RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 PDE9AO76083 593 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 PAK4O96013 591 aaPredicted RBP16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 DNTTP04053 509 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 ETFAP13804 333 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 PCSK6P29122 969 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 HMGA2P52926 109 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 CRYBA2P53672 197 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 PCBP3P57721 371 aaKnown RBP16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 MVKQ03426 396 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 SLC5A12Q1EHB4 618 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 PROX2Q3B8N5 592 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 C2orf27AQ580R0 203 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 REEP3Q6NUK4 255 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 CROCCP3Q8IVE0 287 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 ANKRD53Q8N9V6 530 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 SRFBP1Q8NEF9 429 aaKnown RBP16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 IPCEF1Q8WWN9 437 aaPredicted RBP16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 RASSF5Q8WWW0 418 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 C12orf66Q96MD2 445 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 RIPOR3Q96MK2 946 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 DUSP21Q9H596 190 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 GPN2Q9H9Y4 310 aaPredicted RBP16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 A4GALTQ9NPC4 353 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 TMEM184CQ9NVA4 438 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 FBXL12Q9NXK8 326 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 ZFR2Q9UPR6 939 aaKnown RBP16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 ARRDC5A6NEK1 342 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 PDPK1O15530 556 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 ANGPTL1O95841 491 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 NDUFS1P28331 727 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 AHRP35869 848 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 TSFMP43897 325 aaKnown RBP16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 DSTNP60981 165 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 IL5RAQ01344 420 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 NPRL3Q12980 569 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 NEDD8Q15843 81 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 UAP1L1Q3KQV9 507 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 SAXO2Q658L1 398 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 PPP2R2DQ66LE6 453 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 XAF1Q6GPH4 301 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 CHST15Q7LFX5 561 aaPredicted RBP16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 OR10Q1Q8NGQ4 319 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 SPPL2AQ8TCT8 520 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 GIPC3Q8TF64 312 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 CIDECQ96AQ7 238 aaPredicted RBP16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 HRASLS5Q96KN8 279 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 ZNF300Q96RE9 604 aaPredicted RBP16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 INSM2Q96T92 566 aaPredicted RBP16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 KXD1Q9BQD3 176 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 ACAT2Q9BWD1 397 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 FAIM2Q9BWQ8 316 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 CERS4Q9HA82 394 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 ZDHHC4Q9NPG8 344 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 NDUFAF4Q9P032 175 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 PLAGL1Q9UM63 463 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 ATG2AQ2TAZ0 1938 aa16.89■□□□□ 0.3
HLA-DQB1-204ENST00000399084 NUP214P35658 2090 aaPredicted RBP16.89■□□□□ 0.29
HLA-DQB1-204ENST00000399084 TMEM229AB2RXF0 380 aa16.89■□□□□ 0.29
HLA-DQB1-204ENST00000399084 H7BY64 318 aa16.89■□□□□ 0.29
HLA-DQB1-204ENST00000399084 K7EQS6 105 aa16.89■□□□□ 0.29
HLA-DQB1-204ENST00000399084 TBX6O95947 436 aaPredicted RBP16.89■□□□□ 0.29
HLA-DQB1-204ENST00000399084 GBAP04062 536 aa16.89■□□□□ 0.29
HLA-DQB1-204ENST00000399084 CEACAM5P06731 702 aa16.89■□□□□ 0.29
HLA-DQB1-204ENST00000399084 EFNA1P20827 205 aaPredicted RBP16.89■□□□□ 0.29
HLA-DQB1-204ENST00000399084 PKLRP30613 574 aa16.89■□□□□ 0.29
HLA-DQB1-204ENST00000399084 YAP1P46937 504 aaKnown RBP16.89■□□□□ 0.29
HLA-DQB1-204ENST00000399084 MANFP55145 182 aaKnown RBP16.89■□□□□ 0.29
HLA-DQB1-204ENST00000399084 CSNK1G2P78368 415 aa16.89■□□□□ 0.29
HLA-DQB1-204ENST00000399084 KCNC4Q03721 635 aa16.89■□□□□ 0.29
HLA-DQB1-204ENST00000399084 DCTN2Q13561 401 aaKnown RBP16.89■□□□□ 0.29
HLA-DQB1-204ENST00000399084 RAPSNQ13702 412 aa16.89■□□□□ 0.29
HLA-DQB1-204ENST00000399084 CTU2Q2VPK5 515 aaKnown RBP16.89■□□□□ 0.29
HLA-DQB1-204ENST00000399084 COX20Q5RI15 118 aa16.89■□□□□ 0.29
HLA-DQB1-204ENST00000399084 GPR107Q5VW38 600 aa16.89■□□□□ 0.29
HLA-DQB1-204ENST00000399084 GTF2IRD2BQ6EKJ0 949 aa16.89■□□□□ 0.29
HLA-DQB1-204ENST00000399084 USP30Q70CQ3 517 aa16.89■□□□□ 0.29
HLA-DQB1-204ENST00000399084 GTF2IRD2Q86UP8 949 aa16.89■□□□□ 0.29
HLA-DQB1-204ENST00000399084 RNF130Q86XS8 419 aa16.89■□□□□ 0.29
HLA-DQB1-204ENST00000399084 SVOPQ8N4V2 548 aa16.89■□□□□ 0.29
HLA-DQB1-204ENST00000399084 OR2A1Q8NGT9 310 aa16.89■□□□□ 0.29
HLA-DQB1-204ENST00000399084 PRAP1Q96NZ9 151 aa16.89■□□□□ 0.29
HLA-DQB1-204ENST00000399084 FANCEQ9HB96 536 aa16.89■□□□□ 0.29
HLA-DQB1-204ENST00000399084 FAM32AQ9Y421 112 aaKnown RBP16.89■□□□□ 0.29
HLA-DQB1-204ENST00000399084 OR1A2Q9Y585 309 aa16.89■□□□□ 0.29
HLA-DQB1-204ENST00000399084 COLEC10Q9Y6Z7 277 aa16.89■□□□□ 0.29
HLA-DQB1-204ENST00000399084 H3BMQ9 156 aa16.88■□□□□ 0.29
HLA-DQB1-204ENST00000399084 TNFRSF11BO00300 401 aa16.88■□□□□ 0.29
HLA-DQB1-204ENST00000399084 NDUFS4O43181 175 aa16.88■□□□□ 0.29
HLA-DQB1-204ENST00000399084 OR1F1O43749 312 aa16.88■□□□□ 0.29
HLA-DQB1-204ENST00000399084 C1QCP02747 245 aa16.88■□□□□ 0.29
HLA-DQB1-204ENST00000399084 ACP5P13686 325 aa16.88■□□□□ 0.29
HLA-DQB1-204ENST00000399084 ANXA11P50995 505 aaKnown RBP16.88■□□□□ 0.29
HLA-DQB1-204ENST00000399084 PCBP4P57723 403 aaKnown RBP16.88■□□□□ 0.29
HLA-DQB1-204ENST00000399084 FGL2Q14314 439 aa16.88■□□□□ 0.29
HLA-DQB1-204ENST00000399084 KRT33BQ14525 404 aa16.88■□□□□ 0.29
HLA-DQB1-204ENST00000399084 MLIPQ5VWP3 458 aa16.88■□□□□ 0.29
HLA-DQB1-204ENST00000399084 OR4C11Q6IEV9 310 aa16.88■□□□□ 0.29
HLA-DQB1-204ENST00000399084 PARM1Q6UWI2 310 aa16.88■□□□□ 0.29
HLA-DQB1-204ENST00000399084 WASH2PQ6VEQ5 465 aa16.88■□□□□ 0.29
HLA-DQB1-204ENST00000399084 FAM92BQ6ZTR7 304 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms