RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 NPLQ9BXD5 320 aaPredicted RBP14.38□□□□□ -0.11
TPM1-207ENST00000403994 REXO4Q9GZR2 422 aaKnown RBP14.38□□□□□ -0.11
TPM1-207ENST00000403994 NUDT4Q9NZJ9 180 aa14.38□□□□□ -0.11
TPM1-207ENST00000403994 SEC14L3Q9UDX4 400 aa14.38□□□□□ -0.11
TPM1-207ENST00000403994 CLDN16Q9Y5I7 305 aa14.38□□□□□ -0.11
TPM1-207ENST00000403994 A0A088AWK7 358 aa14.37□□□□□ -0.11
TPM1-207ENST00000403994 A0A1B0GUH1 482 aa14.37□□□□□ -0.11
TPM1-207ENST00000403994 ASPDHA6ND91 283 aa14.37□□□□□ -0.11
TPM1-207ENST00000403994 ANKDD1BA6NHY2 528 aa14.37□□□□□ -0.11
TPM1-207ENST00000403994 A8MUA0 341 aa14.37□□□□□ -0.11
TPM1-207ENST00000403994 B3GALT2O43825 422 aa14.37□□□□□ -0.11
TPM1-207ENST00000403994 CCNT2O60583 730 aaKnown RBP14.37□□□□□ -0.11
TPM1-207ENST00000403994 KERAO60938 352 aa14.37□□□□□ -0.11
TPM1-207ENST00000403994 SLC25A12O75746 678 aa14.37□□□□□ -0.11
TPM1-207ENST00000403994 TFEBP19484 476 aa14.37□□□□□ -0.11
TPM1-207ENST00000403994 ZNF10P21506 573 aaPredicted RBP14.37□□□□□ -0.11
TPM1-207ENST00000403994 EEF1DP29692 281 aaKnown RBP14.37□□□□□ -0.11
TPM1-207ENST00000403994 HPDP32754 393 aaPredicted RBP14.37□□□□□ -0.11
TPM1-207ENST00000403994 KCNC1P48547 511 aa14.37□□□□□ -0.11
TPM1-207ENST00000403994 RAB38P57729 211 aa14.37□□□□□ -0.11
TPM1-207ENST00000403994 OC90Q02509 493 aaPredicted RBP14.37□□□□□ -0.11
TPM1-207ENST00000403994 SPINK14Q6IE38 97 aa14.37□□□□□ -0.11
TPM1-207ENST00000403994 TRIM40Q6P9F5 258 aa14.37□□□□□ -0.11
TPM1-207ENST00000403994 RAPH1Q70E73 1250 aa14.37□□□□□ -0.11
TPM1-207ENST00000403994 RPS19BP1Q86WX3 136 aaKnown RBP14.37□□□□□ -0.11
TPM1-207ENST00000403994 TMEM178AQ8NBL3 297 aa14.37□□□□□ -0.11
TPM1-207ENST00000403994 APCDD1LQ8NCL9 501 aa14.37□□□□□ -0.11
TPM1-207ENST00000403994 RELTQ969Z4 430 aa14.37□□□□□ -0.11
TPM1-207ENST00000403994 ATOH8Q96SQ7 321 aa14.37□□□□□ -0.11
TPM1-207ENST00000403994 CSF3RQ99062 836 aa14.37□□□□□ -0.11
TPM1-207ENST00000403994 CDCP1Q9H5V8 836 aa14.37□□□□□ -0.11
TPM1-207ENST00000403994 IGSF5Q9NSI5 407 aa14.37□□□□□ -0.11
TPM1-207ENST00000403994 ZNF490Q9ULM2 529 aaPredicted RBP14.37□□□□□ -0.11
TPM1-207ENST00000403994 PCNX1Q96RV3 2341 aa14.36□□□□□ -0.11
TPM1-207ENST00000403994 CACNA1DQ01668 2161 aa14.36□□□□□ -0.11
TPM1-207ENST00000403994 TRBV11-1A0A0K0K1C0 115 aa14.36□□□□□ -0.11
TPM1-207ENST00000403994 SUPT3HB4E1H0 165 aa14.36□□□□□ -0.11
TPM1-207ENST00000403994 UBXN8O00124 270 aa14.36□□□□□ -0.11
TPM1-207ENST00000403994 SUPT3HO75486 399 aa14.36□□□□□ -0.11
TPM1-207ENST00000403994 WISP2O76076 250 aa14.36□□□□□ -0.11
TPM1-207ENST00000403994 MYO1DO94832 1006 aa14.36□□□□□ -0.11
TPM1-207ENST00000403994 CD46P15529 392 aa14.36□□□□□ -0.11
TPM1-207ENST00000403994 PPP2R1BP30154 601 aa14.36□□□□□ -0.11
TPM1-207ENST00000403994 HSD17B7P56937 341 aa14.36□□□□□ -0.11
TPM1-207ENST00000403994 MLF1P58340 268 aa14.36□□□□□ -0.11
TPM1-207ENST00000403994 GUCY2DQ02846 1103 aa14.36□□□□□ -0.11
TPM1-207ENST00000403994 BMPR2Q13873 1038 aa14.36□□□□□ -0.11
TPM1-207ENST00000403994 E2F2Q14209 437 aa14.36□□□□□ -0.11
TPM1-207ENST00000403994 TBCCQ15814 346 aa14.36□□□□□ -0.11
TPM1-207ENST00000403994 C8orf74Q6P047 294 aa14.36□□□□□ -0.11
TPM1-207ENST00000403994 ABHD17CQ6PCB6 329 aa14.36□□□□□ -0.11
TPM1-207ENST00000403994 GALNTL5Q7Z4T8 443 aa14.36□□□□□ -0.11
TPM1-207ENST00000403994 TBC1D1Q86TI0 1168 aaPredicted RBP14.36□□□□□ -0.11
TPM1-207ENST00000403994 CENPLQ8N0S6 344 aaPredicted RBP14.36□□□□□ -0.11
TPM1-207ENST00000403994 ARMC10Q8N2F6 343 aa14.36□□□□□ -0.11
TPM1-207ENST00000403994 HORMAD2Q8N7B1 307 aa14.36□□□□□ -0.11
TPM1-207ENST00000403994 B3GNT7Q8NFL0 401 aa14.36□□□□□ -0.11
TPM1-207ENST00000403994 CD244Q9BZW8 370 aa14.36□□□□□ -0.11
TPM1-207ENST00000403994 TSPAN10Q9H1Z9 355 aaPredicted RBP14.36□□□□□ -0.11
TPM1-207ENST00000403994 COPS7BQ9H9Q2 264 aaPredicted RBP14.36□□□□□ -0.11
TPM1-207ENST00000403994 LRFN1Q9P244 771 aa14.36□□□□□ -0.11
TPM1-207ENST00000403994 NCOA6Q14686 2063 aaPredicted RBP14.35□□□□□ -0.11
TPM1-207ENST00000403994 TRGV8A0A0C4DH27 118 aa14.35□□□□□ -0.11
TPM1-207ENST00000403994 CDK2AP1O14519 115 aa14.35□□□□□ -0.11
TPM1-207ENST00000403994 NME2P1O60361 137 aa14.35□□□□□ -0.11
TPM1-207ENST00000403994 SP1P08047 785 aa14.35□□□□□ -0.11
TPM1-207ENST00000403994 LTA4HP09960 611 aaKnown RBP14.35□□□□□ -0.11
TPM1-207ENST00000403994 NME2P22392 152 aa14.35□□□□□ -0.11
TPM1-207ENST00000403994 CRABP2P29373 138 aa14.35□□□□□ -0.11
TPM1-207ENST00000403994 CA7P43166 264 aa14.35□□□□□ -0.11
TPM1-207ENST00000403994 MSH2P43246 934 aa14.35□□□□□ -0.11
TPM1-207ENST00000403994 MTTPP55157 894 aa14.35□□□□□ -0.11
TPM1-207ENST00000403994 LIM2P55344 173 aa14.35□□□□□ -0.11
TPM1-207ENST00000403994 IRF9Q00978 393 aa14.35□□□□□ -0.11
TPM1-207ENST00000403994 SLC7A5Q01650 507 aa14.35□□□□□ -0.11
TPM1-207ENST00000403994 IRF8Q02556 426 aa14.35□□□□□ -0.11
TPM1-207ENST00000403994 CKAP4Q07065 602 aaKnown RBP14.35□□□□□ -0.11
TPM1-207ENST00000403994 CHIT1Q13231 466 aa14.35□□□□□ -0.11
TPM1-207ENST00000403994 PAGE2BQ5JRK9 111 aa14.35□□□□□ -0.11
TPM1-207ENST00000403994 ZNF793Q6ZN11 406 aa14.35□□□□□ -0.11
TPM1-207ENST00000403994 CLNKQ7Z7G1 428 aa14.35□□□□□ -0.11
TPM1-207ENST00000403994 ISCA2Q86U28 154 aa14.35□□□□□ -0.11
TPM1-207ENST00000403994 ZNF227Q86WZ6 799 aa14.35□□□□□ -0.11
TPM1-207ENST00000403994 SIAH3Q8IW03 269 aa14.35□□□□□ -0.11
TPM1-207ENST00000403994 ZNF595Q8IYB9 648 aa14.35□□□□□ -0.11
TPM1-207ENST00000403994 STAG3L4Q8TBR4 150 aa14.35□□□□□ -0.11
TPM1-207ENST00000403994 GPR137Q96N19 417 aa14.35□□□□□ -0.11
TPM1-207ENST00000403994 KCNC2Q96PR1 638 aa14.35□□□□□ -0.11
TPM1-207ENST00000403994 F2RL3Q96RI0 385 aa14.35□□□□□ -0.11
TPM1-207ENST00000403994 SERINC2Q96SA4 455 aa14.35□□□□□ -0.11
TPM1-207ENST00000403994 MS4A8Q9BY19 250 aa14.35□□□□□ -0.11
TPM1-207ENST00000403994 DEFB126Q9BYW3 111 aa14.35□□□□□ -0.11
TPM1-207ENST00000403994 TRIM45Q9H8W5 580 aaPredicted RBP14.35□□□□□ -0.11
TPM1-207ENST00000403994 NMRAL1Q9HBL8 299 aa14.35□□□□□ -0.11
TPM1-207ENST00000403994 PRTFDC1Q9NRG1 225 aa14.35□□□□□ -0.11
TPM1-207ENST00000403994 PNO1Q9NRX1 252 aaKnown RBP14.35□□□□□ -0.11
TPM1-207ENST00000403994 ZDHHC18Q9NUE0 388 aa14.35□□□□□ -0.11
TPM1-207ENST00000403994 ZNF223Q9UK11 482 aaPredicted RBP14.35□□□□□ -0.11
TPM1-207ENST00000403994 DAPP1Q9UN19 280 aa14.35□□□□□ -0.11
TPM1-207ENST00000403994 PPIEQ9UNP9 301 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms