RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 WDFY2Q96P53 400 aa13.4□□□□□ -0.26
APOB-202ENST00000399256 STUB1Q9UNE7 303 aa13.4□□□□□ -0.26
APOB-202ENST00000399256 CORO2BQ9UQ03 480 aa13.4□□□□□ -0.26
APOB-202ENST00000399256 RUVBL1Q9Y265 456 aaKnown RBP13.4□□□□□ -0.26
APOB-202ENST00000399256 LSM2Q9Y333 95 aaKnown RBP13.4□□□□□ -0.26
APOB-202ENST00000399256 HTTP42858 3142 aa13.4□□□□□ -0.26
APOB-202ENST00000399256 A0A1W2PQL4 384 aaPredicted RBP13.39□□□□□ -0.27
APOB-202ENST00000399256 PLD2O14939 933 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 ANXA4P09525 319 aaPredicted RBP13.39□□□□□ -0.27
APOB-202ENST00000399256 PTX3P26022 381 aaPredicted RBP13.39□□□□□ -0.27
APOB-202ENST00000399256 CSTF2P33240 577 aaKnown RBP eCLIP13.39□□□□□ -0.27
APOB-202ENST00000399256 DSC1Q08554 894 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 MRPL58Q14197 206 aaKnown RBP13.39□□□□□ -0.27
APOB-202ENST00000399256 WDR53Q7Z5U6 358 aaPredicted RBP13.39□□□□□ -0.27
APOB-202ENST00000399256 VPS37AQ8NEZ2 397 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 ENKURQ8TC29 256 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 CHTF18Q8WVB6 975 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 MAPKAP1Q9BPZ7 522 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 TTLL2Q9BWV7 592 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 SLC12A9Q9BXP2 914 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 GPR62Q9BZJ7 368 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 POLR2J2Q9GZM3 115 aaKnown RBP13.39□□□□□ -0.27
APOB-202ENST00000399256 NMNAT1Q9HAN9 279 aaPredicted RBP13.39□□□□□ -0.27
APOB-202ENST00000399256 TMEM39AQ9NV64 488 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 SEC14L4Q9UDX3 406 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 C2orf78A6NCI8 922 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 C12orf71A8MTZ7 269 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 COCHO43405 550 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 ZNF780AO75290 641 aaPredicted RBP13.39□□□□□ -0.27
APOB-202ENST00000399256 DUSP11O75319 330 aaKnown RBP13.39□□□□□ -0.27
APOB-202ENST00000399256 STC2O76061 302 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 AP2A2O94973 939 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 ALPPP05187 535 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 TSPAN19P0C672 248 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 CBLP22681 906 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 B4GALNT1Q00973 533 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 RHAGQ02094 409 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 QPRTQ15274 297 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 SLC35F1Q5T1Q4 408 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 LYPLAL1Q5VWZ2 237 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 SAXO2Q658L1 398 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 FRMPD2BQ6IN97 320 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 GPR65Q8IYL9 337 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 OR5H6Q8NGV6 325 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 OR5AK3PQ8NH89 298 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 PIP5K1AQ99755 562 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 BTNL2Q9UIR0 455 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 E7EQ34 232 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 NPIPB8E9PQR5 432 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 AKR7A2O43488 359 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 SMAD6O43541 496 aaKnown RBP13.39□□□□□ -0.27
APOB-202ENST00000399256 HBQ1P09105 142 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 C1SP09871 688 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 CBSLP0DN79 551 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 PPIBP23284 216 aaKnown RBP13.39□□□□□ -0.27
APOB-202ENST00000399256 GPC1P35052 558 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 CBSP35520 551 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 MLLT3P42568 568 aaPredicted RBP13.39□□□□□ -0.27
APOB-202ENST00000399256 IL12RB1P42701 662 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 NSG1P42857 185 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 PRIM2P49643 509 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 RAE1P78406 368 aaKnown RBP13.39□□□□□ -0.27
APOB-202ENST00000399256 FAPQ12884 760 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 ZNF385BQ569K4 471 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 GCNT6Q5T4J0 391 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 RFLNAQ6ZTI6 216 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 CCDC149Q6ZUS6 474 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 CHST9Q7L1S5 443 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 TAGAPQ8N103 731 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 FAM46DQ8NEK8 389 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 REPS1Q96D71 796 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 FAM193BQ96PV7 902 aaPredicted RBP13.39□□□□□ -0.27
APOB-202ENST00000399256 SRRDQ9UH36 339 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 SSR3Q9UNL2 185 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 MAP4K5Q9Y4K4 846 aa13.39□□□□□ -0.27
APOB-202ENST00000399256 DNMT3AQ9Y6K1 912 aaPredicted RBP13.39□□□□□ -0.27
APOB-202ENST00000399256 GNG14A0A1W2PPG7 69 aa13.38□□□□□ -0.27
APOB-202ENST00000399256 HYKKA2RU49 373 aa13.38□□□□□ -0.27
APOB-202ENST00000399256 SLC35F4A4IF30 521 aa13.38□□□□□ -0.27
APOB-202ENST00000399256 SMLR1H3BR10 107 aa13.38□□□□□ -0.27
APOB-202ENST00000399256 TLR4O00206 839 aa13.38□□□□□ -0.27
APOB-202ENST00000399256 PLA2G10O15496 165 aa13.38□□□□□ -0.27
APOB-202ENST00000399256 TBL1XO60907 577 aa13.38□□□□□ -0.27
APOB-202ENST00000399256 IFI30P13284 250 aa13.38□□□□□ -0.27
APOB-202ENST00000399256 IDSP22304 550 aa13.38□□□□□ -0.27
APOB-202ENST00000399256 MVDP53602 400 aa13.38□□□□□ -0.27
APOB-202ENST00000399256 PFN3P60673 137 aa13.38□□□□□ -0.27
APOB-202ENST00000399256 NKX3-2P78367 333 aa13.38□□□□□ -0.27
APOB-202ENST00000399256 ABI3BPQ7Z7G0 1075 aa13.38□□□□□ -0.27
APOB-202ENST00000399256 TRIM69Q86WT6 500 aa13.38□□□□□ -0.27
APOB-202ENST00000399256 HJURPQ8NCD3 748 aaPredicted RBP13.38□□□□□ -0.27
APOB-202ENST00000399256 NLGN4YQ8NFZ3 816 aaPredicted RBP13.38□□□□□ -0.27
APOB-202ENST00000399256 OR9Q1Q8NGQ5 310 aa13.38□□□□□ -0.27
APOB-202ENST00000399256 ZFAND1Q8TCF1 268 aa13.38□□□□□ -0.27
APOB-202ENST00000399256 VWA8A3KMH1 1905 aa13.38□□□□□ -0.27
APOB-202ENST00000399256 IQCMA0A1B0GVH7 501 aa13.38□□□□□ -0.27
APOB-202ENST00000399256 MGAT4DA6NG13 374 aa13.38□□□□□ -0.27
APOB-202ENST00000399256 ELNP15502 786 aa13.38□□□□□ -0.27
APOB-202ENST00000399256 XCR1P46094 333 aa13.38□□□□□ -0.27
APOB-202ENST00000399256 HBA1P69905 142 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms