RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 GNRH1P01148 92 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 CHMP24386 653 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 TEKQ02763 1124 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 SSX1Q16384 188 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 DGUOKQ16854 277 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 RNF130Q86XS8 419 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 C11orf65Q8NCR3 313 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 FGF11Q92914 225 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 UCN3Q969E3 161 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 SLC35B4Q969S0 331 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 DCSTAMPQ9H295 470 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 SERHL2Q9H4I8 314 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 MYNNQ9NPC7 610 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 SCN3BQ9NY72 215 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 DKK3Q9UBP4 350 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 IL36AQ9UHA7 158 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 LSM2Q9Y333 95 aaKnown RBP9.41□□□□□ -0.9
MSH2-202ENST00000406134 ZAR1LA6NP61 321 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 TLL1O43897 1013 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 ATG13O75143 517 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 TGFB1P01137 390 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 ERVFC1P60507 584 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 SCARB2Q14108 478 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 SLBPQ14493 270 aaKnown RBP eCLIP9.41□□□□□ -0.9
MSH2-202ENST00000406134 GAB4Q2WGN9 574 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 ZNF805Q5CZA5 627 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 TCEAL5Q5H9L2 206 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 TMEM220Q6QAJ8 160 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 FAM129CQ86XR2 697 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 METTL4Q8N3J2 472 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 SVOPQ8N4V2 548 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 OR5M11Q96RB7 305 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 EMILIN2Q9BXX0 1053 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 AICDAQ9GZX7 198 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 CXorf36Q9H7Y0 433 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 SLC25A19Q9HC21 320 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 MARK1Q9P0L2 795 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 GASTP01350 101 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 IGFBP1P08833 259 aaPredicted RBP9.41□□□□□ -0.9
MSH2-202ENST00000406134 ARAFP10398 606 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 CYP2A6P11509 494 aaPredicted RBP9.41□□□□□ -0.9
MSH2-202ENST00000406134 PBLDP30039 288 aaPredicted RBP9.41□□□□□ -0.9
MSH2-202ENST00000406134 CDH12P55289 794 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 POLR2LP62875 67 aaKnown RBP9.41□□□□□ -0.9
MSH2-202ENST00000406134 CDC20Q12834 499 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 ELOAQ14241 798 aaKnown RBP9.41□□□□□ -0.9
MSH2-202ENST00000406134 SEC23BQ15437 767 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 TEAD4Q15561 434 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 ANXA8L1Q5VT79 327 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 STEAP3Q658P3 488 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 LGI4Q8N135 537 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 B3GNT7Q8NFL0 401 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 ZNF675Q8TD23 568 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 RSPRY1Q96DX4 576 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 DTD2Q96FN9 168 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 ZDHHC5Q9C0B5 715 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.41□□□□□ -0.9
MSH2-202ENST00000406134 WNT6Q9Y6F9 365 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 KPNA4O00629 521 aaPredicted RBP9.4□□□□□ -0.9
MSH2-202ENST00000406134 UPK1BO75841 260 aa9.4□□□□□ -0.9
MSH2-202ENST00000406134 ERGP11308 486 aa9.4□□□□□ -0.9
MSH2-202ENST00000406134 CRATP43155 626 aa9.4□□□□□ -0.9
MSH2-202ENST00000406134 ARHGDIAP52565 204 aa9.4□□□□□ -0.9
MSH2-202ENST00000406134 PPP5CP53041 499 aa9.4□□□□□ -0.9
MSH2-202ENST00000406134 TIGD6Q17RP2 521 aa9.4□□□□□ -0.9
MSH2-202ENST00000406134 FLYWCH1Q4VC44 716 aa9.4□□□□□ -0.9
MSH2-202ENST00000406134 RPS26P11Q5JNZ5 115 aaPredicted RBP9.4□□□□□ -0.9
MSH2-202ENST00000406134 MED27Q6P2C8 311 aa9.4□□□□□ -0.9
MSH2-202ENST00000406134 SLC22A16Q86VW1 577 aa9.4□□□□□ -0.9
MSH2-202ENST00000406134 PAF1Q8N7H5 531 aa9.4□□□□□ -0.9
MSH2-202ENST00000406134 KREMEN2Q8NCW0 462 aa9.4□□□□□ -0.9
MSH2-202ENST00000406134 TRMT61AQ96FX7 289 aaKnown RBP9.4□□□□□ -0.9
MSH2-202ENST00000406134 TOX2Q96NM4 488 aa9.4□□□□□ -0.9
MSH2-202ENST00000406134 SLC6A16Q9GZN6 736 aa9.4□□□□□ -0.9
MSH2-202ENST00000406134 SIRT3Q9NTG7 399 aaPredicted RBP9.4□□□□□ -0.9
MSH2-202ENST00000406134 ADPRHL2Q9NX46 363 aa9.4□□□□□ -0.9
MSH2-202ENST00000406134 NDOR1Q9UHB4 597 aa9.4□□□□□ -0.9
MSH2-202ENST00000406134 ICKQ9UPZ9 632 aa9.4□□□□□ -0.9
MSH2-202ENST00000406134 CORO2BQ9UQ03 480 aa9.4□□□□□ -0.9
MSH2-202ENST00000406134 SPEGQ15772 3267 aa9.4□□□□□ -0.9
MSH2-202ENST00000406134 AGAP5A6NIR3 686 aa9.4□□□□□ -0.9
MSH2-202ENST00000406134 M0R3G1 203 aa9.4□□□□□ -0.9
MSH2-202ENST00000406134 PLK4O00444 970 aa9.4□□□□□ -0.9
MSH2-202ENST00000406134 EPPINO95925 133 aa9.4□□□□□ -0.9
MSH2-202ENST00000406134 LRG1P02750 347 aa9.4□□□□□ -0.9
MSH2-202ENST00000406134 VASPP50552 380 aaPredicted RBP9.4□□□□□ -0.9
MSH2-202ENST00000406134 TAS2R50P59544 299 aa9.4□□□□□ -0.9
MSH2-202ENST00000406134 NTHL1P78549 312 aa9.4□□□□□ -0.9
MSH2-202ENST00000406134 SLC13A2Q13183 592 aa9.4□□□□□ -0.9
MSH2-202ENST00000406134 SELENBP1Q13228 472 aa9.4□□□□□ -0.9
MSH2-202ENST00000406134 PTGES3Q15185 160 aaKnown RBP9.4□□□□□ -0.9
MSH2-202ENST00000406134 TRIM16LQ309B1 348 aa9.4□□□□□ -0.9
MSH2-202ENST00000406134 PAGE2Q7Z2X7 111 aa9.4□□□□□ -0.9
MSH2-202ENST00000406134 LACC1Q8IV20 430 aa9.4□□□□□ -0.9
MSH2-202ENST00000406134 ANKRD53Q8N9V6 530 aa9.4□□□□□ -0.9
MSH2-202ENST00000406134 PSMA8Q8TAA3 256 aa9.4□□□□□ -0.9
MSH2-202ENST00000406134 NXPE3Q969Y0 559 aa9.4□□□□□ -0.9
MSH2-202ENST00000406134 ITPKCQ96DU7 683 aa9.4□□□□□ -0.9
MSH2-202ENST00000406134 DHRS1Q96LJ7 313 aa9.4□□□□□ -0.9
MSH2-202ENST00000406134 EHD1Q9H4M9 534 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms