHMT2-202ENST00000414700 ZNF23P17027 643 aa14.77□□□□□ -0.04
SHMT2-202ENST00000414700 PTX3P26022 381 aaPredicted RBP14.77□□□□□ -0.04
SHMT2-202ENST00000414700 ARF3P61204 181 aaPredicted RBP14.77□□□□□ -0.04
SHMT2-202ENST00000414700 ACSM2AQ08AH3 577 aa14.77□□□□□ -0.04
SHMT2-202ENST00000414700 KLF10Q13118 480 aa14.77□□□□□ -0.04
SHMT2-202ENST00000414700 HKDC1Q2TB90 917 aa14.77□□□□□ -0.04
SHMT2-202ENST00000414700 DEPDC1Q5TB30 811 aa14.77□□□□□ -0.04
SHMT2-202ENST00000414700 CROCCQ5TZA2 2017 aa14.77□□□□□ -0.04
SHMT2-202ENST00000414700 CACHD1Q5VU97 1274 aa14.77□□□□□ -0.04
SHMT2-202ENST00000414700 ACSM2BQ68CK6 577 aa14.77□□□□□ -0.04
SHMT2-202ENST00000414700 WDR74Q6RFH5 385 aaPredicted RBP14.77□□□□□ -0.04
SHMT2-202ENST00000414700 ISLR2Q6UXK2 745 aa14.77□□□□□ -0.04
SHMT2-202ENST00000414700 COMMD6Q7Z4G1 85 aa14.77□□□□□ -0.04
SHMT2-202ENST00000414700 SPATA19Q7Z5L4 167 aa14.77□□□□□ -0.04
SHMT2-202ENST00000414700 UBE3DQ7Z6J8 389 aa14.77□□□□□ -0.04
SHMT2-202ENST00000414700 LIX1Q8N485 282 aa14.77□□□□□ -0.04
SHMT2-202ENST00000414700 CPSF7Q8N684 471 aaKnown RBP14.77□□□□□ -0.04
SHMT2-202ENST00000414700 TTLQ8NG68 377 aa14.77□□□□□ -0.04
SHMT2-202ENST00000414700 CLHC1Q8NHS4 586 aa14.77□□□□□ -0.04
SHMT2-202ENST00000414700 CHTF18Q8WVB6 975 aa14.77□□□□□ -0.04
SHMT2-202ENST00000414700 REXO4Q9GZR2 422 aaKnown RBP14.77□□□□□ -0.04
SHMT2-202ENST00000414700 SDR39U1Q9NRG7 319 aaPredicted RBP14.77□□□□□ -0.04
SHMT2-202ENST00000414700 STARD5Q9NSY2 213 aa14.77□□□□□ -0.04
SHMT2-202ENST00000414700 CCDC167Q9P0B6 97 aa14.77□□□□□ -0.04
SHMT2-202ENST00000414700 PPT2Q9UMR5 302 aa14.77□□□□□ -0.04
SHMT2-202ENST00000414700 LDOC1O95751 146 aaPredicted RBP14.76□□□□□ -0.05
SHMT2-202ENST00000414700 EIF2S1P05198 315 aaKnown RBP14.76□□□□□ -0.05
SHMT2-202ENST00000414700 BCKDHAP12694 445 aa14.76□□□□□ -0.05
SHMT2-202ENST00000414700 SDC1P18827 310 aa14.76□□□□□ -0.05
SHMT2-202ENST00000414700 GPX3P22352 226 aa14.76□□□□□ -0.05
SHMT2-202ENST00000414700 PLA2G16P53816 162 aa14.76□□□□□ -0.05
SHMT2-202ENST00000414700 UFM1P61960 85 aa14.76□□□□□ -0.05
SHMT2-202ENST00000414700 NOXRED1Q6NXP6 359 aa14.76□□□□□ -0.05
SHMT2-202ENST00000414700 ZFP1Q6P2D0 407 aa14.76□□□□□ -0.05
SHMT2-202ENST00000414700 CYP20A1Q6UW02 462 aa14.76□□□□□ -0.05
SHMT2-202ENST00000414700 AMIGO2Q86SJ2 522 aa14.76□□□□□ -0.05
SHMT2-202ENST00000414700 HOMEZQ8IX15 550 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms