RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 AKAP12Q02952 1782 aa3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 ZNF142P52746 1687 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 NRKQ7Z2Y5 1582 aa3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 USP47Q96K76 1375 aa3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 MON2Q7Z3U7 1717 aa3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 IGHV3OR16-10A0A075B7F0 116 aa3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 E5RGE8 158 aa3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 E9PQ18 207 aa3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 G3V2L1 256 aa3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 KIF5CO60282 957 aa3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 ECE2O60344 883 aa3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 SORBS2O94875 1100 aaKnown RBP3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 MT-ND2P03891 347 aa3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 C4BPBP20851 252 aa3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 PIK3R1P27986 724 aa3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 PDHA2P29803 388 aa3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 RPP38P78345 283 aaKnown RBP3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 FOLH1Q04609 750 aa3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 ELAVL2Q12926 359 aaKnown RBP3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 GLIPR1L2Q4G1C9 344 aa3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 ZNF542PQ5EBM4 170 aa3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 NHSL2Q5HYW2 709 aa3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 TCEAL6Q6IPX3 200 aa3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 FBXL22Q6P050 247 aa3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 DOK6Q6PKX4 331 aa3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 LCLAT1Q6UWP7 414 aa3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 MYPOPQ86VE0 399 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 SIAH3Q8IW03 269 aa3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 KLHL7Q8IXQ5 586 aa3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 OR10G7Q8NGN6 311 aa3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 C11orf45Q8TAV5 145 aa3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 CKAP2Q8WWK9 683 aa3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 SNRNP40Q96DI7 357 aaKnown RBP3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 CNRIP1Q96F85 164 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 IWS1Q96ST2 819 aa3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 PRMT1Q99873 361 aaKnown RBP3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 VGLL1Q99990 258 aa3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 LSG1Q9H089 658 aaKnown RBP3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 PARLQ9H300 379 aa3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 NUDT4Q9NZJ9 180 aa3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 POMT2Q9UKY4 750 aa3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 GPR132Q9UNW8 380 aa3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 NSG2Q9Y328 171 aa3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 CCDC144AA2RUR9 1427 aa3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 PFASO15067 1338 aa3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 RNF123Q5XPI4 1314 aa3.17□□□□□ -1.9
HMGB1P11-201ENST00000413899 ERVK-7P63135 1459 aa3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 MARF1Q9Y4F3 1742 aaKnown RBP3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 IGHV3-20A0A0C4DH32 117 aa3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 IQCMA0A1B0GVH7 501 aa3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 TFECO14948 347 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 PGRMC2O15173 223 aa3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 MAGEB2O15479 319 aa3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 ST8SIA3O43173 380 aa3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 MTRF1O75570 445 aaKnown RBP3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 HSPA5P11021 654 aaKnown RBP3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 CCND3P30281 292 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 GPR183P32249 361 aa3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 TCF7P36402 384 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 FRKP42685 505 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 KRTAP10-7P60409 375 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 DHODHQ02127 395 aa3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 CETN1Q12798 172 aa3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 ANKRD20A4Q4UJ75 823 aa3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 ANKRD20A8PQ5CZ79 823 aa3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 ARMCX4Q5H9R4 360 aa3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 SPANXN4Q5MJ08 99 aa3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 ANKRD20A2Q5SQ80 823 aa3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 ANKRD20A1Q5TYW2 823 aa3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 ANKRD20A3Q5VUR7 823 aa3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 ZNF772Q68DY9 489 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 GDPGP1Q6ZNW5 385 aa3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 TRMT11Q7Z4G4 463 aaKnown RBP3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 CROCCP3Q8IVE0 287 aa3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 ZC3H3Q8IXZ2 948 aaKnown RBP3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 DND1Q8IYX4 353 aaKnown RBP3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 METTL4Q8N3J2 472 aa3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 TMEM99Q8N816 258 aa3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 Q8NBF4 154 aa3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 OR7G3Q8NG95 312 aa3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 SAP25Q8TEE9 199 aa3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 LRRC15Q8TF66 581 aa3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 ATOH8Q96SQ7 321 aa3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 LRRC61Q9BV99 259 aa3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 PAPOLGQ9BWT3 736 aaKnown RBP3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 FNDC4Q9H6D8 234 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 GRPEL1Q9HAV7 217 aa3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 MRPL17Q9NRX2 175 aaKnown RBP3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 PDRG1Q9NUG6 133 aa3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 PAK5Q9P286 719 aa3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 ARMCX3Q9UH62 379 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 SATB2Q9UPW6 733 aa3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 HBS1LQ9Y450 684 aaKnown RBP3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 PIK3C2GO75747 1445 aa3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 ARHGAP31Q2M1Z3 1444 aa3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 KIF7Q2M1P5 1343 aa3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 PTPRMP28827 1452 aa3.16□□□□□ -1.9
HMGB1P11-201ENST00000413899 IGHV4-30-2A0A087WSY4 118 aa3.15□□□□□ -1.91
HMGB1P11-201ENST00000413899 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms