RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 MTBPQ96DY7 904 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 PHF21BQ96EK2 531 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 C19orf60Q96EN9 201 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 CMTM7Q96FZ5 175 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 ZNF354BQ96LW1 612 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 GPR78Q96P69 363 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 F2RL3Q96RI0 385 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 CCDC77Q9BR77 488 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 CENPKQ9BS16 269 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 AICDAQ9GZX7 198 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 IPPKQ9H8X2 491 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 MMP25Q9NPA2 562 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 ASF1BQ9NVP2 202 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 ZNF358Q9NW07 568 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 PLA2G3Q9NZ20 509 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 MMACHCQ9Y4U1 282 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 PCDHGA11Q9Y5H2 935 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 PCDHGA10Q9Y5H3 936 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 SPACA6W5XKT8 324 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 DOPEY2Q9Y3R5 2298 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 TRAV17A0A0B4J275 112 aa10.52□□□□□ -0.73
RFFL-204ENST00000414419 IQANK1A0A1B0GTG1 560 aa10.52□□□□□ -0.73
RFFL-204ENST00000414419 C4orf51C9J302 202 aa10.52□□□□□ -0.73
RFFL-204ENST00000414419 UGDHO60701 494 aa10.52□□□□□ -0.73
RFFL-204ENST00000414419 SH3BGRLO75368 114 aa10.52□□□□□ -0.73
RFFL-204ENST00000414419 F10P00742 488 aa10.52□□□□□ -0.73
RFFL-204ENST00000414419 MAOAP21397 527 aa10.52□□□□□ -0.73
RFFL-204ENST00000414419 GNLYP22749 145 aa10.52□□□□□ -0.73
RFFL-204ENST00000414419 CERS1P27544 350 aa10.52□□□□□ -0.73
RFFL-204ENST00000414419 MAGEA12P43365 314 aa10.52□□□□□ -0.73
RFFL-204ENST00000414419 TSFMP43897 325 aaKnown RBP10.52□□□□□ -0.73
RFFL-204ENST00000414419 RAP1GDS1P52306 607 aa10.52□□□□□ -0.73
RFFL-204ENST00000414419 HSD17B7P56937 341 aa10.52□□□□□ -0.73
RFFL-204ENST00000414419 SLC26A5P58743 744 aa10.52□□□□□ -0.73
RFFL-204ENST00000414419 PCDH1Q08174 1060 aa10.52□□□□□ -0.73
RFFL-204ENST00000414419 SLC13A2Q13183 592 aa10.52□□□□□ -0.73
RFFL-204ENST00000414419 UBAP2LQ14157 1087 aaKnown RBP10.52□□□□□ -0.73
RFFL-204ENST00000414419 E2F2Q14209 437 aa10.52□□□□□ -0.73
RFFL-204ENST00000414419 MEP1AQ16819 746 aa10.52□□□□□ -0.73
RFFL-204ENST00000414419 TMEM35AQ53FP2 167 aa10.52□□□□□ -0.73
RFFL-204ENST00000414419 TEX35Q5T0J7 233 aa10.52□□□□□ -0.73
RFFL-204ENST00000414419 ADNP2Q6IQ32 1131 aa10.52□□□□□ -0.73
RFFL-204ENST00000414419 GOLGA7Q7Z5G4 137 aa10.52□□□□□ -0.73
RFFL-204ENST00000414419 VN1R5Q7Z5H4 357 aa10.52□□□□□ -0.73
RFFL-204ENST00000414419 CNPY4Q8N129 248 aa10.52□□□□□ -0.73
RFFL-204ENST00000414419 SLC5A8Q8N695 610 aa10.52□□□□□ -0.73
RFFL-204ENST00000414419 ZNF473Q8WTR7 871 aaKnown RBP10.52□□□□□ -0.73
RFFL-204ENST00000414419 ISL2Q96A47 359 aa10.52□□□□□ -0.73
RFFL-204ENST00000414419 QRFPRQ96P65 431 aa10.52□□□□□ -0.73
RFFL-204ENST00000414419 MRPL57Q9BQC6 102 aaKnown RBP10.52□□□□□ -0.73
RFFL-204ENST00000414419 TBCDQ9BTW9 1192 aa10.52□□□□□ -0.73
RFFL-204ENST00000414419 MS4A8Q9BY19 250 aa10.52□□□□□ -0.73
RFFL-204ENST00000414419 PRDM7Q9NQW5 492 aa10.52□□□□□ -0.73
RFFL-204ENST00000414419 PRTFDC1Q9NRG1 225 aa10.52□□□□□ -0.73
RFFL-204ENST00000414419 XPR1Q9UBH6 696 aa10.52□□□□□ -0.73
RFFL-204ENST00000414419 DAPP1Q9UN19 280 aa10.52□□□□□ -0.73
RFFL-204ENST00000414419 TCRBV16S1A1N1A0A5B0 115 aa10.51□□□□□ -0.73
RFFL-204ENST00000414419 SYNDIG1LA6NDD5 238 aa10.51□□□□□ -0.73
RFFL-204ENST00000414419 OR5H15A6NDH6 313 aa10.51□□□□□ -0.73
RFFL-204ENST00000414419 LRRC14BA6NHZ5 514 aa10.51□□□□□ -0.73
RFFL-204ENST00000414419 A8MUA0 341 aa10.51□□□□□ -0.73
RFFL-204ENST00000414419 TCP11X1B4DZS4 312 aa10.51□□□□□ -0.73
RFFL-204ENST00000414419 STX16-NPEPL1H3BU86 382 aa10.51□□□□□ -0.73
RFFL-204ENST00000414419 STX16O14662 325 aa10.51□□□□□ -0.73
RFFL-204ENST00000414419 SIX3O95343 332 aaPredicted RBP10.51□□□□□ -0.73
RFFL-204ENST00000414419 CLDN9O95484 217 aa10.51□□□□□ -0.73
RFFL-204ENST00000414419 WDPCPO95876 746 aa10.51□□□□□ -0.73
RFFL-204ENST00000414419 TBX6O95947 436 aaPredicted RBP10.51□□□□□ -0.73
RFFL-204ENST00000414419 FAM153BP0C7A2 387 aa10.51□□□□□ -0.73
RFFL-204ENST00000414419 EEF1DP29692 281 aaKnown RBP10.51□□□□□ -0.73
RFFL-204ENST00000414419 PIK3CBP42338 1070 aa10.51□□□□□ -0.73
RFFL-204ENST00000414419 SSR2P43308 183 aa10.51□□□□□ -0.73
RFFL-204ENST00000414419 UQCRFS1P47985 274 aa10.51□□□□□ -0.73
RFFL-204ENST00000414419 TNFSF10P50591 281 aa10.51□□□□□ -0.73
RFFL-204ENST00000414419 CCNG1P51959 295 aa10.51□□□□□ -0.73
RFFL-204ENST00000414419 LIM2P55344 173 aa10.51□□□□□ -0.73
RFFL-204ENST00000414419 SLC29A2Q14542 456 aa10.51□□□□□ -0.73
RFFL-204ENST00000414419 NR6A1Q15406 480 aa10.51□□□□□ -0.73
RFFL-204ENST00000414419 CPSF6Q16630 551 aaKnown RBP eCLIP10.51□□□□□ -0.73
RFFL-204ENST00000414419 FAM153CQ494X1 144 aa10.51□□□□□ -0.73
RFFL-204ENST00000414419 ACER2Q5QJU3 275 aa10.51□□□□□ -0.73
RFFL-204ENST00000414419 DEPDC1Q5TB30 811 aa10.51□□□□□ -0.73
RFFL-204ENST00000414419 FHL5Q5TD97 284 aa10.51□□□□□ -0.73
RFFL-204ENST00000414419 KHDRBS2Q5VWX1 349 aaKnown RBP10.51□□□□□ -0.73
RFFL-204ENST00000414419 FCRLBQ6BAA4 426 aa10.51□□□□□ -0.73
RFFL-204ENST00000414419 ADGRD1Q6QNK2 874 aa10.51□□□□□ -0.73
RFFL-204ENST00000414419 FAM180AQ6UWF9 173 aa10.51□□□□□ -0.73
RFFL-204ENST00000414419 ZNF595Q8IYB9 648 aa10.51□□□□□ -0.73
RFFL-204ENST00000414419 FAM26EQ8N5C1 309 aa10.51□□□□□ -0.73
RFFL-204ENST00000414419 FAM47BQ8NA70 645 aa10.51□□□□□ -0.73
RFFL-204ENST00000414419 HUS1BQ8NHY5 278 aa10.51□□□□□ -0.73
RFFL-204ENST00000414419 RGMAQ96B86 450 aa10.51□□□□□ -0.73
RFFL-204ENST00000414419 RNF32Q9H0A6 362 aa10.51□□□□□ -0.73
RFFL-204ENST00000414419 MRPL46Q9H2W6 279 aaKnown RBP10.51□□□□□ -0.73
RFFL-204ENST00000414419 NECTIN3Q9NQS3 549 aa10.51□□□□□ -0.73
RFFL-204ENST00000414419 PNO1Q9NRX1 252 aaKnown RBP10.51□□□□□ -0.73
RFFL-204ENST00000414419 FLNCQ14315 2725 aa10.51□□□□□ -0.73
RFFL-204ENST00000414419 IGKV3D-11A0A0A0MRZ8 115 aa10.5□□□□□ -0.73
RFFL-204ENST00000414419 SAGE2PA6NJ88 616 aa10.5□□□□□ -0.73
RFFL-204ENST00000414419 H0YIV9 168 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms