RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 ELP5Q8TE02 316 aa13.95□□□□□ -0.18
SMIM11A-203ENST00000399299 SSC4DQ8WTU2 575 aa13.95□□□□□ -0.18
SMIM11A-203ENST00000399299 IFT81Q8WYA0 676 aa13.95□□□□□ -0.18
SMIM11A-203ENST00000399299 PSMG3-AS1Q96PY0 264 aa13.95□□□□□ -0.18
SMIM11A-203ENST00000399299 SERINC2Q96SA4 455 aa13.95□□□□□ -0.18
SMIM11A-203ENST00000399299 SLX1AQ9BQ83 275 aa13.95□□□□□ -0.18
SMIM11A-203ENST00000399299 MS4A8Q9BY19 250 aa13.95□□□□□ -0.18
SMIM11A-203ENST00000399299 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.95□□□□□ -0.18
SMIM11A-203ENST00000399299 ABI3Q9P2A4 366 aa13.95□□□□□ -0.18
SMIM11A-203ENST00000399299 PCDHGB6Q9Y5F9 930 aa13.95□□□□□ -0.18
SMIM11A-203ENST00000399299 A0A0G2JN53 185 aa13.94□□□□□ -0.18
SMIM11A-203ENST00000399299 FAM227AF5H4B4 570 aa13.94□□□□□ -0.18
SMIM11A-203ENST00000399299 KLK8O60259 260 aa13.94□□□□□ -0.18
SMIM11A-203ENST00000399299 PRAMEF2O60811 474 aa13.94□□□□□ -0.18
SMIM11A-203ENST00000399299 SEMA7AO75326 666 aa13.94□□□□□ -0.18
SMIM11A-203ENST00000399299 MAOAP21397 527 aa13.94□□□□□ -0.18
SMIM11A-203ENST00000399299 CNTFP26441 200 aa13.94□□□□□ -0.18
SMIM11A-203ENST00000399299 MAGEA12P43365 314 aa13.94□□□□□ -0.18
SMIM11A-203ENST00000399299 PLA2G16P53816 162 aa13.94□□□□□ -0.18
SMIM11A-203ENST00000399299 ALDH18A1P54886 795 aaKnown RBP13.94□□□□□ -0.18
SMIM11A-203ENST00000399299 MTTPP55157 894 aa13.94□□□□□ -0.18
SMIM11A-203ENST00000399299 HSD17B7P56937 341 aa13.94□□□□□ -0.18
SMIM11A-203ENST00000399299 RAB38P57729 211 aa13.94□□□□□ -0.18
SMIM11A-203ENST00000399299 RUNX2Q13950 521 aa13.94□□□□□ -0.18
SMIM11A-203ENST00000399299 RCN2Q14257 317 aa13.94□□□□□ -0.18
SMIM11A-203ENST00000399299 TERF2Q15554 542 aa13.94□□□□□ -0.18
SMIM11A-203ENST00000399299 ZNF324BQ6AW86 544 aaPredicted RBP13.94□□□□□ -0.18
SMIM11A-203ENST00000399299 METTL2BQ6P1Q9 378 aaKnown RBP13.94□□□□□ -0.18
SMIM11A-203ENST00000399299 MED27Q6P2C8 311 aa13.94□□□□□ -0.18
SMIM11A-203ENST00000399299 TAOK1Q7L7X3 1001 aa13.94□□□□□ -0.18
SMIM11A-203ENST00000399299 CRLF3Q8IUI8 442 aa13.94□□□□□ -0.18
SMIM11A-203ENST00000399299 ZNF595Q8IYB9 648 aa13.94□□□□□ -0.18
SMIM11A-203ENST00000399299 CEP112Q8N8E3 955 aa13.94□□□□□ -0.18
SMIM11A-203ENST00000399299 PRR7Q8TB68 274 aa13.94□□□□□ -0.18
SMIM11A-203ENST00000399299 ZNF473Q8WTR7 871 aaKnown RBP13.94□□□□□ -0.18
SMIM11A-203ENST00000399299 GPR78Q96P69 363 aa13.94□□□□□ -0.18
SMIM11A-203ENST00000399299 KCNC2Q96PR1 638 aa13.94□□□□□ -0.18
SMIM11A-203ENST00000399299 PAFAH2Q99487 392 aa13.94□□□□□ -0.18
SMIM11A-203ENST00000399299 NPAS2Q99743 824 aa13.94□□□□□ -0.18
SMIM11A-203ENST00000399299 ROGDIQ9GZN7 287 aa13.94□□□□□ -0.18
SMIM11A-203ENST00000399299 COPS7BQ9H9Q2 264 aaPredicted RBP13.94□□□□□ -0.18
SMIM11A-203ENST00000399299 NECTIN3Q9NQS3 549 aa13.94□□□□□ -0.18
SMIM11A-203ENST00000399299 ADGRE2Q9UHX3 823 aa13.94□□□□□ -0.18
SMIM11A-203ENST00000399299 DAPP1Q9UN19 280 aa13.94□□□□□ -0.18
SMIM11A-203ENST00000399299 MRPS33Q9Y291 106 aaKnown RBP13.94□□□□□ -0.18
SMIM11A-203ENST00000399299 ICE1Q9Y2F5 2266 aa13.94□□□□□ -0.18
SMIM11A-203ENST00000399299 ZGRF1Q86YA3 2104 aa13.94□□□□□ -0.18
SMIM11A-203ENST00000399299 UNC79Q9P2D8 2635 aa13.93□□□□□ -0.18
SMIM11A-203ENST00000399299 BLACEA4D250 179 aa13.93□□□□□ -0.18
SMIM11A-203ENST00000399299 CLDN4O14493 209 aa13.93□□□□□ -0.18
SMIM11A-203ENST00000399299 UGDHO60701 494 aa13.93□□□□□ -0.18
SMIM11A-203ENST00000399299 KRT38O76015 456 aa13.93□□□□□ -0.18
SMIM11A-203ENST00000399299 DDAH2O95865 285 aa13.93□□□□□ -0.18
SMIM11A-203ENST00000399299 F10P00742 488 aa13.93□□□□□ -0.18
SMIM11A-203ENST00000399299 GP1BBP13224 206 aa13.93□□□□□ -0.18
SMIM11A-203ENST00000399299 GFAPP14136 432 aa13.93□□□□□ -0.18
SMIM11A-203ENST00000399299 CERS1P27544 350 aa13.93□□□□□ -0.18
SMIM11A-203ENST00000399299 MSH2P43246 934 aa13.93□□□□□ -0.18
SMIM11A-203ENST00000399299 PCBP2Q15366 365 aaKnown RBP eCLIP13.93□□□□□ -0.18
SMIM11A-203ENST00000399299 PFKFB4Q16877 469 aa13.93□□□□□ -0.18
SMIM11A-203ENST00000399299 TMEM35AQ53FP2 167 aa13.93□□□□□ -0.18
SMIM11A-203ENST00000399299 TECRLQ5HYJ1 363 aa13.93□□□□□ -0.18
SMIM11A-203ENST00000399299 GRHL2Q6ISB3 625 aa13.93□□□□□ -0.18
SMIM11A-203ENST00000399299 BEST3Q8N1M1 668 aa13.93□□□□□ -0.18
SMIM11A-203ENST00000399299 ARMC10Q8N2F6 343 aa13.93□□□□□ -0.18
SMIM11A-203ENST00000399299 TEX9Q8N6V9 391 aa13.93□□□□□ -0.18
SMIM11A-203ENST00000399299 NFAM1Q8NET5 270 aaPredicted RBP13.93□□□□□ -0.18
SMIM11A-203ENST00000399299 OR7G3Q8NG95 312 aa13.93□□□□□ -0.18
SMIM11A-203ENST00000399299 MAGEB10Q96LZ2 347 aaPredicted RBP13.93□□□□□ -0.18
SMIM11A-203ENST00000399299 TAAR6Q96RI8 345 aa13.93□□□□□ -0.18
SMIM11A-203ENST00000399299 TBCDQ9BTW9 1192 aa13.93□□□□□ -0.18
SMIM11A-203ENST00000399299 PRDM7Q9NQW5 492 aa13.93□□□□□ -0.18
SMIM11A-203ENST00000399299 PRTFDC1Q9NRG1 225 aa13.93□□□□□ -0.18
SMIM11A-203ENST00000399299 OLAHQ9NV23 265 aa13.93□□□□□ -0.18
SMIM11A-203ENST00000399299 ZNF180Q9UJW8 692 aa13.93□□□□□ -0.18
SMIM11A-203ENST00000399299 TSC22D4Q9Y3Q8 395 aa13.93□□□□□ -0.18
SMIM11A-203ENST00000399299 TNPO3Q9Y5L0 923 aaKnown RBP13.93□□□□□ -0.18
SMIM11A-203ENST00000399299 IKBKGQ9Y6K9 419 aa13.93□□□□□ -0.18
SMIM11A-203ENST00000399299 A0A087WUV0 522 aaPredicted RBP13.92□□□□□ -0.18
SMIM11A-203ENST00000399299 CYR61O00622 381 aa13.92□□□□□ -0.18
SMIM11A-203ENST00000399299 SCELO95171 688 aa13.92□□□□□ -0.18
SMIM11A-203ENST00000399299 PIK3CBP42338 1070 aa13.92□□□□□ -0.18
SMIM11A-203ENST00000399299 PIK3CGP48736 1102 aa13.92□□□□□ -0.18
SMIM11A-203ENST00000399299 TDGF1P3P51864 188 aa13.92□□□□□ -0.18
SMIM11A-203ENST00000399299 LIM2P55344 173 aa13.92□□□□□ -0.18
SMIM11A-203ENST00000399299 TUBA3CQ13748 450 aa13.92□□□□□ -0.18
SMIM11A-203ENST00000399299 LIPJQ5W064 366 aa13.92□□□□□ -0.18
SMIM11A-203ENST00000399299 FCRLBQ6BAA4 426 aa13.92□□□□□ -0.18
SMIM11A-203ENST00000399299 TUBA3EQ6PEY2 450 aa13.92□□□□□ -0.18
SMIM11A-203ENST00000399299 CHSY3Q70JA7 882 aa13.92□□□□□ -0.18
SMIM11A-203ENST00000399299 CYP4X1Q8N118 509 aa13.92□□□□□ -0.18
SMIM11A-203ENST00000399299 MDS2Q8NDY4 140 aa13.92□□□□□ -0.18
SMIM11A-203ENST00000399299 DNAJB8Q8NHS0 232 aa13.92□□□□□ -0.18
SMIM11A-203ENST00000399299 NR4A3Q92570 626 aa13.92□□□□□ -0.18
SMIM11A-203ENST00000399299 F2RL3Q96RI0 385 aa13.92□□□□□ -0.18
SMIM11A-203ENST00000399299 UTP23Q9BRU9 249 aaKnown RBP13.92□□□□□ -0.18
SMIM11A-203ENST00000399299 VPS11Q9H270 941 aa13.92□□□□□ -0.18
SMIM11A-203ENST00000399299 LYRM4Q9HD34 91 aa13.92□□□□□ -0.18
SMIM11A-203ENST00000399299 PPIEQ9UNP9 301 aaKnown RBP13.92□□□□□ -0.18
SMIM11A-203ENST00000399299 SLC5A6Q9Y289 635 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms