RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 TNFSF10P50591 281 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 CLCN2P51788 898 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 CCNG1P51959 295 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 PKNOX1P55347 436 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 TRA2BP62995 288 aaKnown RBP6.01□□□□□ -1.45
USP54-202ENST00000413442 HERVK_113P63132 956 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 DLG1Q12959 904 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 IFT88Q13099 833 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 ZNF169Q14929 603 aaPredicted RBP6.01□□□□□ -1.45
USP54-202ENST00000413442 ABRAXAS2Q15018 415 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 PCOLCEQ15113 449 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 ELAVL1Q15717 326 aaKnown RBP6.01□□□□□ -1.45
USP54-202ENST00000413442 INPP5JQ15735 1006 aaPredicted RBP6.01□□□□□ -1.45
USP54-202ENST00000413442 BTBD16Q32M84 506 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 PLEKHN1Q494U1 663 aaPredicted RBP6.01□□□□□ -1.45
USP54-202ENST00000413442 KRTCAP3Q53RY4 240 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 MFSD4BQ5TF39 518 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 CPZQ66K79 652 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 SLC6A19Q695T7 634 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 EMBQ6PCB8 327 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 BNC2Q6ZN30 1099 aaPredicted RBP6.01□□□□□ -1.45
USP54-202ENST00000413442 MILR1Q7Z6M3 343 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 PDSS2Q86YH6 399 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 DND1Q8IYX4 353 aaKnown RBP6.01□□□□□ -1.45
USP54-202ENST00000413442 SAMD14Q8IZD0 417 aaPredicted RBP6.01□□□□□ -1.45
USP54-202ENST00000413442 CA13Q8N1Q1 262 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 SLC15A4Q8N697 577 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 TEX9Q8N6V9 391 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 GBP7Q8N8V2 638 aaPredicted RBP6.01□□□□□ -1.45
USP54-202ENST00000413442 OR5L2Q8NGL0 311 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 CPT1CQ8TCG5 803 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 ELP5Q8TE02 316 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 MOCOSQ96EN8 888 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 RBM18Q96H35 190 aaKnown RBP6.01□□□□□ -1.45
USP54-202ENST00000413442 PEX11GQ96HA9 241 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 SCYL1Q96KG9 808 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 PHF12Q96QT6 1004 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 ERVK-6Q9BXR3 956 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 MS4A8Q9BY19 250 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 DDX31Q9H8H2 851 aaKnown RBP6.01□□□□□ -1.45
USP54-202ENST00000413442 TRIM45Q9H8W5 580 aaPredicted RBP6.01□□□□□ -1.45
USP54-202ENST00000413442 KCNK13Q9HB14 408 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 ADAP2Q9NPF8 381 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 PRTFDC1Q9NRG1 225 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 LYARQ9NX58 379 aaKnown RBP6.01□□□□□ -1.45
USP54-202ENST00000413442 KCMF1Q9P0J7 381 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 VTI1BQ9UEU0 232 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 SH2B3Q9UQQ2 575 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 CPAMD8Q8IZJ3 1885 aa6□□□□□ -1.45
USP54-202ENST00000413442 PIEZO2Q9H5I5 2752 aa6□□□□□ -1.45
USP54-202ENST00000413442 OR5H15A6NDH6 313 aa6□□□□□ -1.45
USP54-202ENST00000413442 SAGE2PA6NJ88 616 aa6□□□□□ -1.45
USP54-202ENST00000413442 CYR61O00622 381 aa6□□□□□ -1.45
USP54-202ENST00000413442 KALRNO60229 2985 aa6□□□□□ -1.45
USP54-202ENST00000413442 GLRA3O75311 464 aa6□□□□□ -1.45
USP54-202ENST00000413442 RDH16O75452 317 aa6□□□□□ -1.45
USP54-202ENST00000413442 PIAS1O75925 651 aa6□□□□□ -1.45
USP54-202ENST00000413442 ZFAND5O76080 213 aa6□□□□□ -1.45
USP54-202ENST00000413442 KRT6AP02538 564 aa6□□□□□ -1.45
USP54-202ENST00000413442 KRT6BP04259 564 aa6□□□□□ -1.45
USP54-202ENST00000413442 ENO1P06733 434 aaKnown RBP6□□□□□ -1.45
USP54-202ENST00000413442 UQCRHP07919 91 aa6□□□□□ -1.45
USP54-202ENST00000413442 RHOXF2BP0C7M4 288 aa6□□□□□ -1.45
USP54-202ENST00000413442 EDN3P14138 238 aa6□□□□□ -1.45
USP54-202ENST00000413442 CD46P15529 392 aa6□□□□□ -1.45
USP54-202ENST00000413442 EPORP19235 508 aa6□□□□□ -1.45
USP54-202ENST00000413442 ATP5A1P25705 553 aaKnown RBP6□□□□□ -1.45
USP54-202ENST00000413442 TRHRP34981 398 aaPredicted RBP6□□□□□ -1.45
USP54-202ENST00000413442 GLRBP48167 497 aa6□□□□□ -1.45
USP54-202ENST00000413442 KRT6CP48668 564 aa6□□□□□ -1.45
USP54-202ENST00000413442 RAP1GDS1P52306 607 aa6□□□□□ -1.45
USP54-202ENST00000413442 PRKAA2P54646 552 aa6□□□□□ -1.45
USP54-202ENST00000413442 LIM2P55344 173 aa6□□□□□ -1.45
USP54-202ENST00000413442 SLC26A5P58743 744 aa6□□□□□ -1.45
USP54-202ENST00000413442 RAB8AP61006 207 aa6□□□□□ -1.45
USP54-202ENST00000413442 PSPHP78330 225 aa6□□□□□ -1.45
USP54-202ENST00000413442 ARG2P78540 354 aa6□□□□□ -1.45
USP54-202ENST00000413442 MAT1AQ00266 395 aaKnown RBP6□□□□□ -1.45
USP54-202ENST00000413442 STX4Q12846 297 aa6□□□□□ -1.45
USP54-202ENST00000413442 ELOAQ14241 798 aaKnown RBP6□□□□□ -1.45
USP54-202ENST00000413442 SFT2D3Q587I9 215 aa6□□□□□ -1.45
USP54-202ENST00000413442 ACER2Q5QJU3 275 aa6□□□□□ -1.45
USP54-202ENST00000413442 MTFR2Q6P444 385 aa6□□□□□ -1.45
USP54-202ENST00000413442 PAPD4Q6PIY7 484 aaKnown RBP6□□□□□ -1.45
USP54-202ENST00000413442 SHISA6Q6ZSJ9 500 aa6□□□□□ -1.45
USP54-202ENST00000413442 GPR180Q86V85 440 aa6□□□□□ -1.45
USP54-202ENST00000413442 RPS19BP1Q86WX3 136 aaKnown RBP6□□□□□ -1.45
USP54-202ENST00000413442 SCUBE1Q8IWY4 988 aa6□□□□□ -1.45
USP54-202ENST00000413442 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6□□□□□ -1.45
USP54-202ENST00000413442 KIRREL3Q8IZU9 778 aa6□□□□□ -1.45
USP54-202ENST00000413442 SPATA6LQ8N4H0 392 aa6□□□□□ -1.45
USP54-202ENST00000413442 METTL27Q8N6F8 245 aaPredicted RBP6□□□□□ -1.45
USP54-202ENST00000413442 BCORP1Q8N888 145 aa6□□□□□ -1.45
USP54-202ENST00000413442 ACOT4Q8N9L9 421 aa6□□□□□ -1.45
USP54-202ENST00000413442 POGLUT1Q8NBL1 392 aa6□□□□□ -1.45
USP54-202ENST00000413442 TMEM178AQ8NBL3 297 aa6□□□□□ -1.45
USP54-202ENST00000413442 B3GNT7Q8NFL0 401 aa6□□□□□ -1.45
USP54-202ENST00000413442 OR14A16Q8NHC5 309 aa6□□□□□ -1.45
USP54-202ENST00000413442 ZCCHC10Q8TBK6 192 aa6□□□□□ -1.45
USP54-202ENST00000413442 WDR20Q8TBZ3 569 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms