RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 PHKG1Q16816 387 aa11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 CATSPEREQ5SY80 951 aa11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 RIPPLY2Q5TAB7 128 aa11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 MEI1Q5TIA1 1274 aa11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 KIAA0930Q6ICG6 404 aaPredicted RBP11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 NEPROQ6NW34 567 aa11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 ADGRD1Q6QNK2 874 aa11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 AGTRAPQ6RW13 159 aa11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 SDCCAG8Q86SQ7 713 aaPredicted RBP11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 C17orf64Q86WR6 236 aa11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 SCUBE1Q8IWY4 988 aa11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 CCDC170Q8IYT3 715 aa11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 VWA5B2Q8N398 1253 aa11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 NT5CQ8TCD5 201 aa11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 CREB3L4Q8TEY5 395 aa11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 FAM222BQ8WU58 562 aa11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 NUDT8Q8WV74 236 aa11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 ALKBH8Q96BT7 664 aaKnown RBP11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 PYCR2Q96C36 320 aa11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 SCYL1Q96KG9 808 aa11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 CAPZA3Q96KX2 299 aa11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 RASL10BQ96S79 203 aa11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 EIF2B3Q9NR50 452 aaKnown RBP11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 TUBA8Q9NY65 449 aaPredicted RBP11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 KLHL42Q9P2K6 505 aa11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 AMFRQ9UKV5 643 aa11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 YARS2Q9Y2Z4 477 aaKnown RBP11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 EPN1Q9Y6I3 576 aaPredicted RBP11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 SVEP1Q4LDE5 3571 aa11□□□□□ -0.65
SPTLC1P3-201ENST00000403408 ATP6AP2A0A1C7CYW4 349 aa11□□□□□ -0.65
SPTLC1P3-201ENST00000403408 A8MVJ9 347 aa11□□□□□ -0.65
SPTLC1P3-201ENST00000403408 WWP2O00308 870 aa11□□□□□ -0.65
SPTLC1P3-201ENST00000403408 ATP6AP2O75787 350 aa11□□□□□ -0.65
SPTLC1P3-201ENST00000403408 SERPIND1P05546 499 aa11□□□□□ -0.65
SPTLC1P3-201ENST00000403408 CCL3P10147 92 aa11□□□□□ -0.65
SPTLC1P3-201ENST00000403408 TACR1P25103 407 aa11□□□□□ -0.65
SPTLC1P3-201ENST00000403408 SCTRP47872 440 aa11□□□□□ -0.65
SPTLC1P3-201ENST00000403408 PGGT1BP53609 377 aa11□□□□□ -0.65
SPTLC1P3-201ENST00000403408 PWP1Q13610 501 aa11□□□□□ -0.65
SPTLC1P3-201ENST00000403408 SPA17Q15506 151 aa11□□□□□ -0.65
SPTLC1P3-201ENST00000403408 HYAL4Q2M3T9 481 aa11□□□□□ -0.65
SPTLC1P3-201ENST00000403408 FBXL19-AS1Q494R0 122 aa11□□□□□ -0.65
SPTLC1P3-201ENST00000403408 RNF187Q5TA31 235 aaPredicted RBP11□□□□□ -0.65
SPTLC1P3-201ENST00000403408 PAOXQ6QHF9 649 aa11□□□□□ -0.65
SPTLC1P3-201ENST00000403408 LCTLQ6UWM7 567 aa11□□□□□ -0.65
SPTLC1P3-201ENST00000403408 PEX26Q7Z412 305 aa11□□□□□ -0.65
SPTLC1P3-201ENST00000403408 AGGF1Q8N302 714 aaeCLIP11□□□□□ -0.65
SPTLC1P3-201ENST00000403408 FAM109AQ8N4B1 249 aa11□□□□□ -0.65
SPTLC1P3-201ENST00000403408 TNIP2Q8NFZ5 429 aa11□□□□□ -0.65
SPTLC1P3-201ENST00000403408 SPATA3Q8NHX4 192 aa11□□□□□ -0.65
SPTLC1P3-201ENST00000403408 LINC01560Q8TB33 94 aa11□□□□□ -0.65
SPTLC1P3-201ENST00000403408 EEF1AKMT1Q8WVE0 214 aa11□□□□□ -0.65
SPTLC1P3-201ENST00000403408 VMP1Q96GC9 406 aa11□□□□□ -0.65
SPTLC1P3-201ENST00000403408 HES6Q96HZ4 224 aa11□□□□□ -0.65
SPTLC1P3-201ENST00000403408 COX4I2Q96KJ9 171 aa11□□□□□ -0.65
SPTLC1P3-201ENST00000403408 AARSD1Q9BTE6 412 aaKnown RBP11□□□□□ -0.65
SPTLC1P3-201ENST00000403408 IL1RL2Q9HB29 575 aa11□□□□□ -0.65
SPTLC1P3-201ENST00000403408 PROK2Q9HC23 129 aa11□□□□□ -0.65
SPTLC1P3-201ENST00000403408 PNO1Q9NRX1 252 aaKnown RBP11□□□□□ -0.65
SPTLC1P3-201ENST00000403408 HPF1Q9NWY4 346 aa11□□□□□ -0.65
SPTLC1P3-201ENST00000403408 ALKBH4Q9NXW9 302 aa11□□□□□ -0.65
SPTLC1P3-201ENST00000403408 BFARQ9NZS9 450 aa11□□□□□ -0.65
SPTLC1P3-201ENST00000403408 PAK5Q9P286 719 aa11□□□□□ -0.65
SPTLC1P3-201ENST00000403408 ACAD8Q9UKU7 415 aa11□□□□□ -0.65
SPTLC1P3-201ENST00000403408 ERVK-11Q9UQG0 969 aa11□□□□□ -0.65
SPTLC1P3-201ENST00000403408 ZNF148Q9UQR1 794 aa11□□□□□ -0.65
SPTLC1P3-201ENST00000403408 TRBC2A0A5B9 178 aa10.99□□□□□ -0.65
SPTLC1P3-201ENST00000403408 CLDN4O14493 209 aa10.99□□□□□ -0.65
SPTLC1P3-201ENST00000403408 SUSD5O60279 629 aa10.99□□□□□ -0.65
SPTLC1P3-201ENST00000403408 WDR1O75083 606 aa10.99□□□□□ -0.65
SPTLC1P3-201ENST00000403408 PTMAP06454 111 aaKnown RBP10.99□□□□□ -0.65
SPTLC1P3-201ENST00000403408 RNH1P13489 461 aaKnown RBP10.99□□□□□ -0.65
SPTLC1P3-201ENST00000403408 CNR1P21554 472 aa10.99□□□□□ -0.65
SPTLC1P3-201ENST00000403408 HK2P52789 917 aa10.99□□□□□ -0.65
SPTLC1P3-201ENST00000403408 DCAF7P61962 342 aa10.99□□□□□ -0.65
SPTLC1P3-201ENST00000403408 KEAP1Q14145 624 aa10.99□□□□□ -0.65
SPTLC1P3-201ENST00000403408 ZNF470Q6ECI4 717 aa10.99□□□□□ -0.65
SPTLC1P3-201ENST00000403408 RGS9BPQ6ZS82 235 aa10.99□□□□□ -0.65
SPTLC1P3-201ENST00000403408 SLC22A16Q86VW1 577 aa10.99□□□□□ -0.65
SPTLC1P3-201ENST00000403408 ULK2Q8IYT8 1036 aa10.99□□□□□ -0.65
SPTLC1P3-201ENST00000403408 KCNJ9Q92806 393 aa10.99□□□□□ -0.65
SPTLC1P3-201ENST00000403408 RNASE6Q93091 150 aaKnown RBP10.99□□□□□ -0.65
SPTLC1P3-201ENST00000403408 SH2D2AQ9NP31 389 aa10.99□□□□□ -0.65
SPTLC1P3-201ENST00000403408 MYOTQ9UBF9 498 aa10.99□□□□□ -0.65
SPTLC1P3-201ENST00000403408 IKZF3Q9UKT9 509 aa10.99□□□□□ -0.65
SPTLC1P3-201ENST00000403408 ATG4BQ9Y4P1 393 aa10.99□□□□□ -0.65
SPTLC1P3-201ENST00000403408 ABCA1O95477 2261 aa10.98□□□□□ -0.65
SPTLC1P3-201ENST00000403408 A0A0G2JN53 185 aa10.98□□□□□ -0.65
SPTLC1P3-201ENST00000403408 ZCWPW2A0A1B0GU75 182 aa10.98□□□□□ -0.65
SPTLC1P3-201ENST00000403408 INAFM1C9JVW0 142 aa10.98□□□□□ -0.65
SPTLC1P3-201ENST00000403408 H7C1Q1 480 aa10.98□□□□□ -0.65
SPTLC1P3-201ENST00000403408 ACOT7O00154 380 aa10.98□□□□□ -0.65
SPTLC1P3-201ENST00000403408 ZFAND5O76080 213 aa10.98□□□□□ -0.65
SPTLC1P3-201ENST00000403408 HAUS5O94927 633 aa10.98□□□□□ -0.65
SPTLC1P3-201ENST00000403408 TBX6O95947 436 aaPredicted RBP10.98□□□□□ -0.65
SPTLC1P3-201ENST00000403408 HRGP04196 525 aa10.98□□□□□ -0.65
SPTLC1P3-201ENST00000403408 EPXP11678 715 aa10.98□□□□□ -0.65
SPTLC1P3-201ENST00000403408 ENO3P13929 434 aaPredicted RBP10.98□□□□□ -0.65
SPTLC1P3-201ENST00000403408 BMP5P22003 454 aa10.98□□□□□ -0.65
SPTLC1P3-201ENST00000403408 CEACAM8P31997 349 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms