RNA–Protein interactions for RNA: ENST00000409617.5

SERF2-208, Transcript of small EDRK-rich factor 2, human

TSL 2

Gene SERF2, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SERF2-208	ENST00000409617	LHX6	Q9UPM6	363 aa		13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	HS3ST3B1	Q9Y662	390 aa		13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	KCNMB2	Q9Y691	235 aa		13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	CFAP47	Q6ZTR5	3102 aa		13.94	□□□□□ -0.18
SERF2-208	ENST00000409617	SAP18	O00422	153 aa	Known RBP	13.93	□□□□□ -0.18
SERF2-208	ENST00000409617	RTCA	O00442	366 aa	Known RBP	13.93	□□□□□ -0.18
SERF2-208	ENST00000409617	PLPP1	O14494	284 aa		13.93	□□□□□ -0.18
SERF2-208	ENST00000409617	SOCS6	O14544	535 aa		13.93	□□□□□ -0.18
SERF2-208	ENST00000409617	ULK1	O75385	1050 aa		13.93	□□□□□ -0.18
SERF2-208	ENST00000409617	JRK	O75564	520 aa		13.93	□□□□□ -0.18
SERF2-208	ENST00000409617	SEMA3D	O95025	777 aa		13.93	□□□□□ -0.18
SERF2-208	ENST00000409617	HEXB	P07686	556 aa		13.93	□□□□□ -0.18
SERF2-208	ENST00000409617	FH	P07954	510 aa		13.93	□□□□□ -0.18
SERF2-208	ENST00000409617	RNH1	P13489	461 aa	Known RBP	13.93	□□□□□ -0.18
SERF2-208	ENST00000409617	HIST1H1T	P22492	207 aa	Predicted RBP	13.93	□□□□□ -0.18
SERF2-208	ENST00000409617	CERS1	P27544	350 aa		13.93	□□□□□ -0.18
SERF2-208	ENST00000409617	HMOX2	P30519	316 aa		13.93	□□□□□ -0.18
SERF2-208	ENST00000409617	BSG	P35613	385 aa		13.93	□□□□□ -0.18
SERF2-208	ENST00000409617	RAP1GDS1	P52306	607 aa		13.93	□□□□□ -0.18
SERF2-208	ENST00000409617	EFNA3	P52797	238 aa		13.93	□□□□□ -0.18
SERF2-208	ENST00000409617	TUBB8	Q3ZCM7	444 aa		13.93	□□□□□ -0.18
SERF2-208	ENST00000409617	SGO1	Q5FBB7	561 aa		13.93	□□□□□ -0.18
SERF2-208	ENST00000409617	BORA	Q6PGQ7	559 aa		13.93	□□□□□ -0.18
SERF2-208	ENST00000409617	TMEM205	Q6UW68	189 aa		13.93	□□□□□ -0.18
SERF2-208	ENST00000409617	KIRREL2	Q6UWL6	708 aa		13.93	□□□□□ -0.18
SERF2-208	ENST00000409617	NUDCD3	Q8IVD9	361 aa		13.93	□□□□□ -0.18
SERF2-208	ENST00000409617	APLF	Q8IW19	511 aa	Predicted RBP	13.93	□□□□□ -0.18
SERF2-208	ENST00000409617	HOMEZ	Q8IX15	550 aa		13.93	□□□□□ -0.18
SERF2-208	ENST00000409617	ZCCHC7	Q8N3Z6	543 aa	Known RBP	13.93	□□□□□ -0.18
SERF2-208	ENST00000409617	ADAMTS18	Q8TE60	1221 aa		13.93	□□□□□ -0.18
SERF2-208	ENST00000409617	ARL8A	Q96BM9	186 aa		13.93	□□□□□ -0.18
SERF2-208	ENST00000409617	ZNF717	Q9BY31	904 aa	Predicted RBP	13.93	□□□□□ -0.18
SERF2-208	ENST00000409617	VN1R1	Q9GZP7	353 aa		13.93	□□□□□ -0.18
SERF2-208	ENST00000409617	DDX31	Q9H8H2	851 aa	Known RBP	13.93	□□□□□ -0.18
SERF2-208	ENST00000409617	LYRM4	Q9HD34	91 aa		13.93	□□□□□ -0.18
SERF2-208	ENST00000409617	P4HTM	Q9NXG6	502 aa		13.93	□□□□□ -0.18
SERF2-208	ENST00000409617	KCMF1	Q9P0J7	381 aa		13.93	□□□□□ -0.18
SERF2-208	ENST00000409617	MKL2	Q9ULH7	1088 aa		13.93	□□□□□ -0.18
SERF2-208	ENST00000409617	DAPP1	Q9UN19	280 aa		13.93	□□□□□ -0.18
SERF2-208	ENST00000409617	MAN2B2	Q9Y2E5	1009 aa		13.93	□□□□□ -0.18
SERF2-208	ENST00000409617	TIMM22	Q9Y584	194 aa		13.93	□□□□□ -0.18
SERF2-208	ENST00000409617	LOC102723996	A0A087X1L8	192 aa		13.92	□□□□□ -0.18
SERF2-208	ENST00000409617		A0A1W2PQ72	361 aa		13.92	□□□□□ -0.18
SERF2-208	ENST00000409617	TMEM120B	A0PK00	339 aa		13.92	□□□□□ -0.18
SERF2-208	ENST00000409617	PEX12	O00623	359 aa		13.92	□□□□□ -0.18
SERF2-208	ENST00000409617	FGF4	P08620	206 aa		13.92	□□□□□ -0.18
SERF2-208	ENST00000409617	JAK1	P23458	1154 aa		13.92	□□□□□ -0.18
SERF2-208	ENST00000409617	SSR2	P43308	183 aa		13.92	□□□□□ -0.18
SERF2-208	ENST00000409617	FOXA1	P55317	472 aa		13.92	□□□□□ -0.18
SERF2-208	ENST00000409617	LIM2	P55344	173 aa		13.92	□□□□□ -0.18
SERF2-208	ENST00000409617	RAB38	P57729	211 aa		13.92	□□□□□ -0.18
SERF2-208	ENST00000409617	RHAG	Q02094	409 aa		13.92	□□□□□ -0.18
SERF2-208	ENST00000409617	CSTF3	Q12996	717 aa	Known RBP	13.92	□□□□□ -0.18
SERF2-208	ENST00000409617	ATP1A4	Q13733	1029 aa		13.92	□□□□□ -0.18
SERF2-208	ENST00000409617	RCN2	Q14257	317 aa		13.92	□□□□□ -0.18
SERF2-208	ENST00000409617	LINC00303	Q3SY05	128 aa		13.92	□□□□□ -0.18
SERF2-208	ENST00000409617	ARL13A	Q5H913	290 aa	Predicted RBP	13.92	□□□□□ -0.18
SERF2-208	ENST00000409617	TCHHL1	Q5QJ38	904 aa	Predicted RBP	13.92	□□□□□ -0.18
SERF2-208	ENST00000409617	FAM219B	Q5XKK7	198 aa		13.92	□□□□□ -0.18
SERF2-208	ENST00000409617	GBP7	Q8N8V2	638 aa	Predicted RBP	13.92	□□□□□ -0.18
SERF2-208	ENST00000409617	TMEM102	Q8N9M5	508 aa	Predicted RBP	13.92	□□□□□ -0.18
SERF2-208	ENST00000409617	APOBEC4	Q8WW27	367 aa	Known RBP	13.92	□□□□□ -0.18
SERF2-208	ENST00000409617	VPS50	Q96JG6	964 aa		13.92	□□□□□ -0.18
SERF2-208	ENST00000409617	ATP6V1G3	Q96LB4	118 aa		13.92	□□□□□ -0.18
SERF2-208	ENST00000409617	KCNA7	Q96RP8	456 aa		13.92	□□□□□ -0.18
SERF2-208	ENST00000409617	EML4	Q9HC35	981 aa	Known RBP	13.92	□□□□□ -0.18
SERF2-208	ENST00000409617	TNFRSF12A	Q9NP84	129 aa		13.92	□□□□□ -0.18
SERF2-208	ENST00000409617	NMRK1	Q9NWW6	199 aa		13.92	□□□□□ -0.18
SERF2-208	ENST00000409617	AHSP	Q9NZD4	102 aa		13.92	□□□□□ -0.18
SERF2-208	ENST00000409617	KMT2B	Q9UMN6	2715 aa	Predicted RBP	13.92	□□□□□ -0.18
SERF2-208	ENST00000409617	FAM227A	F5H4B4	570 aa		13.91	□□□□□ -0.18
SERF2-208	ENST00000409617	ERVH48-1	M5A8F1	160 aa		13.91	□□□□□ -0.18
SERF2-208	ENST00000409617	PSMD12	O00232	456 aa	Predicted RBP	13.91	□□□□□ -0.18
SERF2-208	ENST00000409617	CYR61	O00622	381 aa		13.91	□□□□□ -0.18
SERF2-208	ENST00000409617	ALOX12B	O75342	701 aa		13.91	□□□□□ -0.18
SERF2-208	ENST00000409617	UROS	P10746	265 aa		13.91	□□□□□ -0.18
SERF2-208	ENST00000409617	HTR6	P50406	440 aa		13.91	□□□□□ -0.18
SERF2-208	ENST00000409617	WDR4	P57081	412 aa	Known RBP	13.91	□□□□□ -0.18
SERF2-208	ENST00000409617	TBL3	Q12788	808 aa	Known RBP	13.91	□□□□□ -0.18
SERF2-208	ENST00000409617	ABRAXAS2	Q15018	415 aa		13.91	□□□□□ -0.18
SERF2-208	ENST00000409617	MINDY4	Q4G0A6	757 aa		13.91	□□□□□ -0.18
SERF2-208	ENST00000409617	MRM1	Q6IN84	353 aa	Known RBP	13.91	□□□□□ -0.18
SERF2-208	ENST00000409617	QSOX2	Q6ZRP7	698 aa		13.91	□□□□□ -0.18
SERF2-208	ENST00000409617	ZCCHC23	Q6ZST2	131 aa		13.91	□□□□□ -0.18
SERF2-208	ENST00000409617	CUZD1	Q86UP6	607 aa		13.91	□□□□□ -0.18
SERF2-208	ENST00000409617	METTL4	Q8N3J2	472 aa		13.91	□□□□□ -0.18
SERF2-208	ENST00000409617	OR11G2	Q8NGC1	345 aa		13.91	□□□□□ -0.18
SERF2-208	ENST00000409617	EXTL1	Q92935	676 aa		13.91	□□□□□ -0.18
SERF2-208	ENST00000409617	WBP1	Q96G27	269 aa		13.91	□□□□□ -0.18
SERF2-208	ENST00000409617	FER1L6-AS2	Q96M78	137 aa		13.91	□□□□□ -0.18
SERF2-208	ENST00000409617	SORBS1	Q9BX66	1292 aa	Known RBP	13.91	□□□□□ -0.18
SERF2-208	ENST00000409617	SHCBP1L	Q9BZQ2	653 aa		13.91	□□□□□ -0.18
SERF2-208	ENST00000409617	VPS29	Q9UBQ0	182 aa		13.91	□□□□□ -0.18
SERF2-208	ENST00000409617	ADAM29	Q9UKF5	820 aa		13.91	□□□□□ -0.18
SERF2-208	ENST00000409617	SLC12A4	Q9UP95	1085 aa		13.91	□□□□□ -0.18
SERF2-208	ENST00000409617	MMACHC	Q9Y4U1	282 aa		13.91	□□□□□ -0.18
SERF2-208	ENST00000409617	PCSK5	Q92824	1860 aa		13.91	□□□□□ -0.18
SERF2-208	ENST00000409617		A0A0A6YYD5	115 aa		13.9	□□□□□ -0.18
SERF2-208	ENST00000409617	WDR91	A4D1P6	747 aa		13.9	□□□□□ -0.18
SERF2-208	ENST00000409617	BLACE	A4D250	179 aa		13.9	□□□□□ -0.18

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