RNA–Protein interactions for RNA: ENST00000411809.6

CLINT1-201, Transcript of clathrin interactor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLINT1, Length 3,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-201ENST00000411809 ARHGEF33A8MVX0 844 aa12.48□□□□□ -0.41
CLINT1-201ENST00000411809 NEDD8-MDP1E9PL57 170 aa12.48□□□□□ -0.41
CLINT1-201ENST00000411809 KLHL18O94889 574 aa12.48□□□□□ -0.41
CLINT1-201ENST00000411809 CXCL14O95715 111 aa12.48□□□□□ -0.41
CLINT1-201ENST00000411809 CSF2P04141 144 aa12.48□□□□□ -0.41
CLINT1-201ENST00000411809 EIF2S1P05198 315 aaKnown RBP12.48□□□□□ -0.41
CLINT1-201ENST00000411809 ADORA3P0DMS8 318 aa12.48□□□□□ -0.41
CLINT1-201ENST00000411809 HOXD11P31277 338 aaPredicted RBP12.48□□□□□ -0.41
CLINT1-201ENST00000411809 MMP12P39900 470 aa12.48□□□□□ -0.41
CLINT1-201ENST00000411809 PRLHRP49683 370 aa12.48□□□□□ -0.41
CLINT1-201ENST00000411809 TBRG1Q3YBR2 411 aa12.48□□□□□ -0.41
CLINT1-201ENST00000411809 SLC46A3Q7Z3Q1 461 aa12.48□□□□□ -0.41
CLINT1-201ENST00000411809 ZNF605Q86T29 641 aa12.48□□□□□ -0.41
CLINT1-201ENST00000411809 TRIM48Q8IWZ4 208 aa12.48□□□□□ -0.41
CLINT1-201ENST00000411809 SLC5A8Q8N695 610 aa12.48□□□□□ -0.41
CLINT1-201ENST00000411809 MRPL43Q8N983 215 aaKnown RBP12.48□□□□□ -0.41
CLINT1-201ENST00000411809 KBTBD8Q8NFY9 601 aa12.48□□□□□ -0.41
CLINT1-201ENST00000411809 OR56A3Q8NH54 315 aa12.48□□□□□ -0.41
CLINT1-201ENST00000411809 IPCEF1Q8WWN9 437 aaPredicted RBP12.48□□□□□ -0.41
CLINT1-201ENST00000411809 SCAMP4Q969E2 229 aa12.48□□□□□ -0.41
CLINT1-201ENST00000411809 POP5Q969H6 163 aaKnown RBP12.48□□□□□ -0.41
CLINT1-201ENST00000411809 WDR34Q96EX3 536 aa12.48□□□□□ -0.41
CLINT1-201ENST00000411809 ZSWIM3Q96MP5 696 aa12.48□□□□□ -0.41
CLINT1-201ENST00000411809 LRRC3BQ96PB8 259 aa12.48□□□□□ -0.41
CLINT1-201ENST00000411809 TDP1Q9NUW8 608 aa12.48□□□□□ -0.41
CLINT1-201ENST00000411809 RAPGEFL1Q9UHV5 662 aa12.48□□□□□ -0.41
CLINT1-201ENST00000411809 SLC22A14Q9Y267 594 aa12.48□□□□□ -0.41
CLINT1-201ENST00000411809 PNMA8CA0A1B0GUJ8 204 aa12.48□□□□□ -0.41
CLINT1-201ENST00000411809 KPNA5O15131 536 aa12.48□□□□□ -0.41
CLINT1-201ENST00000411809 LEFTY1O75610 366 aa12.48□□□□□ -0.41
CLINT1-201ENST00000411809 KCNK5O95279 499 aa12.48□□□□□ -0.41
CLINT1-201ENST00000411809 FHP07954 510 aa12.48□□□□□ -0.41
CLINT1-201ENST00000411809 RGS6P49758 472 aa12.48□□□□□ -0.41
CLINT1-201ENST00000411809 ZNF45Q02386 682 aa12.48□□□□□ -0.41
CLINT1-201ENST00000411809 FRG2Q64ET8 278 aa12.48□□□□□ -0.41
CLINT1-201ENST00000411809 LRRC56Q8IYG6 542 aaPredicted RBP12.48□□□□□ -0.41
CLINT1-201ENST00000411809 KIAA1958Q8N8K9 716 aa12.48□□□□□ -0.41
CLINT1-201ENST00000411809 RASGEF1AQ8N9B8 481 aa12.48□□□□□ -0.41
CLINT1-201ENST00000411809 FBXO15Q8NCQ5 510 aaPredicted RBP12.48□□□□□ -0.41
CLINT1-201ENST00000411809 UBASH3BQ8TF42 649 aa12.48□□□□□ -0.41
CLINT1-201ENST00000411809 FRG2BQ96QU4 278 aa12.48□□□□□ -0.41
CLINT1-201ENST00000411809 CITED4Q96RK1 184 aa12.48□□□□□ -0.41
CLINT1-201ENST00000411809 ATG10Q9H0Y0 220 aa12.48□□□□□ -0.41
CLINT1-201ENST00000411809 SPASTQ9UBP0 616 aa12.48□□□□□ -0.41
CLINT1-201ENST00000411809 MYO9BQ13459 2157 aa12.48□□□□□ -0.41
CLINT1-201ENST00000411809 C1orf226A1L170 272 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 PRMT3O60678 531 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 EPN2O95208 641 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 POU2F2P09086 479 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 COX7A2P14406 83 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 HOXB6P17509 224 aaKnown RBP12.47□□□□□ -0.41
CLINT1-201ENST00000411809 SYN1P17600 705 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 GPX2P18283 190 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 ETV3P41162 512 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 PIK3CBP42338 1070 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 HTR3AP46098 478 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 CDH12P55289 794 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 POLR2LP62875 67 aaKnown RBP12.47□□□□□ -0.41
CLINT1-201ENST00000411809 SLAMF1Q13291 335 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 CAMK1Q14012 370 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 IRF3Q14653 427 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 CCDC85BQ15834 202 aaPredicted RBP12.47□□□□□ -0.41
CLINT1-201ENST00000411809 NOXRED1Q6NXP6 359 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 PTOV1Q86YD1 416 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 SYT12Q8IV01 421 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 SIX5Q8N196 739 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.47□□□□□ -0.414e-7■■□□□ 11.5
CLINT1-201ENST00000411809 MYDGFQ969H8 173 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 TP53INP1Q96A56 240 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 COQ10AQ96MF6 247 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 FYTTD1Q96QD9 318 aaKnown RBP12.47□□□□□ -0.41
CLINT1-201ENST00000411809 YME1L1Q96TA2 773 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 DNAJC11Q9NVH1 559 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 MS4A12Q9NXJ0 267 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 TAS2R9Q9NYW1 312 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 MUTYHQ9UIF7 546 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 PSORS1C1Q9UIG5 152 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 DUSP12Q9UNI6 340 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 EXO1Q9UQ84 846 aaKnown RBP12.47□□□□□ -0.41
CLINT1-201ENST00000411809 SH3BP5O60239 455 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 CKMT1AP12532 417 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 CD83Q01151 205 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 HSPA14Q0VDF9 509 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 CAMK2BQ13554 666 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 GAB4Q2WGN9 574 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 CCDC58Q4VC31 144 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 DEPDC4Q8N2C3 294 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 DNAJC22Q8N4W6 341 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 ZNF557Q8N988 423 aaPredicted RBP12.47□□□□□ -0.41
CLINT1-201ENST00000411809 OR9Q2Q8NGE9 314 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 BTN2A2Q8WVV5 523 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 SH3KBP1Q96B97 665 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 ASIC4Q96FT7 647 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 MTERF1Q99551 399 aaKnown RBP12.47□□□□□ -0.41
CLINT1-201ENST00000411809 ZSCAN5AQ9BUG6 496 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 FAM83DQ9H4H8 585 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 EPHX3Q9H6B9 360 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 KLHL20Q9Y2M5 609 aa12.47□□□□□ -0.41
CLINT1-201ENST00000411809 ASCC3Q8N3C0 2202 aaKnown RBP12.47□□□□□ -0.41
CLINT1-201ENST00000411809 CLCA1A8K7I4 914 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms