RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 EPHA3P29320 983 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 SLC8A1P32418 973 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 SLC7A2P52569 658 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 ARSFP54793 590 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 SKP1P63208 163 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 SP3Q02447 781 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 LSAMPQ13449 338 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 RAB39AQ14964 217 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 PDK2Q15119 407 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 ZBTB6Q15916 424 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 IFI44LQ53G44 452 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 C6orf163Q5TEZ5 329 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 SLC26A9Q7LBE3 791 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 PRSS42Q7Z5A4 293 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 TAC4Q86UU9 113 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 FAM35AQ86V20 835 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 ZNF781Q8N8C0 355 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 ICA1LQ8NDH6 482 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 NDNFQ8TB73 568 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 IRGQQ8WZA9 623 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 ST6GALNAC6Q969X2 333 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 MYLPFQ96A32 169 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 NSL1Q96IY1 281 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 QKIQ96PU8 341 aaKnown RBP eCLIP5.96□□□□□ -1.461e-6■■■■□ 26.5
TRAPPC13-202ENST00000399438 ZNF670Q9BS34 389 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 PKIBQ9C010 78 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 OSGEPL1Q9H4B0 414 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 ZFP57Q9NU63 452 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 OR12D3Q9UGF7 316 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 PLAGL1Q9UM63 463 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 PADI2Q9Y2J8 665 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 EDDM13A0A1B0GTR0 161 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 ARL5CA6NH57 179 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 MATN3O15232 486 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 PLRG1O43660 514 aaKnown RBP5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 SELENOFO60613 162 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 STAG3L2P0CL84 134 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 COX7A2P14406 83 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 EPHA1P21709 976 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 MAOBP27338 520 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 SERPINH1P50454 418 aaKnown RBP5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 RASSF2P50749 326 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 ATP1A4Q13733 1029 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 BEX5Q5H9J7 111 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 Q6ZVL8 140 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 BZW1Q7L1Q6 419 aaKnown RBP5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 TRMT11Q7Z4G4 463 aaKnown RBP5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 RAB44Q7Z6P3 723 aaPredicted RBP5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 ABI3BPQ7Z7G0 1075 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 CRLF3Q8IUI8 442 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 MISPQ8IVT2 679 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 ST13P4Q8IZP2 240 aaPredicted RBP5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 RYBPQ8N488 228 aaPredicted RBP5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 B4GALNT2Q8NHY0 566 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 KCTD4Q8WVF5 259 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 GFM2Q969S9 779 aaKnown RBP5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 COQ10AQ96MF6 247 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 MCOLN1Q9GZU1 580 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 HRH4Q9H3N8 390 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 RNPEPL1Q9HAU8 725 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 C12orf10Q9HB07 376 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 MKKSQ9NPJ1 570 aaPredicted RBP5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 CASP8AP2Q9UKL3 1982 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 MYOCOSA0A1B0GUC4 107 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 KANSL1LA0AUZ9 987 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 UBA6A0AVT1 1052 aaPredicted RBP5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 BCLAF3A2AJT9 711 aaKnown RBP5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 SDR42E2A6NKP2 422 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 AIM2O14862 343 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 VAPBO95292 243 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 LY86O95711 162 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 CER1O95813 267 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 BPGMP07738 259 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 PRSS56P0CW18 603 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 CPOXP36551 454 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 RANBP1P43487 201 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 SUOXP51687 545 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 PKNOX1P55347 436 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 P2RX3P56373 397 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 POU4F2Q12837 409 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 DYRK1AQ13627 763 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 DCAF4L1Q3SXM0 396 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 SLC25A52Q3SY17 297 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 PDLIM3Q53GG5 364 aaPredicted RBP5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 LDLRAP1Q5SW96 308 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 WLSQ5T9L3 541 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 ZNF468Q5VIY5 522 aaPredicted RBP5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 C1orf146Q5VVC0 180 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 LPCAT4Q643R3 524 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 HMBOX1Q6NT76 420 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 CADM4Q8NFZ8 388 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 OR56B1Q8NGI3 324 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 PPP4R1Q8TF05 950 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 PABPC5Q96DU9 382 aaKnown RBP5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 ELMOD3Q96FG2 381 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 OR52B2Q96RD2 323 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 DUSP16Q9BY84 665 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 NUF2Q9BZD4 464 aa5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 SOX17Q9H6I2 414 aaPredicted RBP5.95□□□□□ -1.46
TRAPPC13-202ENST00000399438 MED20Q9H944 212 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms