RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 NPC1L1Q9UHC9 1359 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 PTPRCP08575 1304 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 MROH5Q6ZUA9 1318 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 hDV102S1A0JD36 115 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 GOLGA6L9A6NEM1 432 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 ASB14A6NK59 587 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 E5RGE8 158 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 M0QX08 132 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 PDXKO00764 312 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 DNALI1O14645 258 aaPredicted RBP4.15□□□□□ -1.75
BRCA1-204ENST00000412061 ZNF208O43345 1280 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 GRAP2O75791 330 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 GAGE7O76087 117 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 CRYABP02511 175 aaKnown RBP4.15□□□□□ -1.75
BRCA1-204ENST00000412061 KRT19P08727 400 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 POLR2MP0CAP2 368 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 GAGE12FP0CL80 117 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 GAGE12GP0CL81 117 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 GAGE12IP0CL82 117 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 EZRP15311 586 aaKnown RBP4.15□□□□□ -1.75
BRCA1-204ENST00000412061 NCF2P19878 526 aaPredicted RBP4.15□□□□□ -1.75
BRCA1-204ENST00000412061 DGKAP23743 735 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 DPP4P27487 766 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 CCT6AP40227 531 aaKnown RBP4.15□□□□□ -1.75
BRCA1-204ENST00000412061 ETV1P50549 477 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 VAMP7P51809 220 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 SEC61BP60468 96 aaKnown RBP4.15□□□□□ -1.75
BRCA1-204ENST00000412061 CBX1P83916 185 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 ZXDBP98169 803 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 PDE1BQ01064 536 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 EEF1A2Q05639 463 aaKnown RBP4.15□□□□□ -1.75
BRCA1-204ENST00000412061 TRAF2Q12933 501 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 GAGE1Q13065 139 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 GAGE4Q13068 117 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 KEAP1Q14145 624 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 PDK3Q15120 406 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 DPYSL2Q16555 572 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 ZC2HC1CQ53FD0 456 aaPredicted RBP4.15□□□□□ -1.75
BRCA1-204ENST00000412061 ZNF542PQ5EBM4 170 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 ARMCX4Q5H9R4 360 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 LIPKQ5VXJ0 399 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 BLOC1S2Q6QNY1 142 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 CDHR3Q6ZTQ4 885 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 PAQR9Q6ZVX9 377 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 C1QL2Q7Z5L3 287 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 YRDCQ86U90 279 aaKnown RBP4.15□□□□□ -1.75
BRCA1-204ENST00000412061 ZDHHC17Q8IUH5 632 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 PSTKQ8IV42 348 aaKnown RBP4.15□□□□□ -1.75
BRCA1-204ENST00000412061 CHERPQ8IWX8 916 aaKnown RBP4.15□□□□□ -1.75
BRCA1-204ENST00000412061 ZNF34Q8IZ26 560 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 PDCL2Q8N4E4 241 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 ARL14Q8N4G2 192 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 CPSF7Q8N684 471 aaKnown RBP4.15□□□□□ -1.75
BRCA1-204ENST00000412061 TRPV3Q8NET8 790 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 FGFBP3Q8TAT2 258 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 MAGEC3Q8TD91 643 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 GIPC3Q8TF64 312 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 ASB5Q8WWX0 329 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 IRGQQ8WZA9 623 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 GLYATL1Q969I3 302 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 TSACCQ96A04 125 aaPredicted RBP4.15□□□□□ -1.75
BRCA1-204ENST00000412061 MRPL53Q96EL3 112 aaKnown RBP4.15□□□□□ -1.75
BRCA1-204ENST00000412061 SLC41A3Q96GZ6 507 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 OXNAD1Q96HP4 312 aaPredicted RBP4.15□□□□□ -1.75
BRCA1-204ENST00000412061 FAM20AQ96MK3 541 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 PRICKLE1Q96MT3 831 aaPredicted RBP4.15□□□□□ -1.75
BRCA1-204ENST00000412061 FCRL4Q96PJ5 515 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 ALKBH7Q9BT30 221 aaPredicted RBP4.15□□□□□ -1.75
BRCA1-204ENST00000412061 LRRC2Q9BYS8 371 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 PKIBQ9C010 78 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 VN1R1Q9GZP7 353 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 FANCEQ9HB96 536 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 MIS18AQ9NYP9 233 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 C1RLQ9NZP8 487 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 DAPK2Q9UIK4 370 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 MYO6Q9UM54 1294 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 FOXJ3Q9UPW0 622 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 ERVK-19Q9WJR5 959 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 NSG2Q9Y328 171 aa4.15□□□□□ -1.75
BRCA1-204ENST00000412061 CUX2O14529 1486 aa4.14□□□□□ -1.75
BRCA1-204ENST00000412061 CCDC162PA2VCL2 907 aa4.14□□□□□ -1.75
BRCA1-204ENST00000412061 ANTXRLA6NF34 631 aa4.14□□□□□ -1.75
BRCA1-204ENST00000412061 C15orf62A8K5M9 175 aa4.14□□□□□ -1.75
BRCA1-204ENST00000412061 ZNF197O14709 1029 aa4.14□□□□□ -1.75
BRCA1-204ENST00000412061 CASC3O15234 703 aaKnown RBP4.14□□□□□ -1.75
BRCA1-204ENST00000412061 EXTL3O43909 919 aa4.14□□□□□ -1.75
BRCA1-204ENST00000412061 EPOP01588 193 aa4.14□□□□□ -1.75
BRCA1-204ENST00000412061 MT-ND1P03886 318 aa4.14□□□□□ -1.75
BRCA1-204ENST00000412061 H1F0P07305 194 aaKnown RBP4.14□□□□□ -1.75
BRCA1-204ENST00000412061 TPM1P09493 284 aa4.14□□□□□ -1.75
BRCA1-204ENST00000412061 HOXC6P09630 235 aa4.14□□□□□ -1.75
BRCA1-204ENST00000412061 CDK4P11802 303 aa4.14□□□□□ -1.75
BRCA1-204ENST00000412061 CCDC130P13994 396 aa4.14□□□□□ -1.75
BRCA1-204ENST00000412061 ALDH1B1P30837 517 aa4.14□□□□□ -1.75
BRCA1-204ENST00000412061 SRD5A2P31213 254 aa4.14□□□□□ -1.75
BRCA1-204ENST00000412061 DUTP33316 252 aaKnown RBP4.14□□□□□ -1.75
BRCA1-204ENST00000412061 OR1G1P47890 313 aa4.14□□□□□ -1.75
BRCA1-204ENST00000412061 RPP38P78345 283 aaKnown RBP4.14□□□□□ -1.75
BRCA1-204ENST00000412061 ARHGAP19Q14CB8 494 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms